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PDB: 34 results

1HV2
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BU of 1hv2 by Molmil
SOLUTION STRUCTURE OF YEAST ELONGIN C IN COMPLEX WITH A VON HIPPEL-LINDAU PEPTIDE
Descriptor: ELONGIN C, VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR
Authors:Botuyan, M.V, Mer, G, Yi, G.-S, Koth, C.M, Case, D.A, Edwards, A.M, Chazin, W.J, Arrowsmith, C.H.
Deposit date:2001-01-05
Release date:2001-09-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and dynamics of yeast elongin C in complex with a von Hippel-Lindau peptide.
J.Mol.Biol., 312, 2001
1XOB
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THIOREDOXIN (REDUCED DITHIO FORM), NMR, 20 STRUCTURES
Descriptor: THIOREDOXIN
Authors:Jeng, M.-F, Campbell, A.P, Begley, T, Holmgren, A, Case, D.A, Wright, P.E, Dyson, H.J.
Deposit date:1995-11-28
Release date:1996-06-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:High-resolution solution structures of oxidized and reduced Escherichia coli thioredoxin.
Structure, 2, 1994
1XOA
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THIOREDOXIN (OXIDIZED DISULFIDE FORM), NMR, 20 STRUCTURES
Descriptor: THIOREDOXIN
Authors:Jeng, M.-F, Campbell, A.P, Begley, T, Holmgren, A, Case, D.A, Wright, P.E, Dyson, H.J.
Deposit date:1995-11-28
Release date:1996-06-10
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:High-resolution solution structures of oxidized and reduced Escherichia coli thioredoxin.
Structure, 2, 1994
1ZNF
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BU of 1znf by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN
Descriptor: 31ST ZINC FINGER FROM XFIN, ZINC ION
Authors:Lee, M.S, Gippert, G.P, Soman, K.V, Case, D.A, Wright, P.E.
Deposit date:1989-09-25
Release date:1991-07-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of a single zinc finger DNA-binding domain.
Science, 245, 1989
9PCY
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BU of 9pcy by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF REDUCED FRENCH BEAN PLASTOCYANIN AND COMPARISON WITH THE CRYSTAL STRUCTURE OF POPLAR PLASTOCYANIN
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Moore, J.M, Lepre, C.A, Gippert, G.P, Chazin, W.J, Case, D.A, Wright, P.E.
Deposit date:1991-03-18
Release date:1993-10-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution solution structure of reduced French bean plastocyanin and comparison with the crystal structure of poplar plastocyanin.
J.Mol.Biol., 221, 1991
6WXH
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BU of 6wxh by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
Descriptor: Colicin-E1, Outer membrane protein TolC
Authors:Kaelber, J.T, Budiardjo, S.J, Firlar, E, Case, D.A, Ikujuni, A.P, Slusky, J.S.G.
Deposit date:2020-05-10
Release date:2021-05-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
1TF3
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BU of 1tf3 by Molmil
TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES
Descriptor: 5S RNA GENE, TRANSCRIPTION FACTOR IIIA, ZINC ION
Authors:Foster, M.P, Wuttke, D.S, Radhakrishnan, I, Case, D.A, Gottesfeld, J.M, Wright, P.E.
Deposit date:1997-07-01
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA.
Nat.Struct.Biol., 4, 1997
1DSM
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(-)-duocarmycin SA covalently linked to duplex DNA
Descriptor: 4-HYDROXY-8-METHYL-6-(4,5,6-TRIMETHOXY-1H-INDOLE-2-CARBONYL)-3,6,7,8-TETRAHYDRO-3,6-DIAZA-AS-INDACENE-2-CARBOXYLIC ACID METHYL ESTER, 5'-D(*GP*AP*CP*TP*AP*AP*TP*TP*GP*AP*C)-3', 5'-D(*GP*TP*CP*AP*AP*TP*TP*AP*GP*TP*C)-3'
Authors:Smith, J.A, Case, D.A, Chazin, W.J.
Deposit date:1999-03-27
Release date:1999-04-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The structural basis for in situ activation of DNA alkylation by duocarmycin SA
J.Mol.Biol., 300, 2000
1DSA
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(+)-DUOCARMYCIN SA COVALENTLY LINKED TO DUPLEX DNA, NMR, 20 STRUCTURES
Descriptor: 4-HYDROXY-8-METHYL-6-(4,5,6-TRIMETHOXY-1H-INDOLE-2-CARBONYL)-3,6,7,8-TETRAHYDRO-3,6-DIAZA-AS-INDACENE-2-CARBOXYLIC ACID METHYL ESTER, DNA (5'-D(*GP*AP*CP*TP*AP*AP*TP*TP*GP*AP*C)-3', 5'-D(*GP*TP*CP*AP*AP*TP*TP*AP*GP*TP*C)-3')
Authors:Eis, P.S, Smith, J.A, Case, D.A, Chazin, W.J.
Deposit date:1997-05-08
Release date:1997-08-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High resolution solution structure of a DNA duplex alkylated by the antitumor agent duocarmycin SA.
J.Mol.Biol., 272, 1997
1DGQ
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NMR SOLUTION STRUCTURE OF THE INSERTED DOMAIN OF HUMAN LEUKOCYTE FUNCTION ASSOCIATED ANTIGEN-1
Descriptor: LEUKOCYTE FUNCTION ASSOCIATED ANTIGEN-1
Authors:Legge, G.B, Kriwacki, R.W, Chung, J, Hommel, U, Ramage, P, Case, D.A, Dyson, H.J, Wright, P.E.
Deposit date:1999-11-24
Release date:2000-02-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR solution structure of the inserted domain of human leukocyte function associated antigen-1.
J.Mol.Biol., 295, 2000
1CNP
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BU of 1cnp by Molmil
THE STRUCTURE OF CALCYCLIN REVEALS A NOVEL HOMODIMERIC FOLD FOR S100 CA2+-BINDING PROTEINS, NMR, 22 STRUCTURES
Descriptor: CALCYCLIN (RABBIT, APO)
Authors:Potts, B.C.M, Smith, J, Akke, M, Macke, T.J, Okazaki, K, Hidaka, H, Case, D.A, Chazin, W.J.
Deposit date:1995-08-31
Release date:1996-10-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of calcyclin reveals a novel homodimeric fold for S100 Ca(2+)-binding proteins.
Nat.Struct.Biol., 2, 1995
8U3M
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BU of 8u3m by Molmil
The FARFAR-MD-NMR ensemble of an HIV-1 TAR excited state
Descriptor: The excited state of HIV-1 transactivation response element (31-MER)
Authors:Geng, A, Ganser, L, Roy, R, Shi, H, Pratihar, S, Case, D.A, Al-Hashimi, H.M.
Deposit date:2023-09-07
Release date:2023-10-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An RNA excited conformational state at atomic resolution.
Nat Commun, 14, 2023
1MYF
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BU of 1myf by Molmil
SOLUTION STRUCTURE OF CARBONMONOXY MYOGLOBIN DETERMINED FROM NMR DISTANCE AND CHEMICAL SHIFT CONSTRAINTS
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Osapay, K, Theriault, Y, Wright, P.E, Case, D.A.
Deposit date:1994-12-02
Release date:1995-02-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of carbonmonoxy myoglobin determined from nuclear magnetic resonance distance and chemical shift constraints.
J.Mol.Biol., 244, 1994
1AX3
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BU of 1ax3 by Molmil
SOLUTION NMR STRUCTURE OF B. SUBTILIS IIAGLC, 16 STRUCTURES
Descriptor: GLUCOSE PERMEASE IIA DOMAIN
Authors:Chen, Y, Case, D.A, Reizer, J, Saier Junior, M.H, Wright, P.E.
Deposit date:1997-10-25
Release date:1998-06-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution solution structure of Bacillus subtilis IIAglc.
Proteins, 31, 1998
1PQQ
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BU of 1pqq by Molmil
NMR Structure of a Cyclic Polyamide-DNA Complex
Descriptor: 45-(3-AMINOPROPYL)-5,11,22,28,34-PENTAMETHYL-3,9,15,20,26,32,38,43-OCTAOXO-2,5,8,14,19,22,25,28,31,34,37,42,45,48-TETRADECAAZA-11-AZONIAHEPTACYCLO[42.2.1.1~4,7~.1~10,13~.1~21,24~.1~27,30~.1~33,36~]DOPENTACONTA-1(46),4(52),6,10(51),12,21(50),23,27(49),29,33(48),35,44(47)-DODECAENE, 5'-D(*CP*GP*CP*TP*AP*AP*CP*AP*GP*GP*C)-3', 5'-D(*GP*CP*CP*TP*GP*TP*TP*AP*GP*CP*G)-3'
Authors:Zhang, Q, Dwyer, T.J, Tsui, V, Case, D.A, Cho, J, Dervan, P.B, Wemmer, D.E.
Deposit date:2003-06-18
Release date:2004-06-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Structure of a Cyclic Polyamide-DNA Complex.
J.Am.Chem.Soc., 126, 2004
1CQO
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NMR STRUCTURE OF THE PALINDROMIC DNA DECAMER D(GCGTTAACGC)2
Descriptor: 5'-d(*GP*CP*GP*TP*TP*AP*AP*CP*GP*C)-3'
Authors:Smith, J.A, Tsui, V.T, Chazin, W.J, Case, D.A.
Deposit date:1999-08-09
Release date:1999-08-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Structure of the Palindromic DNA Decamer d(GCGTTAACGC)2
To be Published
2O80
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BU of 2o80 by Molmil
Duplex DNA containing an abasic site with an opposite dC (alpha anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*CP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7Z
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BU of 2o7z by Molmil
Duplex DNA containing an abasic site with an opposite T (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*TP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O82
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Duplex DNA containing an abasic site with an opposite dC (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*CP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7X
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Duplex DNA containing an abasic site with an opposite G (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*GP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7Y
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BU of 2o7y by Molmil
Duplex DNA containing an abasic site with an opposite T (alpha anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*TP*CP*TP*TP*TP*GP*G)-3'
Authors:Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7W
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BU of 2o7w by Molmil
Duplex DNA containing an abasic site with an opposite G (alpha anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*GP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2LEF
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BU of 2lef by Molmil
LEF1 HMG DOMAIN (FROM MOUSE), COMPLEXED WITH DNA (15BP), NMR, 12 STRUCTURES
Descriptor: DNA (5'-D(*CP*AP*CP*CP*CP*TP*TP*TP*GP*AP*AP*GP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*CP*TP*TP*CP*AP*AP*AP*GP*GP*GP*TP*G)-3'), PROTEIN (LYMPHOID ENHANCER-BINDING FACTOR)
Authors:Li, X, Love, J.J, Case, D.A, Wright, P.E.
Deposit date:1998-10-13
Release date:1998-10-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural basis for DNA bending by the architectural transcription factor LEF-1.
Nature, 376, 1995
2NC4
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BU of 2nc4 by Molmil
Solution Structure of N-Galactosylated Pin1 WW Domain
Descriptor: Pin1 WW Domain, beta-D-galactopyranose
Authors:Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
Deposit date:2016-03-20
Release date:2016-06-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016
2NC5
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BU of 2nc5 by Molmil
Solution Structure of N-Xylosylated Pin1 WW Domain
Descriptor: Pin1 WW Domain, beta-D-xylopyranose
Authors:Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
Deposit date:2016-03-20
Release date:2016-06-08
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016

 

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