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PDB: 207 results

1XI3
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Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001
Descriptor: NICKEL (II) ION, SULFATE ION, Thiamine phosphate pyrophosphorylase, ...
Authors:Zhou, W, Chen, L, Tempel, W, Liu, Z.-J, Habel, J, Lee, D, Lin, D, Chang, S.-H, Dillard, B.D, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Kelley, L.-L.C, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-21
Release date:2004-09-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001
To be published
5N88
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Crystal structure of antibody bound to viral protein
Descriptor: PC4 and SFRS1-interacting protein, VH59 antibody
Authors:Bao, L, Hannon, C, Cruz-Migoni, A, Ptchelkine, D, Sun, M.-y, Derveni, M, Bunjobpol, W, Chambers, J.S, Simmons, A, Phillips, S.E.V, Rabbitts, T.H.
Deposit date:2017-02-23
Release date:2017-12-20
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Intracellular immunization against HIV infection with an intracellular antibody that mimics HIV integrase binding to the cellular LEDGF protein.
Sci Rep, 7, 2017
5U3F
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Structure of Mycobacterium tuberculosis IlvE, a branched-chain amino acid transaminase, in complex with D-cycloserine derivative
Descriptor: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Branched-chain-amino-acid aminotransferase
Authors:Favrot, L, Amorim Franco, T.M, Blanchard, J.S.
Deposit date:2016-12-02
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Mechanism-Based Inhibition of the Mycobacterium tuberculosis Branched-Chain Aminotransferase by d- and l-Cycloserine.
ACS Chem. Biol., 12, 2017
1VK1
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Conserved hypothetical protein from Pyrococcus furiosus Pfu-392566-001
Descriptor: Conserved hypothetical protein, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Shah, A, Liu, Z.J, Tempel, W, Chen, L, Lee, D, Yang, H, Chang, J, Zhao, M, Ng, J, Rose, J, Brereton, P.S, Izumi, M, Jenney Jr, F.E, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Richardson, D.C, Richardson, J.S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-04-13
Release date:2004-08-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:(NZ)CH...O contacts assist crystallization of a ParB-like nuclease.
Bmc Struct.Biol., 7, 2007
7ULN
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BU of 7uln by Molmil
Turnip yellows virus N-terminal readthrough domain
Descriptor: Minor capsid protein P3-RTD
Authors:Schiltz, C.J, Chappie, J.S.
Deposit date:2022-04-05
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids
Nat Commun, 13, 2022
7ULO
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BU of 7ulo by Molmil
Potato leafroll virus N-terminal readthrough domain
Descriptor: Minor capsid protein P3-RTD, SULFATE ION
Authors:Schiltz, C.J, Chappie, J.S.
Deposit date:2022-04-05
Release date:2022-11-02
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids
Nat Commun, 13, 2022
3GUB
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BU of 3gub by Molmil
Crystal structure of DAPKL93G complexed with N6-(2-Phenylethyl)adenosine
Descriptor: 9-alpha-L-lyxofuranosyl-N-(2-phenylethyl)-9H-purin-6-amine, Death-associated protein kinase 1, SULFATE ION
Authors:McNamara, L.K, Schumacher, A.M, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-29
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structures of the DAPK gatekeeper mutant complexed with N6-modified adenosine analogs.
To be Published
3GU7
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BU of 3gu7 by Molmil
Crystal structure of DAPKQ23V-ADP-Mg2+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Death-associated protein kinase 1, MAGNESIUM ION
Authors:McNamara, L.K, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzyme activity and crystallographic analyses of a glycine-rich loop mutant of DAPK
To be Published
3GU5
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Crystal structure of DAPKQ23V-AMPPNP-Mg2+
Descriptor: Death-associated protein kinase 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:McNamara, L.K, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Enzyme activity and crystallographic analyses of a glycine-rich loop mutant of DAPK
To be Published
3GU8
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BU of 3gu8 by Molmil
Crystal structure of DAPKL93G with N6-cyclopentyladenosine
Descriptor: Death-associated protein kinase 1, N6-cyclopentyladenosine
Authors:McNamara, L.K, Schumacher, A.M, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the DAPK gatekeeper mutant with N6-modified adenosine analogs.
To be Published
3GU4
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BU of 3gu4 by Molmil
Crystal structure of DAPKQ23V-AMPPNP
Descriptor: Death-associated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:McNamara, L.K, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Enzymatic activity and crystallgoraphic analyses of a glycine-rich loop mutant of DAPK
To be Published
3GU6
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BU of 3gu6 by Molmil
Crystal structure of DAPKQ23V-ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Death-associated protein kinase 1
Authors:McNamara, L.K, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Enzymatic activity and crystallographic analyses of a glycine-rich loop mutant of DAPK
To be Published
3TUC
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BU of 3tuc by Molmil
Crystal structure of SYK kinase domain with 1-benzyl-N-(5-(6,7-dimethoxyquinolin-4-yloxy)pyridin-2-yl)-2-oxo-1,2-dihydropyridine-3-carboxamide
Descriptor: 1-benzyl-N-{5-[(6,7-dimethoxyquinolin-4-yl)oxy]pyridin-2-yl}-2-oxo-1,2-dihydropyridine-3-carboxamide, Tyrosine-protein kinase SYK
Authors:Lovering, F, McDonald, J, Whitlock, G, Glossop, P, Phillips, C, Sabnis, Y, Ryan, M, Fitz, L, Lee, J, Chang, J.S, Han, S, Kurumbail, R, Thorarenson, A.
Deposit date:2011-09-16
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of Type-II Inhibitors Using Kinase Structures.
Chem.Biol.Drug Des., 80, 2012
6C30
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BU of 6c30 by Molmil
Mycobacterium smegmatis RimJ (apo form)
Descriptor: CHLORIDE ION, GLYCEROL, GNAT family acetyltransferase
Authors:Favrot, L, Hegde, S.S, Blanchard, J.S.
Deposit date:2018-01-09
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.397 Å)
Cite:Structural Characterization of Mycobacterium smegmatis RimJ, an N-acetyltransferase protein
To Be Published
6C32
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BU of 6c32 by Molmil
Mycobacterium smegmatis RimJ with AcCoA
Descriptor: ACETYL COENZYME *A, Acetyltransferase, GNAT family protein
Authors:Favrot, L, Hegde, S.S, Blanchard, J.S.
Deposit date:2018-01-09
Release date:2019-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Structural Characterization of Mycobacterium smegmatis RimJ, an N-acetyltransferase protein
To Be Published
6C5D
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BU of 6c5d by Molmil
N-terminal domain of Helicobacter pylori LlaJI.R1
Descriptor: LlaJI.R1
Authors:Hosford, C.J, Chappie, J.S.
Deposit date:2018-01-16
Release date:2018-06-27
Last modified:2018-08-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The crystal structure of theHelicobacter pyloriLlaJI.R1 N-terminal domain provides a model for site-specific DNA binding.
J. Biol. Chem., 293, 2018
6C37
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BU of 6c37 by Molmil
Mycobacterium smegmatis RimJ in complex with CoA-disulfide
Descriptor: Acetyltransferase, GNAT family protein, [[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[3-[2-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyldisulfanyl]ethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate
Authors:Favrot, L, Hegde, S.S, Blanchard, J.S.
Deposit date:2018-01-09
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Structural Characterization of Mycobacterium smegmatis RimJ, an N-acetyltransferase protein
To Be Published
3TUD
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BU of 3tud by Molmil
Crystal structure of SYK kinase domain with N-(4-methyl-3-(8-methyl-7-oxo-2-(phenylamino)-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl)phenyl)-3-(trifluoromethyl)benzamide
Descriptor: N-{4-methyl-3-[8-methyl-7-oxo-2-(phenylamino)-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl]phenyl}-3-(trifluoromethyl)benzamide, Tyrosine-protein kinase SYK
Authors:Lovering, F, McDonald, J, Whitlock, G, Glossop, P, Phillips, C, Sabnis, Y, Ryan, M, Fitz, L, Lee, J, Chang, J.S, Han, S, Kurumbail, R, Thorarenson, A.
Deposit date:2011-09-16
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Identification of Type-II Inhibitors Using Kinase Structures.
Chem.Biol.Drug Des., 80, 2012
6DJQ
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BU of 6djq by Molmil
Vps1 GTPase-BSE fusion complexed with GDP.AlF4-
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
Authors:Varlakhanova, N.V, Brady, T.M, Tornabene, B.A, Hosford, C.J, Chappie, J.S, Ford, M.G.J.
Deposit date:2018-05-25
Release date:2018-08-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
J. Cell Biol., 217, 2018
2SOD
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BU of 2sod by Molmil
DETERMINATION AND ANALYSIS OF THE 2 ANGSTROM STRUCTURE OF COPPER, ZINC SUPEROXIDE DISMUTASE
Descriptor: COPPER (II) ION, COPPER,ZINC SUPEROXIDE DISMUTASE, ZINC ION
Authors:Tainer, J.A, Getzoff, E.D, Richardson, J.S, Richardson, D.C.
Deposit date:1980-03-25
Release date:1980-05-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Determination and analysis of the 2 A-structure of copper, zinc superoxide dismutase.
J.Mol.Biol., 160, 1982
3O45
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Crystal Structure of 101F Fab Bound to 17-mer Peptide Epitope
Descriptor: Fusion glycoprotein F1, Mouse monoclonal antibody 101F 101F Fab heavy chain, Mouse monoclonal antibody 101F 101F Fab light chain, ...
Authors:McLellan, J.S, Chen, M, Chang, J.S, Yang, Y, Kim, A, Graham, B.S, Kwong, P.D.
Deposit date:2010-07-26
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.872 Å)
Cite:Structure of a Major Antigenic Site on the Respiratory Syncytial Virus Fusion Glycoprotein in Complex with Neutralizing Antibody 101F.
J.Virol., 84, 2010
3O41
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BU of 3o41 by Molmil
Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope
Descriptor: Fusion glycoprotein F1, Mouse monoclonal antibody 101F Fab heavy chain, Mouse monoclonal antibody 101F Fab light chain, ...
Authors:McLellan, J.S, Chen, M, Chang, J.S, Yang, Y, Kim, A, Graham, B.S, Kwong, P.D.
Deposit date:2010-07-26
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of a Major Antigenic Site on the Respiratory Syncytial Virus Fusion Glycoprotein in Complex with Neutralizing Antibody 101F.
J.Virol., 84, 2010
3IQA
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Crystal Structure of BlaC covalently bound with Doripenem
Descriptor: (2S,3R,4S)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-4-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Beta-lactamase, PHOSPHATE ION
Authors:Tremblay, L.W, Blanchard, J.S.
Deposit date:2009-08-19
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural characterization of Mycobacterium tuberculosis beta-lactamase with the carbapenems ertapenem and doripenem.
Biochemistry, 49, 2010
3HT5
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BU of 3ht5 by Molmil
Crystal Structure of IlvE a Branched Chain Amino Acid Transaminase from Mycobacterium tuberculosis
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, branched-chain-amino-acid aminotransferase
Authors:Tremblay, L.W, Blanchard, J.S.
Deposit date:2009-06-11
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9 A structure of the branched-chain amino-acid transaminase (IlvE) from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 65, 2009
1VJK
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Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001
Descriptor: molybdopterin converting factor, subunit 1
Authors:Chen, L, Liu, Z.J, Tempel, W, Shah, A, Lee, D, Rose, J.P, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Richardson, D.C, Richardson, J.S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-03-10
Release date:2004-08-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001 '
To be published

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