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PDB: 86 results

5JAF
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LeuT Na+-free Return State, C2 form at pH 5
Descriptor: Transporter, octyl beta-D-glucopyranoside
Authors:Malinauskaite, L, Sahin, C, Said, S, Grouleff, J, Shahsavar, A, Bjerregaard, H, Noer, P, Severinsen, K, Boesen, T, Schiott, B, Sinning, S, Nissen, P.
Deposit date:2016-04-12
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.021 Å)
Cite:A conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state.
Nat Commun, 7, 2016
5JAG
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LeuT T354H mutant in the outward-oriented, Na+-free Return State
Descriptor: Transporter, octyl beta-D-glucopyranoside
Authors:Malinauskaite, L, Sahin, C, Said, S, Grouleff, J, Shahsavar, A, Bjerregaard, H, Noer, P, Severinsen, K, Boesen, T, Schiott, B, Sinning, S, Nissen, P.
Deposit date:2016-04-12
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:A conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state.
Nat Commun, 7, 2016
4PXI
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Elucidation of the Structural and Functional Mechanism of Action of the TetR Family Protein, CprB from S. coelicolor A3(2)
Descriptor: CprB, DNA (5'-D(*AP*CP*AP*TP*AP*CP*GP*GP*GP*AP*CP*GP*CP*CP*CP*CP*GP*TP*TP*TP*AP*T)-3'), DNA (5'-D(*AP*TP*AP*AP*AP*CP*GP*GP*GP*GP*CP*GP*TP*CP*CP*CP*GP*TP*AP*TP*GP*T)-3')
Authors:Hussain, B, Ruchika, B, Aruna, B, Ruchi, A.
Deposit date:2014-03-24
Release date:2014-07-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and functional basis of transcriptional regulation by TetR family protein CprB from S. coelicolor A3(2)
Nucleic Acids Res., 42, 2014
4M8D
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Crystal structure of an isatin hydrolase bound to product analogue thioisatinate
Descriptor: CALCIUM ION, MANGANESE (II) ION, Putative uncharacterized protein, ...
Authors:Bjerregaard-Andersen, K, Sommer, T, Jensen, J.K, Jochimsen, B, Etzerodt, M, Morth, J.P.
Deposit date:2013-08-13
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A proton wire and water channel revealed in the crystal structure of isatin hydrolase.
J.Biol.Chem., 289, 2014
4J2T
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Inhibitor-bound Ca2+ ATPase
Descriptor: (3S,3aR,4S,6S,6aR,7S,8S,9bS)-6-(acetyloxy)-3a,4-bis(butanoyloxy)-3-hydroxy-3,6,9-trimethyl-8-{[(2E)-2-methylbut-2-enoyl]oxy}-2-oxo-2,3,3a,4,5,6,6a,7,8,9b-decahydroazuleno[4,5-b]furan-7-yl octanoate, PHOSPHATIDYLETHANOLAMINE, POTASSIUM ION, ...
Authors:Paulsen, E.S, Villadsen, J, Tenori, E, Liu, H, Lie, M.A, Bonde, D.F, Bublitz, M, Olesen, C, Autzen, H.E, Dach, I, Sehgal, P, Moller, J.V, Schiott, B, Nissen, P, Christensen, S.B.
Deposit date:2013-02-05
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Water-mediated interactions influence the binding of thapsigargin to sarco/endoplasmic reticulum calcium adenosinetriphosphatase.
J.Med.Chem., 56, 2013
4J0N
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Crystal structure of a manganese dependent isatin hydrolase
Descriptor: CALCIUM ION, Isatin hydrolase B, MANGANESE (II) ION, ...
Authors:Bjerregaard-Andersen, K, Sommer, T, Jensen, J.K, Jochimsen, B, Etzerodt, M, Morth, J.P.
Deposit date:2013-01-31
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A proton wire and water channel revealed in the crystal structure of isatin hydrolase.
J.Biol.Chem., 289, 2014
6GHW
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Substituting the prolines of 4-oxalocrotonate tautomerase with non-canonical analogue (2S)-3,4-dehydroproline
Descriptor: 2-hydroxymuconate tautomerase, CALCIUM ION
Authors:Pavkov-Keller, T, Lukesch, M.S, Wiltschi, B, Gruber, K.
Deposit date:2018-05-09
Release date:2019-03-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substituting the catalytic proline of 4-oxalocrotonate tautomerase with non-canonical analogues reveals a finely tuned catalytic system.
Sci Rep, 9, 2019
5T4W
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Crystal structure of a DNA sequence d (CGTGAATTCACG) with DAPI
Descriptor: 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE, DNA (5'-D(*CP*GP*TP*GP*AP*AP*TP*TP*CP*AP*CP*G)-3')
Authors:Sbirkova, H, Schivachev, B.
Deposit date:2016-08-30
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the DNA sequence d(CGTGAATTCACG)2 with DAPI.
Acta Crystallogr F Struct Biol Commun, 73, 2017
1MNY
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Dimethyl propionate ester heme-containing cytochrome b5
Descriptor: DIMETHYL PROPIONATE ESTER HEME, cytochrome b5
Authors:Banci, L, Bertini, I, Branchini, B.R, Hajieva, P, Spyroulias, G.A, Turano, P.
Deposit date:2002-09-06
Release date:2002-11-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Dimethyl propionate ester heme-containing cytochrome b5: structure and stability.
J.BIOL.INORG.CHEM., 6, 2001
1H8S
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Three-dimensional structure of anti-ampicillin single chain Fv fragment complexed with the hapten.
Descriptor: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, MUTANT AL2 6E7P9G, SULFATE ION
Authors:Burmester, J, Spinelli, S, Pugliese, L, Krebber, A, Honegger, A, Jung, S, Schimmele, B, Cambillau, C, Pluckthun, A.
Deposit date:2001-02-15
Release date:2001-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Selection, Characterization and X-Ray Structure of Anti-Ampicillin Single-Chain Fv Fragments from Phage-Displayed Murine Antibody Libraries
J.Mol.Biol., 309, 2001
1H8O
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Three-dimensional structure of anti-ampicillin single chain Fv fragment.
Descriptor: MUTANT AL2 6E7P9G, SULFATE ION
Authors:Burmester, J, Spinelli, S, Pugliese, L, Krebber, A, Honegger, A, Jung, S, Schimmele, B, Cambillau, C, Pluckthun, A.
Deposit date:2001-02-14
Release date:2001-08-02
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Selection, Characterization and X-Ray Structure of Anti-Ampicillin Single-Chain Fv Fragments from Phage-Displayed Murine Antibody Libraries
J.Mol.Biol., 309, 2001
2VKZ
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BU of 2vkz by Molmil
Structure of the cerulenin-inhibited fungal fatty acid synthase type I multienzyme complex
Descriptor: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE, FATTY ACID SYNTHASE SUBUNIT ALPHA, ...
Authors:Johansson, P, Wiltschi, B, Kumari, P, Kessler, B, Vonrhein, C, Vonck, J, Oesterhelt, D, Grininger, M.
Deposit date:2008-01-07
Release date:2008-08-12
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (4 Å)
Cite:Inhibition of the Fungal Fatty Acid Synthase Type I Multienzyme Complex.
Proc.Natl.Acad.Sci.USA, 105, 2008
2V5U
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I92A FLAVODOXIN FROM ANABAENA
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Martinez-Julvez, M, Herguedas, B, Frago, S, Serrano, A, Molina, R, Hamiaux, C, Schierbeek, B, Medina, M, Hermoso, J.A.
Deposit date:2007-07-10
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Tuning of the Fmn Binding and Oxido-Reduction Properties by Neighboring Side Chains in Anabaena Flavodoxin.
Arch.Biochem.Biophys., 467, 2007
1YK3
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BU of 1yk3 by Molmil
Crystal structure of Rv1347c from Mycobacterium tuberculosis
Descriptor: Hypothetical protein Rv1347c/MT1389, octyl beta-D-glucopyranoside
Authors:Card, G.L, Peterson, N.A, Smith, C.A, Rupp, B, Schick, B.M, Baker, E.N, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-01-16
Release date:2005-02-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of Rv1347c, a putative antibiotic resistance protein from Mycobacterium tuberculosis, reveals a GCN5-related fold and suggests an alternative function in siderophore biosynthesis
J.Biol.Chem., 280, 2005
4G37
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BU of 4g37 by Molmil
Structure of cross-linked firefly luciferase in second catalytic conformation
Descriptor: 4,4'-(ethylenediimino)bis[4-oxobutyrate], 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE, CHLORIDE ION, ...
Authors:Sundlov, J.A, Branchini, B.R, Gulick, A.M.
Deposit date:2012-07-13
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Crystal structure of firefly luciferase in a second catalytic conformation supports a domain alternation mechanism.
Biochemistry, 51, 2012
1H8N
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Three-dimensional structure of anti-ampicillin single chain Fv fragment from phage-displayed murine antibody libraries
Descriptor: GLYCEROL, MUTANT AL2 6E7S9G, SULFATE ION
Authors:Jung, S, Spinelli, S, Schimmele, B, Honegger, A, Pugliese, L, Cambillau, C, Pluckthun, A.
Deposit date:2001-02-14
Release date:2001-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The Importance of Framework Residues H6, H7 and H10 in Antibody Heavy Chains: Experimental Evidence for a New Structural Subclassification of Antibody V(H) Domains
J.Mol.Biol., 309, 2001
1I3G
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BU of 1i3g by Molmil
CRYSTAL STRUCTURE OF AN AMPICILLIN SINGLE CHAIN FV, FORM 1, FREE
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ANTIBODY FV FRAGMENT
Authors:Jung, S, Spinelli, S, Schimmele, B, Honegger, A, Pugliese, L, Cambillau, C, Pluckthun, A.
Deposit date:2001-02-15
Release date:2001-10-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Selection, characterization and x-ray structure of anti-ampicillin single-chain Fv fragments from phage-displayed murine antibody libraries.
J.Mol.Biol., 309, 2001
2IO8
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BU of 2io8 by Molmil
E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Bifunctional glutathionylspermidine synthetase/amidase, CYSTEINE, ...
Authors:Pai, C.H, Chiang, B.Y, Ko, T.P, Chou, C.C, Chong, C.M, Yen, F.J, Coward, J.K, Wang, A.H.-J, Lin, C.H.
Deposit date:2006-10-10
Release date:2006-12-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase
Embo J., 25, 2006
2IOA
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BU of 2ioa by Molmil
E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ and ADP and phosphinate inhibitor
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Bifunctional glutathionylspermidine synthetase/amidase, D-GAMMA-GLUTAMYL-N-{[(R)-{4-[(4-AMINOBUTYL)AMINO]BUTYL}(PHOSPHONOOXY)PHOSPHORYL]METHYL}-D-ALANINAMIDE, ...
Authors:Pai, C.H, Chiang, B.Y, Ko, T.P, Chou, C.C, Chong, C.M, Yen, F.J, Coward, J.K, Wang, A.H.-J, Lin, C.H.
Deposit date:2006-10-10
Release date:2006-12-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase
Embo J., 25, 2006
2IO9
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E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ ,GSH and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Bifunctional glutathionylspermidine synthetase/amidase, GLUTATHIONE, ...
Authors:Pai, C.H, Chiang, B.Y, Ko, T.P, Chou, C.C, Chong, C.M, Yen, F.J, Coward, J.K, Wang, A.H.-J, Lin, C.H.
Deposit date:2006-10-10
Release date:2006-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase
Embo J., 25, 2006
2IO7
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BU of 2io7 by Molmil
E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ and AMPPNP
Descriptor: Bifunctional glutathionylspermidine synthetase/amidase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Pai, C.H, Chiang, B.Y, Ko, T.P, Chong, C.M, Yen, F.J, Coward, J.K, Wang, A.H.-J, Lin, C.H.
Deposit date:2006-10-10
Release date:2006-12-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase
Embo J., 25, 2006
2QOS
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BU of 2qos by Molmil
Crystal structure of complement protein C8 in complex with a peptide containing the C8 binding site on C8
Descriptor: Complement component 8, gamma polypeptide, Complement component C8 alpha chain
Authors:Lovelace, L.L, Chiswell, B, Slade, D.J, Sodetz, J.M, Lebioda, L.
Deposit date:2007-07-20
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of complement protein C8gamma in complex with a peptide containing the C8gamma binding site on C8alpha: Implications for C8gamma ligand binding.
Mol.Immunol., 45, 2008
6SO7
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BamABCDE in MSP1D1 nanodisc ensemble 1-2
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Iadanza, M.G, Ranson, N.A, Radford, S.E, Higgins, A.J, Calabrese, A.N, Schiffrin, B, White, P.
Deposit date:2019-08-29
Release date:2021-03-31
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:BamABCDE in MSP1D1 nanodisc ensemble 1-2
To Be Published
6SOG
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BamABCDE in MSP1D1 nanodisc ensemble 1-6
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Iadanza, M.G, Ranson, N.A, Radford, S.E, Higgins, A.J, Calabrese, A.N, Schiffrin, B, White, P.
Deposit date:2019-08-29
Release date:2021-03-31
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:BamABCDE in MSP1D1 nanodisc ensemble 1-6
To Be Published
6SN0
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BamABCDE in MSP1D1 nanodisc ensemble 0-1
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Iadanza, M.G, Ranson, N.A, Radford, S.E, Higgins, A.J, Calabrese, A.N, Schiffrin, B, White, P.
Deposit date:2019-08-23
Release date:2021-03-31
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:BamABCDE in MSP1D1 nanodisc ensemble 0-1
To Be Published

224201

數據於2024-08-28公開中

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