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PDB: 772 件
3AQO
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BU of 3aqo by Molmil
Structure and function of a membrane component SecDF that enhances protein export
分子名称: Probable SecDF protein-export membrane protein
著者Echizen, Y, Tsukazaki, T, Ishitani, R, Nureki, O.
登録日2010-11-16
公開日2011-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of a membrane component SecDF that enhances protein export.
Nature, 474, 2011
8UNG
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BU of 8ung by Molmil
Solution structure of toxin, U-RDTX-Pp19, from assassin bug Pristhesancus plagipennis
分子名称: Venom peptide Pp19a
著者Chin, Y.K.Y, Walker, A.A, King, G.F.
登録日2023-10-18
公開日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and bioactivity of an insecticidal trans-defensin from assassin bug venom
Structure, 2024
7E9U
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BU of 7e9u by Molmil
Trehalase of Arabidopsis thaliana
分子名称: GLYCEROL, PHOSPHATE ION, SODIUM ION, ...
著者Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
登録日2021-03-05
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7EAW
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BU of 7eaw by Molmil
Trehalase of Arabidopsis thaliana acid mutant -D380A trehalose complex
分子名称: GLYCEROL, Trehalase, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
登録日2021-03-08
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
2ZJ9
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BU of 2zj9 by Molmil
X-ray crystal structure of AmpC beta-Lactamase (AmpC(D)) from an Escherichia coli with a Tripeptide Deletion (Gly286 Ser287 Asp288) on the H10 Helix
分子名称: AmpC, ISOPROPYL ALCOHOL, SODIUM ION
著者Yamaguchi, Y, Sato, G, Yamagata, Y, Wachino, J, Arakawa, Y, Kurosaki, H.
登録日2008-02-29
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of AmpC beta-lactamase (AmpCD) from an Escherichia coli clinical isolate with a tripeptide deletion (Gly286-Ser287-Asp288) in the H10 helix
Acta Crystallogr.,Sect.F, 65, 2009
1V47
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BU of 1v47 by Molmil
Crystal structure of ATP sulfurylase from Thermus thermophillus HB8 in complex with APS
分子名称: ADENOSINE-5'-PHOSPHOSULFATE, ATP sulfurylase, CHLORIDE ION, ...
著者Taguchi, Y, Sugishima, M, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-11
公開日2004-04-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structure of a novel zinc-binding ATP sulfurylase from Thermus thermophilus HB8
Biochemistry, 43, 2004
2FFN
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BU of 2ffn by Molmil
The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H, Morita, K.
登録日2005-12-20
公開日2006-12-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Roles of charged residues in pH-dependent redox properties of cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
BIOPHYSICS(BSJ), 2, 2006
2EWK
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BU of 2ewk by Molmil
The T24V mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H, Morita, K.
登録日2005-11-03
公開日2006-11-28
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008
2CWV
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BU of 2cwv by Molmil
Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
登録日2005-06-26
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWU
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BU of 2cwu by Molmil
Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
登録日2005-06-26
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWT
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BU of 2cwt by Molmil
Catalytic base deletion in copper amine oxidase from arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
登録日2005-06-26
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
5GV0
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BU of 5gv0 by Molmil
Crystal structure of the membrane-proximal domain of mouse lysosome-associated membrane protein 1 (LAMP-1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosome-associated membrane glycoprotein 1, SULFATE ION
著者Tomabechi, Y, Ehara, H, Kukimoto-Niino, M, Shirouzu, M.
登録日2016-09-01
公開日2016-10-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Lysosome-associated membrane proteins-1 and -2 (LAMP-1 and LAMP-2) assemble via distinct modes
Biochem.Biophys.Res.Commun., 479, 2016
1WIV
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BU of 1wiv by Molmil
solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
分子名称: ubiquitin-specific protease 14
著者Higuchi, Y, Abe, T, Hirota, H, Izumi, K, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
To be Published
7R6P
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BU of 7r6p by Molmil
Solution structure of peptide toxin MIITX2-Mg1a from the venom of the Australian giant red bull ant Myrmecia gulosa
分子名称: U-myrmeciitoxin(02)-Mg1a
著者Chin, Y.K, Eagle, D, Bankala, K, Robinson, S.D.
登録日2021-06-23
公開日2022-02-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A peptide toxin in ant venom mimics vertebrate EGF-like hormones to cause long-lasting hypersensitivity in mammals.
Proc.Natl.Acad.Sci.USA, 119, 2022
1WMX
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BU of 1wmx by Molmil
Crystal Structure of Family 30 Carbohydrate Binding Module
分子名称: COG3291: FOG: PKD repeat, SULFATE ION
著者Horiguchi, Y, Kono, M, Suzuki, A, Yamane, T, Arai, M, Sakka, K, Omiya, K.
登録日2004-07-21
公開日2004-08-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Family 30 Carbohydrate Binding Module
To be Published
1WZX
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BU of 1wzx by Molmil
Crystal Structure of Family 30 Carbohydrate Binding Module.
分子名称: COG3291: FOG: PKD repeat
著者Horiguchi, Y, Kono, M, Suzuki, A, Yamane, T, Arai, M, Sakka, K, Omiya, K.
登録日2005-03-10
公開日2005-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.52 Å)
主引用文献Crystal Structure of Family 30 Carbohydrate Binding Module
To be Published
1RDV
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BU of 1rdv by Molmil
RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, TRIGONAL CRYSTAL FORM
分子名称: FE (III) ION, RUBREDOXIN
著者Higuchi, Y, Yasuoka, N.
登録日1998-09-30
公開日1999-05-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
Acta Crystallogr.,Sect.D, 55, 1999
1VEJ
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BU of 1vej by Molmil
Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
分子名称: RIKEN cDNA 4931431F19
著者Higuchi, Y, Abe, T, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-31
公開日2005-05-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
To be Published
1VEK
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BU of 1vek by Molmil
Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
分子名称: ubiquitin-specific protease 14, putative
著者Higuchi, Y, Abe, T, Hirota, H, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-31
公開日2004-09-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
To be Published
3AMY
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BU of 3amy by Molmil
Crystal structure of human CK2 alpha complexed with apigenin
分子名称: 1,2-ETHANEDIOL, 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, Casein kinase II subunit alpha
著者Sekiguchi, Y, Nakaniwa, T, Kinoshita, T, Tada, T.
登録日2010-08-25
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human CK2 alpha complexed with apigenin
To be Published
2RDV
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BU of 2rdv by Molmil
RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, MONOCLINIC CRYSTAL FORM
分子名称: FE (III) ION, RUBREDOXIN
著者Higuchi, Y, Yasuoka, N.
登録日1998-10-07
公開日1999-05-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
Acta Crystallogr.,Sect.D, 55, 1999
3VSM
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BU of 3vsm by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
2FMY
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BU of 2fmy by Molmil
CO-dependent transcription factor CooA from Carboxydothermus hydrogenoformans (Imidazole-bound form)
分子名称: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, carbon monoxide oxidation system transcription regulator CooA-1
著者Higuchi, Y, Komori, H.
登録日2006-01-10
公開日2007-01-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of CO-sensing Transcription Activator CooA Bound to Exogenous Ligand Imidazole
J.Mol.Biol., 367, 2007
3VSN
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BU of 3vsn by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, IODIDE ION, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
2EWI
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BU of 2ewi by Molmil
The F20Y mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H, Morita, K.
登録日2005-11-03
公開日2006-11-28
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The F20Y mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris
To be Published

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