Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1055 results

6YYR
DownloadVisualize
BU of 6yyr by Molmil
Structure of Cathepsin S in complex with Compound 20b
Descriptor: (2~{R})-~{N}-(2-azanylideneethyl)-2-[2-(3-methyl-1,2-oxazol-5-yl)ethanoylamino]-3-(4-pyridin-2-ylpiperazin-1-yl)sulfonyl-propanamide, 1,2-ETHANEDIOL, CITRATE ANION, ...
Authors:Wagener, M, Schade, M, Merla, B, Hars, U, Kueckelhaus, S.Q.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Highly Selective Sub-Nanomolar Cathepsin S Inhibitors by Merging Fragment Binders with Nitrile Inhibitors.
J.Med.Chem., 63, 2020
4KAH
DownloadVisualize
BU of 4kah by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 4-bromo-1H-pyrazole
Descriptor: 4-bromo-1H-pyrazole, ADENOSINE, BROMIDE ION, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-22
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 4-bromo-1H-pyrazole
To be Published
8OK8
DownloadVisualize
BU of 8ok8 by Molmil
Variant Surface Glycoprotein VSG615
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein 615, ...
Authors:Zeelen, J.P, Stebbins, C.E, Chandra, M.
Deposit date:2023-03-27
Release date:2023-09-13
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
6Z3S
DownloadVisualize
BU of 6z3s by Molmil
Crystal structure of delta466-491 cystathionine beta-synthase from Toxoplasma gondii with O-Acetylserine
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine beta-synthase
Authors:Fernandez-Rodriguez, C, Oyenarte, I, Conter, C, Gonzalez-Recio, I, Quintana, I, Martinez-Chantar, M, Astegno, A, Martinez-Cruz, L.A.
Deposit date:2020-05-21
Release date:2021-06-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.048 Å)
Cite:Structural insight into the unique conformation of cystathionine beta-synthase from Toxoplasma gondii .
Comput Struct Biotechnol J, 19, 2021
4K8K
DownloadVisualize
BU of 4k8k by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 1-(4-methoxyphenyl)-1-cyclopropane and 2-aminoperimidine
Descriptor: 1-(4-methoxyphenyl)cyclopropanecarboxylic acid, 1H-perimidin-2-amine, ADENOSINE, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-18
Release date:2013-05-01
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 1-(4-methoxyphenyl)-1-cyclopropane and 2-aminoperimidine
To be Published
4K8C
DownloadVisualize
BU of 4k8c by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with ADP
Descriptor: ADENOSINE, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-18
Release date:2013-05-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with ADP
To be Published
4K93
DownloadVisualize
BU of 4k93 by Molmil
CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE
Descriptor: ADENOSINE, DIMETHYL SULFOXIDE, N-(hydroxymethyl)benzamide, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-19
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE
To be Published
4KBE
DownloadVisualize
BU of 4kbe by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with benzoguanamine
Descriptor: 6-phenyl-1,3,5-triazine-2,4-diamine, ADENOSINE, DIMETHYL SULFOXIDE, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-23
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with benzoguanamine
To be Published
6ZS7
DownloadVisualize
BU of 6zs7 by Molmil
Crystal structure of delta466-491 cystathionine beta-synthase from Toxoplasma gondii with L-cysteine
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine beta-synthase
Authors:Fernandez-Rodriguez, C, Oyenarte, I, Conter, C, Gonzalez-Recio, I, Quintana, I, Martinez-Chantar, M, Astegno, A, Martinez-Cruz, L.A.
Deposit date:2020-07-15
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural insight into the unique conformation of cystathionine beta-synthase from Toxoplasma gondii .
Comput Struct Biotechnol J, 19, 2021
7N31
DownloadVisualize
BU of 7n31 by Molmil
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, K.S, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
Deposit date:2021-05-31
Release date:2021-07-14
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7N2U
DownloadVisualize
BU of 7n2u by Molmil
Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, K.S, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
Deposit date:2021-05-29
Release date:2021-07-14
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7N1P
DownloadVisualize
BU of 7n1p by Molmil
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, S.K, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
Deposit date:2021-05-28
Release date:2021-07-14
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.33 Å)
Cite:Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7N2V
DownloadVisualize
BU of 7n2v by Molmil
Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, K.S, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
Deposit date:2021-05-29
Release date:2021-07-14
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7BTJ
DownloadVisualize
BU of 7btj by Molmil
Crystal structure of Pennisetum glaucum monodehydroascorbate reductase in complex with FADH2
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pennisetum glaucum monodehydroascorbate reductase
Authors:Sonkar, K.S, Achary, M.M, Reddy, M.K, Arulandu, A.
Deposit date:2020-04-01
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:Crystal structure of Pennisetum glaucum monodehydroascorbate reductase
To Be Published
7BVI
DownloadVisualize
BU of 7bvi by Molmil
Crystal structure of Pennisetum glaucum monodehydroascorbate reductase
Descriptor: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, Pennisetum glaucum monodehydroascorbate reductase
Authors:Sonkar, K.S, Arulandu, A, Achary, M.M, Reddy, M.K.
Deposit date:2020-04-10
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.391 Å)
Cite:Biochemical and structural characterization of a robust and thermostable ascorbate recycling monodehydroascorbate reductase (MDHAR) from stress adapted pearl millet.
Biochem.Biophys.Res.Commun., 662, 2023
7AA5
DownloadVisualize
BU of 7aa5 by Molmil
Human TRPV4 structure in presence of 4a-PDD
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily V member 4,Green fluorescent protein
Authors:Botte, M, Ulrich, A.K.G, Adaixo, R, Gnutt, D, Brockmann, A, Bucher, D, Chami, M, Bocquet, M, Ebbinghaus-Kintscher, U, Puetter, V, Becker, A, Egner, U, Stahlberg, H, Hennig, M, Holton, S.J.
Deposit date:2020-09-03
Release date:2021-08-18
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Cryo-EM structural studies of the agonist complexed human TRPV4 ion-channel reveals novel structural rearrangements resulting in an open-conformation
To Be Published
4LCA
DownloadVisualize
BU of 4lca by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with thymidine
Descriptor: ADENOSINE, DIMETHYL SULFOXIDE, POTASSIUM ION, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-06-21
Release date:2013-07-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with thymidine
To be Published
4LBX
DownloadVisualize
BU of 4lbx by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with cytidine
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, ADENOSINE, DIMETHYL SULFOXIDE, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-06-21
Release date:2013-07-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with cytidine
To be Published
4LNH
DownloadVisualize
BU of 4lnh by Molmil
Crystal structure of uridine phosphorylase from Vibrio fischeri ES114, NYSGRC Target 29520.
Descriptor: GLYCEROL, SULFATE ION, Uridine phosphorylase
Authors:Malashkevich, V.N, Bonanno, J.B, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-07-11
Release date:2013-07-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of uridine phosphorylase from Vibrio fischeri ES114, NYSGRC Target 29520.
To be Published
4LBG
DownloadVisualize
BU of 4lbg by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with adenosine
Descriptor: ADENOSINE, DIMETHYL SULFOXIDE, POTASSIUM ION, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-06-20
Release date:2013-07-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with adenosine
To be Published
4LN1
DownloadVisualize
BU of 4ln1 by Molmil
CRYSTAL STRUCTURE OF L-lactate dehydrogenase from Bacillus cereus ATCC 14579 complexed with calcium, NYSGRC Target 029452
Descriptor: CALCIUM ION, L-lactate dehydrogenase 1
Authors:Malashkevich, V.N, Bonanno, J.B, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-07-11
Release date:2013-07-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of L-lactate dehydrogenase from Bacillus cereus ATCC 14579 complexed with calcium, NYSGRC Target 029452
To be Published
6TH8
DownloadVisualize
BU of 6th8 by Molmil
Reconstructing the Origins of the HemD-like fold
Descriptor: cU3Sd
Authors:Coles, M, Toledo-Patino, S, Chaubey, M, Hocker, B.
Deposit date:2019-11-19
Release date:2019-11-27
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Reconstructing the Remote Origins of a Fold Singleton from a Flavodoxin-Like Ancestor.
Biochemistry, 58, 2019
6GL2
DownloadVisualize
BU of 6gl2 by Molmil
Structure of ZgEngAGH5_4 wild type at 1.2 Angstrom resolution
Descriptor: Endoglucanase, family GH5, IMIDAZOLE
Authors:Dorival, J, Ruppert, S, Gunnoo, M, Orlowski, A, Chapelais, M, Dabin, J, Labourel, A, Thompson, D, Michel, G, Czjzek, M, Genicot, S.
Deposit date:2018-05-22
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The laterally acquired GH5ZgEngAGH5_4from the marine bacteriumZobellia galactanivoransis dedicated to hemicellulose hydrolysis.
Biochem. J., 475, 2018
4LC4
DownloadVisualize
BU of 4lc4 by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with guanosine
Descriptor: ADENOSINE, DIMETHYL SULFOXIDE, GUANOSINE, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-06-21
Release date:2013-07-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with guanosine
To be Published
4LNA
DownloadVisualize
BU of 4lna by Molmil
CRYSTAL STRUCTURE OF purine nucleoside phosphorylase I from Spirosoma linguale DSM 74, NYSGRC Target 029362
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENINE, CHLORIDE ION, ...
Authors:Malashkevich, V.N, Bonanno, J.B, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-07-11
Release date:2013-07-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of purine nucleoside phosphorylase I from Spirosoma linguale DSM 74, NYSGRC Target 029362
To be Published

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon