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PDB: 480 results

4M6B
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BU of 4m6b by Molmil
Crystal structure of yeast Swr1-Z domain in complex with H2A.Z-H2B dimer
Descriptor: Chimera protein of Histone H2B.1 and Histone H2A.Z, Helicase SWR1
Authors:Hong, J.J, Feng, H.Q, Wang, F, Ranjan, A, Chen, J.H, Jiang, J.S, Girlando, R, Xiao, T.S, Wu, C, Bai, Y.W.
Deposit date:2013-08-09
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer.
Mol.Cell, 53, 2014
3OOR
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BU of 3oor by Molmil
I-SceI mutant (K86R/G100T)complexed with C/G+4 DNA substrate
Descriptor: 5'-D(*CP*AP*CP*GP*CP*TP*AP*GP*GP*GP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*AP*AP*TP*AP*C)-3', 5'-D(*GP*GP*TP*AP*TP*TP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*CP*CP*CP*TP*AP*GP*CP*GP*T)-3', CALCIUM ION, ...
Authors:Joshi, R, Chen, J.-H, Golden, B.L, Gimble, F.S.
Deposit date:2010-08-31
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evolution of I-SceI Homing Endonucleases with Increased DNA Recognition Site Specificity.
J.Mol.Biol., 405, 2011
3OOL
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BU of 3ool by Molmil
I-SceI complexed with C/G+4 DNA substrate
Descriptor: 5'-D(*CP*AP*CP*GP*CP*TP*AP*GP*GP*GP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*AP*AP*TP*AP*C)-3', 5'-D(*GP*GP*TP*AP*TP*TP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*CP*CP*CP*TP*AP*GP*CP*GP*T)-3', CALCIUM ION, ...
Authors:Joshi, R, Chen, J.-H, Golden, B.L, Gimble, F.S.
Deposit date:2010-08-31
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of I-SceI Homing Endonucleases with Increased DNA Recognition Site Specificity.
J.Mol.Biol., 405, 2011
3P30
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BU of 3p30 by Molmil
crystal structure of the cluster II Fab 1281 in complex with HIV-1 gp41 ectodomain
Descriptor: 1281 Fab heavy chain, 1281 Fab light chain, HIV-1 gp41
Authors:Frey, G, Chen, J, Rits-Volloch, S, Freeman, M.M, Zolla-Pazner, S, Chen, B.
Deposit date:2010-10-04
Release date:2010-11-17
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Distinct conformational states of HIV-1 gp41 are recognized by neutralizing and non-neutralizing antibodies.
Nat.Struct.Mol.Biol., 17, 2010
5YY6
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BU of 5yy6 by Molmil
Crystal structure of Arabidopsis thaliana HPPD truncated mutant complexed with Benquitrione
Descriptor: 3-(2,6-dimethylphenyl)-1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, W.C, Chen, J.N, Yang, G.F.
Deposit date:2017-12-08
Release date:2019-01-16
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal Structure of 4-Hydroxyphenylpyruvate Dioxygenase in Complex with Substrate Reveals a New Starting Point for Herbicide Discovery.
Research (Wash D C), 2019, 2019
3WL5
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BU of 3wl5 by Molmil
Crystal structure of pOPH S172C
Descriptor: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chan, H.C, Ren, F.F, Jia, D.X, Wang, A.H.-J, Guo, R.T, Chen, J, Du, G.C.
Deposit date:2013-11-07
Release date:2014-09-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into enzymatic degradation of oxidized polyvinyl alcohol
Chembiochem, 15, 2014
3WL8
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BU of 3wl8 by Molmil
Crystal Structure of pOPH S172A with octanoic acid
Descriptor: CITRIC ACID, OCTANOIC ACID (CAPRYLIC ACID), Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chan, H.C, Ren, F.F, Jia, D.X, Wang, A.H.-J, Guo, R.T, Chen, J, Du, G.C.
Deposit date:2013-11-08
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into enzymatic degradation of oxidized polyvinyl alcohol
Chembiochem, 15, 2014
3WL7
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BU of 3wl7 by Molmil
The complex structure of pOPH S172C with ligand, ACA
Descriptor: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase, pentane-2,4-dione
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chan, H.C, Ren, F.F, Jia, D.X, Wang, A.H.-J, Guo, R.T, Chen, J, Du, G.C.
Deposit date:2013-11-08
Release date:2014-09-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural insights into enzymatic degradation of oxidized polyvinyl alcohol
Chembiochem, 15, 2014
3WL6
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BU of 3wl6 by Molmil
Crystal Structure of pOPH Native
Descriptor: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chan, H.C, Ren, F.F, Jia, D.X, Wang, A.H.-J, Guo, R.T, Chen, J, Du, G.C.
Deposit date:2013-11-08
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into enzymatic degradation of oxidized polyvinyl alcohol
Chembiochem, 15, 2014
3R5N
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BU of 3r5n by Molmil
Crystal structure of PPARgammaLBD complexed with the agonist magnolol
Descriptor: 5,5'-di(prop-2-en-1-yl)biphenyl-2,2'-diol, Peroxisome proliferator-activated receptor gamma
Authors:Zhang, H, Chen, L, Chen, J, Hu, L, Jiang, H, Shen, X.
Deposit date:2011-03-18
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular determinants of magnolol targeting both RXR(alpha) and PPAR(gamma).
Plos One, 6, 2011
3BYC
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BU of 3byc by Molmil
Joint neutron and X-ray structure of diisopropyl fluorophosphatase. Deuterium occupancies are 1-Q, where Q is occupancy of H
Descriptor: CALCIUM ION, Diisopropyl-fluorophosphatase
Authors:Blum, M.-M, Mustyakimov, M, Ruterjans, H, Schoenborn, B.P, Langan, P, Chen, J.C.-H.
Deposit date:2008-01-15
Release date:2009-01-27
Last modified:2024-02-21
Method:NEUTRON DIFFRACTION (2.2 Å), X-RAY DIFFRACTION
Cite:Rapid determination of hydrogen positions and protonation states of diisopropyl fluorophosphatase by joint neutron and X-ray diffraction refinement.
Proc.Natl.Acad.Sci.Usa, 106, 2009
3WWE
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BU of 3wwe by Molmil
The complex of pOPH with PEG
Descriptor: 2-(2-ETHOXYETHOXY)ETHANOL, Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
3WP0
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BU of 3wp0 by Molmil
Crystal structure of Dlg GK in complex with a phosphor-Lgl2 peptide
Descriptor: Disks large homolog 4, GLYCEROL, Lethal(2) giant larvae protein homolog 2
Authors:Zhu, J, Shang, Y, Wan, Q, Xia, Y, Chen, J, Du, Q, Zhang, M.
Deposit date:2014-01-08
Release date:2014-03-19
Last modified:2014-04-30
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:Phosphorylation-dependent interaction between tumor suppressors Dlg and Lgl
Cell Res., 24, 2014
1M4M
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BU of 1m4m by Molmil
Mouse Survivin
Descriptor: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5, ZINC ION
Authors:Muchmore, S.W, Chen, J, Jakob, C, Zakula, D, Matayoshi, E.D, Wu, W, Zhang, H, Li, F, Ng, S.C, Altieri, D.C.
Deposit date:2002-07-03
Release date:2002-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:CRYSTAL STRUCTURE AND MUTAGENIC ANALYSIS OF THE INHIBITOR-OF-APOPTOSIS PROTEIN SURVIVIN
MOL.CELL, 6, 2000
3WWD
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BU of 3wwd by Molmil
The complex of pOPH_S172C with DMSO
Descriptor: CITRIC ACID, DIMETHYL SULFOXIDE, Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
3WWC
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BU of 3wwc by Molmil
The complex of pOPH_S172A of pNPB
Descriptor: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase, butanoic acid
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
4FC1
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BU of 4fc1 by Molmil
Ultra-high resolution neutron structure of crambin at room-temperature
Descriptor: Crambin
Authors:Kovalevsky, A.Y, Chen, J.C.-H.
Deposit date:2012-05-23
Release date:2012-09-19
Last modified:2018-06-06
Method:NEUTRON DIFFRACTION (1.1 Å)
Cite:Direct observation of hydrogen atom dynamics and interactions by ultrahigh resolution neutron protein crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
3NAW
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BU of 3naw by Molmil
Crystal structure of E. coli O157:H7 effector protein NleL
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Lin, D.Y, Chen, J.
Deposit date:2010-06-02
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical and Structural Studies of a HECT-like Ubiquitin Ligase from Escherichia coli O157:H7.
J.Biol.Chem., 286, 2011
4AU6
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BU of 4au6 by Molmil
Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
Descriptor: RNA-DEPENDENT RNA POLYMERASE
Authors:Estrozi, L.F, Settembre, E.C, Goret, G, McClain, B, Zhang, X, Chen, J.Z, Grigorieff, N, Harrison, S.C.
Deposit date:2012-05-14
Release date:2012-06-13
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Location of the Dsrna-Dependent Polymerase, Vp1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
4YL9
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BU of 4yl9 by Molmil
Crystal Structure of wild-type of hsp14.1 from Sulfolobus solfatataricus P2
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Heat shock protein Hsp20
Authors:Liu, L, Chen, J.Y, Yun, C.H.
Deposit date:2015-03-05
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.353 Å)
Cite:Active-State Structures of a Small Heat-Shock Protein Revealed a Molecular Switch for Chaperone Function
Structure, 23, 2015
4YLC
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BU of 4ylc by Molmil
Crystal Structure of Del-C4 mutant of hsp14.1 from Sulfolobus solfatataricus P2
Descriptor: CHLORIDE ION, Heat shock protein Hsp20
Authors:Liu, L, Chen, J.Y, Yun, C.H.
Deposit date:2015-03-05
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Active-State Structures of a Small Heat-Shock Protein Revealed a Molecular Switch for Chaperone Function
Structure, 23, 2015
4YLB
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BU of 4ylb by Molmil
Crystal Structure of A102D mutant of hsp14.1 from Sulfolobus solfatataricus P2
Descriptor: CHLORIDE ION, Heat shock protein Hsp20
Authors:Liu, L, Chen, J.Y, Yun, C.H.
Deposit date:2015-03-05
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Active-State Structures of a Small Heat-Shock Protein Revealed a Molecular Switch for Chaperone Function
Structure, 23, 2015
3C6R
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BU of 3c6r by Molmil
Low pH Immature Dengue Virus
Descriptor: Envelope protein, Peptide pr
Authors:Yu, I, Zhang, W, Holdway, H.A, Li, L, Kostyuchenko, V.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
Deposit date:2008-02-05
Release date:2008-04-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Structure of the immature dengue virus at low pH primes proteolytic maturation
Science, 319, 2008
6C06
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BU of 6c06 by Molmil
Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J, Lilic, M.
Deposit date:2017-12-27
Release date:2018-03-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.15 Å)
Cite:Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts.
Elife, 7, 2018
6C05
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BU of 6c05 by Molmil
Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J, Lilic, M.
Deposit date:2017-12-27
Release date:2018-03-28
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (5.15 Å)
Cite:Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts.
Elife, 7, 2018

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