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PDB: 61 件

4IBG
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BU of 4ibg by Molmil
Ebola virus VP35 bound to small molecule
分子名称: GLYCEROL, PHOSPHATE ION, Polymerase cofactor VP35, ...
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBB
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BU of 4ibb by Molmil
Ebola virus VP35 bound to small molecule
分子名称: Polymerase cofactor VP35, {4-[(5R)-3-hydroxy-2-oxo-4-(thiophen-2-ylcarbonyl)-5-(2,4,5-trimethylphenyl)-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-12-08
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBD
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BU of 4ibd by Molmil
Ebola virus VP35 bound to small molecule
分子名称: 5-[(2R)-3-benzoyl-2-(4-bromothiophen-2-yl)-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl]-2-methylbenzoic acid, GLYCEROL, MAGNESIUM ION, ...
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBJ
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BU of 4ibj by Molmil
Ebola virus VP35 bound to small molecule
分子名称: 3-{(5S)-3-hydroxy-2-oxo-4-[3-(trifluoromethyl)benzoyl]-5-[3-(trifluoromethyl)phenyl]-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid, Polymerase cofactor VP35
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBI
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BU of 4ibi by Molmil
Ebola virus VP35 bound to small molecule
分子名称: 3-{(2S)-2-(7-chloro-1,3-benzodioxol-5-yl)-4-hydroxy-5-oxo-3-[3-(trifluoromethyl)benzoyl]-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid, Polymerase cofactor VP35
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.473 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBE
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BU of 4ibe by Molmil
Ebola virus VP35 bound to small molecule
分子名称: 5-[(2R)-3-benzoyl-2-(4-bromothiophen-2-yl)-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl]-2-chlorobenzoic acid, GLYCEROL, Polymerase cofactor VP35
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBF
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BU of 4ibf by Molmil
Ebola virus VP35 bound to small molecule
分子名称: (4-{(2R)-2-(4-bromothiophen-2-yl)-3-[(5-chlorothiophen-2-yl)carbonyl]-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl}phenyl)acetic acid, Polymerase cofactor VP35
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.291 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBK
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BU of 4ibk by Molmil
Ebola virus VP35 bound to small molecule
分子名称: 3-{(2S)-2-(7-chloro-1,3-benzodioxol-5-yl)-3-[(5-chlorothiophen-2-yl)carbonyl]-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBC
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BU of 4ibc by Molmil
Ebola virus VP35 bound to small molecule
分子名称: DIMETHYL SULFOXIDE, Polymerase cofactor VP35, {4-[(2R)-3-(2-chlorobenzoyl)-2-(2-chlorophenyl)-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.745 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
6BDG
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BU of 6bdg by Molmil
HFQ monomer in spacegroup p6 at 1.93 angstrom resolution
分子名称: RNA-binding protein Hfq
著者Brown, C, Zhang, K, Seo, C, Ellis, M.J, Hanniford, D.B, Junop, M.
登録日2017-10-23
公開日2017-11-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.964 Å)
主引用文献HFQ monomer in spacegroup p6 at 1.93 angstrom resolution
To Be Published
6BD0
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BU of 6bd0 by Molmil
I-OnuI K227Y, D236A bound to cognate substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (25-MER), Ribosomal protein 3/homing endonuclease-like protein fusion
著者Brown, C, Zhang, K, Laforet, M, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献I-OnuI K227Y, D236A bound to cognate substrate (pre-cleavage complex)
To Be Published
6BCH
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BU of 6bch by Molmil
I-LtrI E29D bound to cognate substrate (nicked complex)
分子名称: DNA (26-MER), DNA (5'-D(*GP*GP*TP*CP*TP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*GP*GP*AP*GP*CP*AP*TP*TP*T)-3'), ...
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献I-LtrI E29D bound to cognate substrate (nicked complex)
To Be Published
6BDA
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BU of 6bda by Molmil
Wild-type I-OnuI bound to A3G substrate (post-cleavage complex)
分子名称: Cleaved Cognate DNA strand, +11 sense, Cleaved cognate DNA strand, ...
著者Brown, C, Zhang, K, Laforet, M, McMurrough, T, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-22
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Wild-type I-OnuI bound to A3G substrate (post-cleavage complex)
To Be Published
6BDB
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BU of 6bdb by Molmil
I-OnuI K227Y, D236A bound to A3G substrate (pre-cleavage complex)
分子名称: DNA (26-MER), Ribosomal protein 3/homing endonuclease-like protein fusion
著者Brown, C, Zhang, K, McMurrough, T.A, Laforet, M, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-22
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献I-OnuI K227Y, D236A bound to A3G substrate (pre-cleavage complex)
To Be Published
6BCG
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BU of 6bcg by Molmil
I-LtrI A28G bound to cognate substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCF
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BU of 6bcf by Molmil
I-LtrI G183A bound to cognate substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCT
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BU of 6bct by Molmil
I-LtrI E184D bound to non-cognate C4 substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (26-MER), DNA (27-MER), ...
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCN
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BU of 6bcn by Molmil
I-LtrI E184D bound to cognate substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCI
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BU of 6bci by Molmil
Wild-type I-LtrI bound to non-cognate C4 substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCE
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BU of 6bce by Molmil
Wild-type I-LtrI bound to cognate substrate (pre-cleavage complex)
分子名称: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
登録日2017-10-20
公開日2018-10-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
5EWP
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BU of 5ewp by Molmil
ARO (armadillo repeats only protein) from Plasmodium falciparum
分子名称: ARO (armadillo repeats only protein)
著者Brown, C, Zhang, K, Emery, J, Prusty, D, Wetzel, J, Heincke, D, Gilberger, T, Junop, M.
登録日2015-11-20
公開日2016-01-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ARO (armadillo repeats only protein) from Plasmodium falciparum
To Be Published
7BJV
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BU of 7bjv by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI09181
分子名称: DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ...
著者Browning, C, McEwen, A.G, Billas, I.M.L.
登録日2021-01-14
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
7BJU
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BU of 7bju by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI08346
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, ...
著者Browning, C, McEwen, A.G, Billas, I.M.L.
登録日2021-01-14
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
4RU4
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BU of 4ru4 by Molmil
Crystal structure of the tailspike protein gp49 from Pseudomonas phage LKA1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
4RU5
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BU of 4ru5 by Molmil
Crystal Structure of the Pseudomonas phage phi297 tailspike gp61
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Browning, C, Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017

 

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