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PDB: 2660 results

6BGD
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The crystal structure of the W145A variant of TpMglB-2 (Tp0684) with bound ligand
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glucose/galactose-binding lipoprotein
Authors:Brautigam, C.A, Norgard, M.V, Deka, R.K.
Deposit date:2017-10-27
Release date:2018-01-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal structures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.
Protein Sci., 27, 2018
1OQK
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Structure of Mth11: A homologue of human RNase P protein Rpp29
Descriptor: conserved protein MTH11
Authors:Boomershine, W.P, McElroy, C.A, Tsai, H, Gopalan, V, Foster, M.P.
Deposit date:2003-03-10
Release date:2004-01-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P.
Proc.Natl.Acad.Sci.Usa, 100, 2003
2KNJ
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BU of 2knj by Molmil
NMR structure of microplusin a antimicrobial peptide from Rhipicephalus (Boophilus) microplus
Descriptor: Microplusin preprotein
Authors:Pires, J.R, Rezende, C.A, Silva, F.D, Daffre, S.
Deposit date:2009-08-26
Release date:2009-10-13
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure and mode of action of microplusin, a copper II-chelating antimicrobial peptide from the cattle tick Rhipicephalus (Boophilus) microplus.
J.Biol.Chem., 284, 2009
3SU1
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Crystal structure of NS3/4A protease variant D168A in complex with danoprevir
Descriptor: (2R,6S,12Z,13aS,14aR,16aS)-6-[(tert-butoxycarbonyl)amino]-14a-[(cyclopropylsulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8 ,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-2-yl 4-fluoro-2H-isoindole-2-carboxylate, Genome polyprotein, SULFATE ION, ...
Authors:Schiffer, C.A, Romano, K.P.
Deposit date:2011-07-11
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:The Molecular Basis of Drug Resistance against Hepatitis C Virus NS3/4A Protease Inhibitors.
Plos Pathog., 8, 2012
6B4F
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Crystal structure of human Gle1 CTD-Nup42 GBM complex
Descriptor: CHLORIDE ION, Nucleoporin GLE1, Nucleoporin like 2, ...
Authors:Lin, D.H, Correia, A.R, Cai, S.W, Huber, F.M, Jette, C.A, Hoelz, A.
Deposit date:2017-09-26
Release date:2018-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.811 Å)
Cite:Structural and functional analysis of mRNA export regulation by the nuclear pore complex.
Nat Commun, 9, 2018
6B4K
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Crystal structure of human DDX19B(AMPPNP)
Descriptor: ATP-dependent RNA helicase DDX19B, MAGNESIUM ION, MALONATE ION, ...
Authors:Lin, D.H, Correia, A.R, Cai, S.W, Huber, F.M, Jette, C.A, Hoelz, A.
Deposit date:2017-09-26
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional analysis of mRNA export regulation by the nuclear pore complex.
Nat Commun, 9, 2018
2K95
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Solution structure of the wild-type P2B-P3 pseudoknot of human telomerase RNA
Descriptor: Telomerase RNA P2b-P3 pseudoknot
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
4EP2
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Crystal Structure of inactive single chain wild-type HIV-1 Protease in Complex with the substrate RT-RH
Descriptor: GLYCEROL, PHOSPHATE ION, protease, ...
Authors:Schiffer, C.A, Mittal, S.
Deposit date:2012-04-16
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural, kinetic, and thermodynamic studies of specificity designed HIV-1 protease.
Protein Sci., 21, 2012
1OJJ
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Anatomy of glycosynthesis: Structure and kinetics of the Humicola insolens Cel7BE197A and E197S glycosynthase mutants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOGLUCANASE I, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Ducros, V.M.-A, Tarling, C.A, Zechel, D.L, Brzozowski, A.M, Frandsen, T.P, Von Ossowski, I, Schulein, M, Withers, S.G, Davies, G.J.
Deposit date:2003-07-10
Release date:2004-01-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Anatomy of Glycosynthesis: Structure and Kinetics of the Humicola Insolens Cel7B E197A and E197S Glycosynthase Mutants
Chem.Biol., 10, 2003
3SU6
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Crystal structure of NS3/4A protease variant A156T in complex with vaniprevir
Descriptor: (5R,7S,10S)-10-tert-butyl-N-{(1R,2R)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethylcyclopropyl}-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19-dodecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosine-7(3H)-carboxamide, GLYCEROL, NS3 protease, ...
Authors:Schiffer, C.A, Romano, K.P.
Deposit date:2011-07-11
Release date:2012-09-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Molecular Basis of Drug Resistance against Hepatitis C Virus NS3/4A Protease Inhibitors.
Plos Pathog., 8, 2012
2F2G
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BU of 2f2g by Molmil
X-Ray Structure of Gene Product From Arabidopsis Thaliana AT3G16990
Descriptor: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, SEED MATURATION PROTEIN PM36 HOMOLOG, SULFATE ION
Authors:Wesenberg, G.W, Smith, D.W, Phillips Jr, G.N, Johnson, K.A, Bitto, E, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-11-16
Release date:2005-12-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of gene locus At3g16990 from Arabidopsis thaliana
Proteins, 57, 2004
2KRF
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BU of 2krf by Molmil
NMR solution structure of the DNA binding domain of Competence protein A
Descriptor: Transcriptional regulatory protein comA
Authors:Hobbs, C.A, Bobay, B.G, Thompson, R.J, Perego, M, Cavanagh, J.
Deposit date:2009-12-16
Release date:2010-04-07
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR solution structure and DNA-binding model of the DNA-binding domain of competence protein A.
J.Mol.Biol., 398, 2010
4EPJ
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BU of 4epj by Molmil
Crystal Structure of inactive single chain wild-type HIV-1 Protease in Complex with the substrate p2-NC
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Schiffer, C.A, Mittal, S.
Deposit date:2012-04-17
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural, kinetic, and thermodynamic studies of specificity designed HIV-1 protease.
Protein Sci., 21, 2012
6UE3
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BU of 6ue3 by Molmil
Crystal structure of HCV NS3/4A D168A protease in complex with PC (JZ01-15)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NS3 protease, ...
Authors:Zephyr, J, Schiffer, C.A.
Deposit date:2019-09-20
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Avoiding Drug Resistance by Substrate Envelope-Guided Design: Toward Potent and Robust HCV NS3/4A Protease Inhibitors.
Mbio, 11, 2020
4IFW
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BU of 4ifw by Molmil
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, ADP inhibited form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Thiamine biosynthesis lipoprotein ApbE
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2012-12-15
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3001 Å)
Cite:The TP0796 Lipoprotein of Treponema pallidum Is a Bimetal-dependent FAD Pyrophosphatase with a Potential Role in Flavin Homeostasis.
J.Biol.Chem., 288, 2013
2EZM
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BU of 2ezm by Molmil
SOLUTION NMR STRUCTURE OF CYANOVIRIN-N, RESTRAINED REGULARIZED MEAN COORDINATES
Descriptor: CYANOVIRIN-N
Authors:Bewley, C.A, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-06
Release date:1999-05-11
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Solution structure of cyanovirin-N, a potent HIV-inactivating protein.
Nat.Struct.Biol., 5, 1998
2KO8
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BU of 2ko8 by Molmil
The Structure of Anti-TRAP
Descriptor: Tryptophan RNA-binding attenuator protein inhibitory protein, ZINC ION
Authors:McElroy, C.A, Gollnick, P, Foster, M.P.
Deposit date:2009-09-12
Release date:2010-09-22
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Solution Structure of the B. subtilis Anti-TRAP trimer and its Interaction with TRAP
To be Published
4IG1
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Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, Mg(II)-AMP product bound form
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, FAD:protein FMN transferase, ...
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2012-12-15
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4318 Å)
Cite:The TP0796 Lipoprotein of Treponema pallidum Is a Bimetal-dependent FAD Pyrophosphatase with a Potential Role in Flavin Homeostasis.
J.Biol.Chem., 288, 2013
2F8K
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Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
Descriptor: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
Authors:Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
Deposit date:2005-12-02
Release date:2006-01-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
6UJP
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P-glycoprotein mutant-F979A and C952A-with BDE100
Descriptor: 2,4-dibromophenyl 2,4,6-tribromophenyl ether, ATP-dependent translocase ABCB1
Authors:Aller, S.G, Le, C.A.
Deposit date:2019-10-03
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.98 Å)
Cite:Structural definition of polyspecific compensatory ligand recognition by P-glycoprotein.
Iucrj, 7, 2020
6UKX
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STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound 11
Descriptor: 4,4'-{propane-1,3-diylbis[oxy(5-methoxy-1-benzothiene-6,2-diyl)]}bis(4-oxobutanoic acid), fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-06
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
6UKZ
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STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound 6
Descriptor: 4-[5-(2-{[2-(3-carboxypropanoyl)-4-fluoro-6-methoxy-1-benzothiophen-5-yl]oxy}ethoxy)-6-methoxy-1-benzothiophen-2-yl]-4-oxobutanoic acid, fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-06
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
6UKW
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STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound 10
Descriptor: 4-[6-(3-{[2-(3-carboxypropanoyl)-4-fluoro-6-methoxy-1-benzothiophen-5-yl]oxy}propoxy)-5-methoxy-1-benzothiophen-2-yl]-4-oxobutanoic acid, fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-06
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
4IFX
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Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, FAD substrate bound form
Descriptor: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2012-12-15
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:The TP0796 Lipoprotein of Treponema pallidum Is a Bimetal-dependent FAD Pyrophosphatase with a Potential Role in Flavin Homeostasis.
J.Biol.Chem., 288, 2013
4IHU
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Reduced form of disulfide bond oxdioreductase (DsbG) from Mycobacterium tuberculosis
Descriptor: CHLORIDE ION, Isomerase DsbG
Authors:Harmston, C.A, Goulding, C.W.
Deposit date:2012-12-19
Release date:2013-10-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Structural and biochemical characterization of the essential DsbA-like disulfide bond forming protein from Mycobacterium tuberculosis.
Bmc Struct.Biol., 13, 2013

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