Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 85 件

5BMU
DownloadVisualize
BU of 5bmu by Molmil
The crystal structure of the GST-like domains complex of AIMP3-EPRS mutant C92SC105SC123S
分子名称: Eukaryotic translation elongation factor 1 epsilon-1, Glutamate--tRNA ligase
著者Cho, H.J, Kang, B.S.
登録日2015-05-23
公開日2015-10-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Assembly of Multi-tRNA Synthetase Complex via Heterotetrameric Glutathione Transferase-homology Domains
J.Biol.Chem., 290, 2015
6KQQ
DownloadVisualize
BU of 6kqq by Molmil
NSD1 SET domain in complex with BT3 and SAM
分子名称: 2-azanyl-6-[(2-azanyl-4-oxidanyl-1,3-benzothiazol-6-yl)disulfanyl]-1,3-benzothiazol-4-ol, 2-azanyl-6-sulfanyl-1,3-benzothiazol-4-ol, CALCIUM ION, ...
著者Cho, H.J, Cierpicki, T.
登録日2019-08-18
公開日2020-09-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Covalent inhibition of NSD1 histone methyltransferase.
Nat.Chem.Biol., 16, 2020
6KQP
DownloadVisualize
BU of 6kqp by Molmil
NSD1 SET domain in complex with SAM
分子名称: Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific, S-ADENOSYLMETHIONINE, ...
著者Cho, H.J, Cierpicki, T.
登録日2019-08-18
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Covalent inhibition of NSD1 histone methyltransferase.
Nat.Chem.Biol., 16, 2020
6WI7
DownloadVisualize
BU of 6wi7 by Molmil
RING1B-BMI1 fusion in closed conformation
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase RING2, Polycomb complex protein BMI-1 chimera, ...
著者Cho, H.J, Cierpicki, T.
登録日2020-04-08
公開日2021-04-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Small-molecule inhibitors targeting Polycomb repressive complex 1 RING domain.
Nat.Chem.Biol., 17, 2021
6WI8
DownloadVisualize
BU of 6wi8 by Molmil
Inhibitor compound-induced confrontational change in Ring1b-Bmi1 domain structure
分子名称: E3 ubiquitin-protein ligase RING2,Polycomb complex protein BMI-1 chimera, ZINC ION
著者Cho, H.J, Cierpicki, T.
登録日2020-04-09
公開日2021-04-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.092 Å)
主引用文献Small-molecule inhibitors targeting Polycomb repressive complex 1 RING domain.
Nat.Chem.Biol., 17, 2021
5VNA
DownloadVisualize
BU of 5vna by Molmil
Crystal structure of human YEATS domain
分子名称: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SULFATE ION, ...
著者Cho, H.J, Cierpicki, T.
登録日2017-04-29
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献GAS41 Recognizes Diacetylated Histone H3 through a Bivalent Binding Mode.
ACS Chem. Biol., 13, 2018
5VNB
DownloadVisualize
BU of 5vnb by Molmil
YEATS in complex with histone H3
分子名称: 1,2-ETHANEDIOL, H3K23acK27ac peptide, SULFATE ION, ...
著者Cho, H.J, Cierpicki, T.
登録日2017-04-29
公開日2018-09-05
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献GAS41 Recognizes Diacetylated Histone H3 through a Bivalent Binding Mode.
ACS Chem. Biol., 13, 2018
5YZH
DownloadVisualize
BU of 5yzh by Molmil
Crystal Structure of Mouse Cytosolic Isocitrate Dehydrogenase
分子名称: GLYCEROL, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Cho, H.J, Kang, B.S.
登録日2017-12-14
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.994 Å)
主引用文献NADP+-dependent cytosolic isocitrate dehydrogenase provides NADPH in the presence of cadmium due to the moderate chelating effect of glutathione.
J. Biol. Inorg. Chem., 23, 2018
5YZI
DownloadVisualize
BU of 5yzi by Molmil
Crystal Structure of Mouse Cytosolic Isocitrate Dehydrogenase complexed with Cadmium
分子名称: CADMIUM ION, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Cho, H.J, Kang, B.S.
登録日2017-12-14
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.519 Å)
主引用文献NADP+-dependent cytosolic isocitrate dehydrogenase provides NADPH in the presence of cadmium due to the moderate chelating effect of glutathione.
J. Biol. Inorg. Chem., 23, 2018
7XKI
DownloadVisualize
BU of 7xki by Molmil
Human Cx36/GJD2 (N-terminal deletion BRIL-fused mutant) gap junction channel in soybean lipids (D6 symmetry)
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein,Soluble cytochrome b562
著者Cho, H.J, Lee, S.N, Jeong, H, Ryu, B, Lee, H.J, Woo, J.S, Lee, H.H.
登録日2022-04-19
公開日2023-03-22
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of human Cx36/GJD2 neuronal gap junction channel.
Nat Commun, 14, 2023
7XKT
DownloadVisualize
BU of 7xkt by Molmil
Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHOLESTEROL HEMISUCCINATE, ...
著者Cho, H.J, Lee, S.N, Jeong, H, Ryu, B, Lee, H.J, Woo, J.S, Lee, H.H.
登録日2022-04-20
公開日2023-03-22
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Cryo-EM structures of human Cx36/GJD2 neuronal gap junction channel.
Nat Commun, 14, 2023
2WAW
DownloadVisualize
BU of 2waw by Molmil
crystal structure of Mycobacterium tuberculosis rv0371c homolog from mycobacterium sp. strain JC1
分子名称: CHLORIDE ION, MOBA RELATE PROTEIN, TRIETHYLENE GLYCOL
著者Cho, H.J, Kang, B.S.
登録日2009-02-17
公開日2010-04-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Mycobacterium Tuberculosis Rv0371C Homolog from Mycobacterium Sp. Strain Jc1
To be Published
2WEE
DownloadVisualize
BU of 2wee by Molmil
Crystal structure of Rv0371c from Mycobacterium tuberculosis H37Rv
分子名称: GLYCEROL, MOBA-RELATED PROTEIN
著者Cho, H.J, Kang, B.S.
登録日2009-03-29
公開日2010-04-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of Rv0371C from Mycobacterium Tuberculosis H37Rv
To be Published
2WE9
DownloadVisualize
BU of 2we9 by Molmil
Crystal structure of Rv0371c from Mycobacterium tuberculosis H37Rv
分子名称: GLYCEROL, MOBA-RELATED PROTEIN
著者Cho, H.J, Kang, B.S.
登録日2009-03-29
公開日2010-04-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Rv0371C from Mycobacterium Tuberculosis H37Rv
To be Published
8XH8
DownloadVisualize
BU of 8xh8 by Molmil
Human Cx36/GJD2 (Ala14-deleted mutant) gap junction channel in porcine brain lipids
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein
著者Cho, H.J, Lee, H.H.
登録日2023-12-17
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
8XGG
DownloadVisualize
BU of 8xgg by Molmil
Human Cx36/GJD2 gap junction channel in complex with 1-hexanol.
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein, HEXAN-1-OL
著者Cho, H.J, Lee, H.H.
登録日2023-12-15
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
8XGJ
DownloadVisualize
BU of 8xgj by Molmil
Human Cx36/GJD2 gap junction channel in complex with mefloquine.
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein, Mefloquine
著者Cho, H.J, Lee, H.H.
登録日2023-12-15
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
8XGF
DownloadVisualize
BU of 8xgf by Molmil
Human Cx36/GJD2 gap junction channel in complex with arachidonic acid.
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, ARACHIDONIC ACID, Gap junction delta-2 protein
著者Cho, H.J, Lee, H.H.
登録日2023-12-15
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
8XGE
DownloadVisualize
BU of 8xge by Molmil
Human Cx36/GJD2 gap junction channel in porcine brain lipids.
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein
著者Cho, H.J, Lee, H.H.
登録日2023-12-15
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
8XGD
DownloadVisualize
BU of 8xgd by Molmil
Human Cx36/GJD2 gap junction channel with pore-lining N-terminal helices in porcine brain lipids.
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, Gap junction delta-2 protein
著者Cho, H.J, Lee, H.H.
登録日2023-12-15
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
8XH9
DownloadVisualize
BU of 8xh9 by Molmil
Human Cx36/GJD2 (Ala14 deletion mutant) gap junction channel prepared with mefloquine, showing no bound mefloquine
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein
著者Cho, H.J, Lee, H.H.
登録日2023-12-17
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Mefloquine-induced conformational shift in Cx36 N-terminal helix leading to channel closure mediated by lipid bilayer.
Nat Commun, 15, 2024
5AIZ
DownloadVisualize
BU of 5aiz by Molmil
The PIAS-like coactivator Zmiz1 is a direct and selective cofactor of Notch1 in T-cell development and leukemia
分子名称: 1,2-ETHANEDIOL, ACETATE ION, UNKNOWN ATOM OR ION, ...
著者Cho, H.J, Murai, M, Chiang, M, Cierpicki, T.
登録日2015-02-18
公開日2015-10-28
最終更新日2015-12-02
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Pias-Like Coactivator Zmiz1 is a Direct and Selective Cofactor of Notch1 in T-Cell Development and Leukemia
Immunity, 43, 2015
2WL9
DownloadVisualize
BU of 2wl9 by Molmil
Crystal structure of catechol 2,3-dioxygenase
分子名称: 3-METHYLCATECHOL, CATECHOL 2,3-DIOXYGENASE, FE (III) ION, ...
著者Cho, H.J, Kim, K.J, Kang, B.S.
登録日2009-06-23
公開日2010-09-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate-Binding Mechanism of a Type I Extradiol Dioxygenase.
J.Biol.Chem., 285, 2010
2XVJ
DownloadVisualize
BU of 2xvj by Molmil
Crystal structure of the mutant bacterial flavin containing monooxygenase in complex with indole
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, FLAVIN-CONTAINING MONOOXYGENASE, ...
著者Cho, H.J, Kang, B.S.
登録日2010-10-26
公開日2011-05-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural and Functional Analysis of Bacterial Flavin-Containing Monooxygenase Reveals its Ping-Pong-Type Reaction Mechanism.
J.Struct.Biol., 175, 2011
7C0J
DownloadVisualize
BU of 7c0j by Molmil
Crystal structure of chimeric mutant of GH5 in complex with Z-DNA
分子名称: DNA (5'-D(*TP*CP*GP*CP*GP*CP*G)-3'), Histone H5,Double-stranded RNA-specific adenosine deaminase
著者Choi, H.J, Park, C.H.
登録日2020-05-01
公開日2020-12-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Dual conformational recognition by Z-DNA binding protein is important for the B-Z transition process.
Nucleic Acids Res., 48, 2020

 

1234>

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon