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PDB: 63 results

1E6Q
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MYROSINASE FROM SINAPIS ALBA with the bound transition state analogue gluco-tetrazole
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-22
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High Resolution X-Ray Crystallography Shows that Ascorbate is a Cofactor for Myrosinase and Substitutes for the Function of the Catalytic Base
J.Biol.Chem., 275, 2000
1E73
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2-F-glucosylated MYROSINASE FROM SINAPIS ALBA with bound L-ascorbate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-fluoro-alpha-D-glucopyranose, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-23
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution X-Ray Crystallography Shows that Ascorbate is a Cofactor for Myrosinase and Substitutes for the Function of the Catalytic Base
J.Biol.Chem., 275, 2000
1E6X
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MYROSINASE FROM SINAPIS ALBA with a bound transition state analogue,D-glucono-1,5-lactone
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-glucono-1,5-lactone, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-23
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High Resolution X-Ray Crystallography Shows that Ascorbate is a Cofactor for Myrosinase and Substitutes for the Function of the Catalytic Base
J.Biol.Chem., 275, 2000
1DWG
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STUDY ON RADIATION DAMAGE ON A CRYOCOOLED CRYSTAL: PART 3 STRUCTURE AFTER IRRADIATION WITH 18.2*10E15 PHOTONS/MM2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Burmeister, W.P.
Deposit date:1999-12-05
Release date:2000-03-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Changes in a Cryo-Cooled Protein Crystal due to Radiation Damage
Acta Crystallogr.,Sect.D, 56, 2000
2J8X
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Epstein-Barr virus uracil-DNA glycosylase in complex with Ugi from PBS-2
Descriptor: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR, UREA
Authors:Geoui, T, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2006-10-31
Release date:2006-12-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New Insights on the Role of the Gamma-Herpesvirus Uracil-DNA Glycosylase Leucine Loop Revealed by the Structure of the Epstein-Barr Virus Enzyme in Complex with an Inhibitor Protein.
J.Mol.Biol., 366, 2007
2W45
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Epstein-Barr virus alkaline nuclease
Descriptor: ALKALINE EXONUCLEASE
Authors:Buisson, M, Geoui, T, Flot, D, Tarbouriech, N, Burmeister, W.P.
Deposit date:2008-11-21
Release date:2009-06-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Bridge Crosses the Active Site Canyon of the Epstein-Barr Virus Nuclease with DNase and Rnase Activity.
J.Mol.Biol., 391, 2009
2W4B
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Epstein-Barr virus alkaline nuclease D203S mutant
Descriptor: ALKALINE EXONUCLEASE
Authors:Buisson, M, Geoui, T, Flot, D, Tarbouriech, N, Burmeister, W.P.
Deposit date:2008-11-24
Release date:2009-06-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A Bridge Crosses the Active Site Canyon of the Epstein-Barr Virus Nuclease with DNase and Rnase Activity.
J.Mol.Biol., 391, 2009
6ZXP
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Solution structure of the C-terminal domain of the vaccinia virus DNA polymerase processivity factor component A20 fused to a short peptide from the viral DNA polymerase E9.
Descriptor: DNA polymerase processivity factor component A20,DNA polymerase processivity factor component E9
Authors:Bersch, B, Tarbouriech, N, Burmeister, W, Iseni, F.
Deposit date:2020-07-30
Release date:2021-05-19
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structure of the C-terminal Domain of A20, the Missing Brick for the Characterization of the Interface between Vaccinia Virus DNA Polymerase and its Processivity Factor.
J.Mol.Biol., 433, 2021
6ZYC
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Solution structure of the C-terminal domain of the vaccinia virus DNA polymerase processivity factor component A20.
Descriptor: DNA polymerase processivity factor component A20
Authors:Bersch, B, Iseni, F, Burmeister, W, Tarbouriech, N.
Deposit date:2020-07-31
Release date:2021-05-19
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structure of the C-terminal Domain of A20, the Missing Brick for the Characterization of the Interface between Vaccinia Virus DNA Polymerase and its Processivity Factor.
J.Mol.Biol., 433, 2021
5N2E
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Structure of the E9 DNA polymerase from vaccinia virus
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tarbouriech, N, Burmeister, W.P, Iseni, F.
Deposit date:2017-02-07
Release date:2017-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding.
Nat Commun, 8, 2017
8QAM
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vaccinia virus Uracil DNA glycosidase mutant I197K-V200E-L204K
Descriptor: GLYCEROL, SULFATE ION, Uracil-DNA glycosylase
Authors:Tarbouriech, N, Burmeister, W.P.
Deposit date:2023-08-23
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus.
Plos Pathog., 20, 2024
4YIG
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vaccinia virus D4/A20(1-50) in complex with dsDNA containing an abasic site and free uracyl
Descriptor: DNA (5'-D(*AP*AP*GP*AP*TP*AP*AP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*TP*(ORP)P*AP*TP*CP*TP*T)-3'), DNA polymerase processivity factor component A20, ...
Authors:tarbouriech, N, burmeister, W.P, iseni, F.
Deposit date:2015-03-02
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the Vaccinia Virus Uracil-DNA Glycosylase in Complex with DNA.
J.Biol.Chem., 290, 2015
5N2H
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Structure of the E9 DNA polymerase exonuclease deficient mutant (D166A+E168A) from vaccinia virus
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tarbouriech, N, Burmeister, W.P, Iseni, F.
Deposit date:2017-02-07
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding.
Nat Commun, 8, 2017
5N2G
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Structure of the E9 DNA polymerase from vaccinia virus in complex with manganese
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tarbouriech, N, Burmeister, W.P, Iseni, F.
Deposit date:2017-02-07
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding.
Nat Commun, 8, 2017
4YGM
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BU of 4ygm by Molmil
Vaccinia virus his-D4/A20(1-50) in complex with uracil
Descriptor: DNA polymerase processivity factor component A20, SULFATE ION, URACIL, ...
Authors:Tarbouriech, N, Iseni, F, Burmeister, W.P.
Deposit date:2015-02-26
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Vaccinia Virus Uracil-DNA Glycosylase in Complex with DNA.
J.Biol.Chem., 290, 2015
2CH8
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BU of 2ch8 by Molmil
Structure of the Epstein-Barr Virus Oncogene BARF1
Descriptor: 33 KDA EARLY PROTEIN, PLATINUM (II) ION, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Tarbouriech, N, Ruggiero, F, deTurenne-Tessier, M, Ooka, T, Burmeister, W.P.
Deposit date:2006-03-13
Release date:2006-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Epstein-Barr Virus Oncogene Barf1
J.Mol.Biol., 359, 2006
1EZJ
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CRYSTAL STRUCTURE OF THE MULTIMERIZATION DOMAIN OF THE PHOSPHOPROTEIN FROM SENDAI VIRUS
Descriptor: CALCIUM ION, ETHYL MERCURY ION, NUCLEOCAPSID PHOSPHOPROTEIN
Authors:Tarbouriech, N, Curran, J, Ruigrok, R.W.H, Burmeister, W.P.
Deposit date:2000-05-11
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tetrameric coiled coil domain of Sendai virus phosphoprotein.
Nat.Struct.Biol., 7, 2000
2WE2
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EBV dUTPase double mutant Gly78Asp-Asp131Ser with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, SULFATE ION
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
2WE3
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EBV dUTPase inactive mutant deleted of motif V
Descriptor: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, DEOXYURIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
2WE1
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EBV dUTPase mutant Asp131Asn with bound dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, SULFATE ION
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
3FRU
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NEONATAL FC RECEPTOR, PH 6.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-2-MICROGLOBULIN, BETA-MERCAPTOETHANOL, ...
Authors:Vaughn, D.E, Burmeister, W.P, Bjorkman, P.J.
Deposit date:1997-12-22
Release date:1998-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of pH-dependent antibody binding by the neonatal Fc receptor.
Structure, 6, 1998
1W9B
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S. alba myrosinase in complex with carba-glucotropaeolin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBA-GLUCOTROPAEOLIN, ...
Authors:Bourderioux, A, Lefoix, M, Gueyrard, D, Tatibouet, A, Cottaz, S, Arzt, S, Burmeister, W.P, Rollin, P.
Deposit date:2004-10-08
Release date:2005-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The glucosinolate-myrosinase system. New insights into enzyme-substrate interactions by use of simplified inhibitors.
Org. Biomol. Chem., 3, 2005
1W9D
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S. alba myrosinase in complex with S-ethyl phenylacetothiohydroximate- O-sulfate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Bourderioux, A, Lefoix, M, Gueyrard, D, Tatibouet, A, Cottaz, S, Arzt, S, Burmeister, W.P, Rollin, P.
Deposit date:2004-10-08
Release date:2005-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Glucosinolate-Myrosinase System. New Insights Into Enzyme-Substrate Interactions by Use of Simplified Inhibitors
Org.Biomol.Chem., 3, 2005
2WE0
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EBV dUTPase mutant Cys4Ser
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, MALATE LIKE INTERMEDIATE, ...
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
5JKT
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vaccinia virus D4 P173G mutant /A20(1-50)
Descriptor: ACETATE ION, DNA polymerase processivity factor component A20, SULFATE ION, ...
Authors:Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Peyrefitte, C.N, Iseni, F.
Deposit date:2016-04-26
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural analysis of point mutations at the Vaccinia virus A20/D4 interface.
Acta Crystallogr.,Sect.F, 72, 2016

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