Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 760 results

6ORB
DownloadVisualize
BU of 6orb by Molmil
Full-length S. pombe Mdn1 in the presence of ATP and Rbin-1
Descriptor: Midasin
Authors:Chen, Z, Suzuki, H, Wang, A.C, DiMaio, F, Walz, T, Kapoor, T.M.
Deposit date:2019-04-29
Release date:2019-05-29
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural Insights into Mdn1, an Essential AAA Protein Required for Ribosome Biogenesis.
Cell, 175, 2018
6OR5
DownloadVisualize
BU of 6or5 by Molmil
Full-length S. pombe Mdn1 in the presence of AMPPNP (ring region)
Descriptor: Midasin, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Chen, Z, Suzuki, H, Wang, A.C, DiMaio, F, Walz, T, Kapoor, T.M.
Deposit date:2019-04-29
Release date:2019-05-29
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Insights into Mdn1, an Essential AAA Protein Required for Ribosome Biogenesis.
Cell, 175, 2018
4N78
DownloadVisualize
BU of 4n78 by Molmil
The WAVE Regulatory Complex Links Diverse Receptors to the Actin Cytoskeleton
Descriptor: Abl interactor 2, CHLORIDE ION, Cytoplasmic FMR1-interacting protein 1, ...
Authors:Chen, Z.C.
Deposit date:2013-10-15
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:The WAVE Regulatory Complex Links Diverse Receptors to the Actin Cytoskeleton.
Cell(Cambridge,Mass.), 156, 2014
7VWC
DownloadVisualize
BU of 7vwc by Molmil
Cryo-EM structure of human very long-chain fatty acid ABC transporter ABCD1
Descriptor: Peroxisomal Membrane Protein related,ATP-binding cassette sub-family D member 1, [(2R)-3-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-2-oxidanyl-propyl] octadecanoate
Authors:Chen, Z.P, Xu, D, Wang, L, Mao, Y.X, Yang, L, Cheng, M.T, Hou, W.T, Chen, Y.X, Zhou, C.Z.
Deposit date:2021-11-10
Release date:2022-05-18
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural basis of substrate recognition and translocation by human very long-chain fatty acid transporter ABCD1.
Nat Commun, 13, 2022
7VZB
DownloadVisualize
BU of 7vzb by Molmil
Cryo-EM structure of C22:0-CoA bound human very long-chain fatty acid ABC transporter ABCD1
Descriptor: CHOLESTEROL HEMISUCCINATE, Peroxisomal Membrane Protein related,ATP-binding cassette sub-family D member 1, S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] docosanethioate
Authors:Chen, Z.P, Xu, D, Wang, L, Mao, Y.X, Yang, L, Cheng, M.T, Hou, W.T, Chen, Y.X, Zhou, C.Z.
Deposit date:2021-11-15
Release date:2022-05-18
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Structural basis of substrate recognition and translocation by human very long-chain fatty acid transporter ABCD1.
Nat Commun, 13, 2022
7VX8
DownloadVisualize
BU of 7vx8 by Molmil
Cryo-EM structure of ATP-bound human very long-chain fatty acid ABC transporter ABCD1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Peroxisomal Membrane Protein related,ATP-binding cassette sub-family D member 1
Authors:Chen, Z.P, Xu, D, Wang, L, Mao, Y.X, Yang, L, Cheng, M.T, Hou, W.T, Chen, Y.X, Zhou, C.Z.
Deposit date:2021-11-12
Release date:2022-05-18
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of substrate recognition and translocation by human very long-chain fatty acid transporter ABCD1.
Nat Commun, 13, 2022
1HSH
DownloadVisualize
BU of 1hsh by Molmil
CRYSTAL STRUCTURE AT 1.9 ANGSTROMS RESOLUTION OF HUMAN IMMUNODEFICIENCY VIRUS (HIV) II PROTEASE COMPLEXED WITH L-735,524, AN ORALLY BIOAVAILABLE INHIBITOR OF THE HIV PROTEASES
Descriptor: HIV-II PROTEASE, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE
Authors:Chen, Z.
Deposit date:1995-03-31
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure at 1.9-A resolution of human immunodeficiency virus (HIV) II protease complexed with L-735,524, an orally bioavailable inhibitor of the HIV proteases.
J.Biol.Chem., 269, 1994
6V08
DownloadVisualize
BU of 6v08 by Molmil
Crystal structure of human recombinant Beta-2 glycoprotein I (hrB2GPI)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-glycoprotein 1, SULFATE ION, ...
Authors:Chen, Z, Ruben, E.A, Planer, W, Chinnaraj, M, Zuo, X, Pengo, V, Macor, P, Tedesco, F, Pozzi, N.
Deposit date:2019-11-18
Release date:2020-06-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:The J-elongated conformation of beta2-glycoprotein I predominates in solution: implications for our understanding of antiphospholipid syndrome.
J.Biol.Chem., 295, 2020
9JAO
DownloadVisualize
BU of 9jao by Molmil
The structure of SMARCAD1 bound to the hexasome in the presence of ADP-BeFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (157-MER), ...
Authors:Chen, Z.C, Hu, P.J, Sia, Y.Y, Chen, K.J, Xia, X.
Deposit date:2024-08-25
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Nucleosome intermediate preference of SMARCAD1 chromatin remodeler, and the structural insights
To Be Published
4XOH
DownloadVisualize
BU of 4xoh by Molmil
Mechanistic insights into anchorage of the contractile ring from yeast to humans
Descriptor: Division mal foutue 1 protein
Authors:Chen, Z, Wu, J.-Q, Wang, J, Guan, R, Sun, L, Lee, I.-J, Liu, Y, Chen, M.
Deposit date:2015-01-16
Release date:2015-07-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
5J9Q
DownloadVisualize
BU of 5j9q by Molmil
Crystal structure of the NuA4 core complex
Descriptor: Chromatin modification-related protein EAF6, Chromatin modification-related protein YNG2, Enhancer of polycomb-like protein 1, ...
Authors:Chen, Z.C, Xu, P.
Deposit date:2016-04-11
Release date:2016-10-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The NuA4 Core Complex Acetylates Nucleosomal Histone H4 through a Double Recognition Mechanism
Mol.Cell, 63, 2016
7VOE
DownloadVisualize
BU of 7voe by Molmil
Crystal structure of 5-HT2AR in complex with aripiprazole
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 5-hydroxytryptamine receptor 2A,Soluble cytochrome b562, 7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one, ...
Authors:Chen, Z, Fan, L, Wang, H, Yu, J, Lu, D, Qi, J, Nie, F, Luo, Z, Liu, Z, Cheng, J, Wang, S.
Deposit date:2021-10-13
Release date:2021-12-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based design of a novel third-generation antipsychotic drug lead with potential antidepressant properties.
Nat.Neurosci., 25, 2022
7VOD
DownloadVisualize
BU of 7vod by Molmil
Crystal structure of 5-HT2AR in complex with cariprazine
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-[4-[2-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]ethyl]cyclohexyl]-1,1-dimethyl-urea, 5-hydroxytryptamine receptor 2A,Soluble cytochrome b562, ...
Authors:Chen, Z, Fan, L, Wang, H, Yu, J, Lu, D, Qi, J, Nie, F, Luo, Z, Liu, Z, Cheng, J, Wang, S.
Deposit date:2021-10-13
Release date:2021-12-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure-based design of a novel third-generation antipsychotic drug lead with potential antidepressant properties.
Nat.Neurosci., 25, 2022
1KV9
DownloadVisualize
BU of 1kv9 by Molmil
Structure at 1.9 A Resolution of a Quinohemoprotein Alcohol Dehydrogenase from Pseudomonas putida HK5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETONE, CALCIUM ION, ...
Authors:Chen, Z.-W, Matsushita, K, Yamashita, T, Fujii, T, Toyama, H, Adachi, O, Bellamy, H.D, Mathews, F.S.
Deposit date:2002-01-25
Release date:2002-07-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure at 1.9 A resolution of a quinohemoprotein alcohol dehydrogenase from Pseudomonas putida HK5.
Structure, 10, 2002
5NKP
DownloadVisualize
BU of 5nkp by Molmil
Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide
Descriptor: CHLORIDE ION, CITRIC ACID, Kelch-like protein 3, ...
Authors:Chen, Z, Sorrell, F.J, Pinkas, D.M, Williams, E, Mathea, S, Goubin, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Burgess-Brown, N, Bountra, C, Bullock, A.
Deposit date:2017-03-31
Release date:2017-05-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide
To Be Published
1HSI
DownloadVisualize
BU of 1hsi by Molmil
CRYSTAL STRUCTURE AT 1.9 ANGSTROMS RESOLUTION OF HUMAN IMMUNODEFICIENCY VIRUS (HIV) II PROTEASE COMPLEXED WITH L-735,524, AN ORALLY BIOAVAILABLE INHIBITOR OF THE HIV PROTEASES
Descriptor: HIV-2 PROTEASE
Authors:Chen, Z.
Deposit date:1995-03-31
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure at 1.9-A resolution of human immunodeficiency virus (HIV) II protease complexed with L-735,524, an orally bioavailable inhibitor of the HIV proteases.
J.Biol.Chem., 269, 1994
1HSG
DownloadVisualize
BU of 1hsg by Molmil
CRYSTAL STRUCTURE AT 1.9 ANGSTROMS RESOLUTION OF HUMAN IMMUNODEFICIENCY VIRUS (HIV) II PROTEASE COMPLEXED WITH L-735,524, AN ORALLY BIOAVAILABLE INHIBITOR OF THE HIV PROTEASES
Descriptor: HIV-1 PROTEASE, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE
Authors:Chen, Z.
Deposit date:1995-03-31
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure at 1.9-A resolution of human immunodeficiency virus (HIV) II protease complexed with L-735,524, an orally bioavailable inhibitor of the HIV proteases.
J.Biol.Chem., 269, 1994
8SYN
DownloadVisualize
BU of 8syn by Molmil
Human VPS35L/VPS29/VPS26C Complex
Descriptor: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 26C, Vacuolar protein sorting-associated protein 29
Authors:Chen, Z, Chen, B, Burstein, E, Han, Y.
Deposit date:2023-05-25
Release date:2023-11-01
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural organization of the retriever-CCC endosomal recycling complex.
Nat.Struct.Mol.Biol., 31, 2024
8SYM
DownloadVisualize
BU of 8sym by Molmil
Human VPS29/VPS35L Complex (Locally refined map)
Descriptor: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 29
Authors:Chen, Z, Chen, B, Burstein, E, Han, Y.
Deposit date:2023-05-25
Release date:2023-11-01
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural organization of the retriever-CCC endosomal recycling complex.
Nat.Struct.Mol.Biol., 31, 2024
8SYO
DownloadVisualize
BU of 8syo by Molmil
Human Retriever VPS35L/VPS29/VPS26C Complex (Composite Map)
Descriptor: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 26C, Vacuolar protein sorting-associated protein 29
Authors:Chen, Z, Chen, B, Burstein, E, Han, Y.
Deposit date:2023-05-25
Release date:2023-11-01
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural organization of the retriever-CCC endosomal recycling complex.
Nat.Struct.Mol.Biol., 31, 2024
8D6Q
DownloadVisualize
BU of 8d6q by Molmil
Rana catesbeiana saxiphilin mutant - Y558I
Descriptor: Saxiphilin
Authors:Chen, Z, Zakrzewska, S, Minor, D.L.
Deposit date:2022-06-06
Release date:2022-11-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family.
Proc.Natl.Acad.Sci.USA, 119, 2022
8D6S
DownloadVisualize
BU of 8d6s by Molmil
Rana catesbeiana saxiphilin mutant - Y558A:STX (co-crystal)
Descriptor: Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate
Authors:Chen, Z, Zakrzewska, S, Minor, D.L.
Deposit date:2022-06-06
Release date:2022-11-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family.
Proc.Natl.Acad.Sci.USA, 119, 2022
8D6U
DownloadVisualize
BU of 8d6u by Molmil
Rana catesbeiana saxiphilin:F-STX (soaked)
Descriptor: (2P)-4-({6-[({[(3aS,4R,7R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methoxy}carbonyl)amino]hexyl}carbamoyl)-2-{[4aP,9(9a)P]-6-hydroxy-3-oxo-3H-xanthen-9-yl}benzoic acid, Saxiphilin
Authors:Chen, Z, Zakrzewska, S, Minor, D.L.
Deposit date:2022-06-06
Release date:2022-11-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family.
Proc.Natl.Acad.Sci.USA, 119, 2022
8D6T
DownloadVisualize
BU of 8d6t by Molmil
Rana catesbeiana saxiphilin mutant - Y558I:STX (co-crystal)
Descriptor: CACODYLATE ION, Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate
Authors:Chen, Z, Zakrzewska, S, Minor, D.L.
Deposit date:2022-06-06
Release date:2022-11-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family.
Proc.Natl.Acad.Sci.USA, 119, 2022
8D6P
DownloadVisualize
BU of 8d6p by Molmil
Rana catesbeiana saxiphilin mutant - Y558A
Descriptor: Saxiphilin
Authors:Chen, Z, Zakrzewska, S, Minor, D.L.
Deposit date:2022-06-06
Release date:2022-11-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family.
Proc.Natl.Acad.Sci.USA, 119, 2022

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon