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PDB: 413 results

3BOR
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Crystal structure of the DEADc domain of human translation initiation factor 4A-2
Descriptor: Human initiation factor 4A-II
Authors:Dimov, S, Hong, B, Tempel, W, MacKenzie, F, Karlberg, T, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-12-17
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
1X9W
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BU of 1x9w by Molmil
T7 DNA polymerase in complex with a primer/template DNA containing a disordered N-2 aminofluorene on the template, crystallized with dideoxy-ATP as the incoming nucleotide.
Descriptor: 5'-D(*CP*CP*CP*(AFG)*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*T*GP*GP*T*AP*GP*TP*GP*TP*GP*AP*(2DT))-3', DNA polymerase, ...
Authors:Dutta, S, Li, Y, Johnson, D, Dzantiev, L, Richardson, C.C, Romano, L.J, Ellenberger, T.
Deposit date:2004-08-24
Release date:2004-10-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.Usa, 101, 2004
2CBR
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CELLULAR RETINOIC ACID BINDING PROTEIN I IN COMPLEX WITH A RETINOBENZOIC ACID (AM80)
Descriptor: 4-[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbamoyl]benzoic acid, PROTEIN (CRABP-I)
Authors:Chaudhuri, B, Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1999-02-22
Release date:1999-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of cellular retinoic acid binding proteins I and II in complex with synthetic retinoids.
Acta Crystallogr.,Sect.D, 55, 1999
2H1W
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BU of 2h1w by Molmil
Crystal structure of the His183Ala mutant variant of Bacillus subtilis ferrochelatase
Descriptor: FE (II) ION, Ferrochelatase, MAGNESIUM ION
Authors:Hansson, M.D, Karlberg, T, Arys Rahardja, M, Al-Karadaghi, S, Hansson, M.
Deposit date:2006-05-17
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Amino Acid Residues His183 and Glu264 in Bacillus subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin IX
Biochemistry, 46, 2007
2H1V
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Crystal structure of the Lys87Ala mutant variant of Bacillus subtilis ferrochelatase
Descriptor: Ferrochelatase, MAGNESIUM ION
Authors:Hansson, M.D, Karlberg, T, Arys Rahardja, M, Al-Karadaghi, S, Hansson, M.
Deposit date:2006-05-17
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Amino Acid Residues His183 and Glu264 in Bacillus subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin IX
Biochemistry, 46, 2007
2HII
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heterotrimeric PCNA sliding clamp
Descriptor: PCNA1 (SSO0397), PCNA2 (SSO1047), PCNA3 (SSO0405)
Authors:Pascal, J.M, Tsodikov, O.V, Ellenberger, T.
Deposit date:2006-06-29
Release date:2006-11-07
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
2HIK
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heterotrimeric PCNA sliding clamp
Descriptor: PCNA1 (SSO0397), PCNA2 (SSO1047), PCNA3 (SSO0405)
Authors:Pascal, J.M, Tsodikov, O.V, Ellenberger, T.
Deposit date:2006-06-29
Release date:2006-11-07
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
2HK6
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Crystal Structure of B. subtilis ferrochelatase with Iron bound at the active site
Descriptor: FE (III) ION, Ferrochelatase, MAGNESIUM ION
Authors:Al-Karadaghi, S, Karlberg, T.
Deposit date:2006-07-03
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Amino Acid Residues His183 and Glu264 in Bacillus subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin IX
Biochemistry, 46, 2007
2IZ4
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BU of 2iz4 by Molmil
Solution structure of porcine beta-microseminoprotein
Descriptor: BETA-MICROSEMINOPROTEIN
Authors:Ghasriani, H, Teilum, K, Johnsson, Y, Fernlund, P, Drakenberg, T.
Deposit date:2006-07-24
Release date:2006-10-24
Last modified:2020-01-15
Method:SOLUTION NMR
Cite:Solution Structure of Human and Porcine Beta-Microseminoprotein
J.Mol.Biol., 362, 2006
2IZ3
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Solution structure of human beta-microseminoprotein
Descriptor: BETA-MICROSEMINOPROTEIN
Authors:Ghasriani, H, Teilum, K, Johnsson, Y, Fernlund, P, Drakenberg, T.
Deposit date:2006-07-24
Release date:2006-10-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of Human and Porcine Beta-Microseminoprotein
J.Mol.Biol., 362, 2006
2HIV
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ATP-dependent DNA ligase from S. solfataricus
Descriptor: Thermostable DNA ligase
Authors:Pascal, J.M, Ellenberger, T.
Deposit date:2006-06-29
Release date:2006-11-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
2HIX
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ATP dependent DNA ligase from S. solfataricus bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Thermostable DNA ligase
Authors:Pascal, J.M, Ellenberger, T.
Deposit date:2006-06-29
Release date:2006-11-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
2BOD
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BU of 2bod by Molmil
Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside
Descriptor: ENDOGLUCANASE E-2, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-methyl beta-D-glucopyranoside
Authors:Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
Deposit date:2005-04-10
Release date:2005-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
2BOG
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Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside
Descriptor: ENDOGLUCANASE E-2, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-methyl beta-D-glucopyranoside
Authors:Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
Deposit date:2005-04-10
Release date:2005-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
2BOE
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BU of 2boe by Molmil
Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca
Descriptor: ENDOGLUCANASE E-2
Authors:Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
Deposit date:2005-04-10
Release date:2005-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
2BOF
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BU of 2bof by Molmil
Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose
Descriptor: ENDOGLUCANASE E-2, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
Deposit date:2005-04-10
Release date:2005-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
3UEK
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BU of 3uek by Molmil
Crystal structure of the catalytic domain of rat poly (ADP-ribose) glycohydrolase
Descriptor: Poly(ADP-ribose) glycohydrolase
Authors:Kim, I.K, Kiefer, J.R, Stegemann, R.A, Classen, S, Tainer, J.A, Ellenberger, T.
Deposit date:2011-10-30
Release date:2012-05-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of mammalian poly(ADP-ribose) glycohydrolase reveals a flexible tyrosine clasp as a substrate-binding element.
Nat.Struct.Mol.Biol., 19, 2012
3UEL
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BU of 3uel by Molmil
Crystal structure of the catalytic domain of rat poly (ADP-ribose) glycohydrolase bound to ADP-HPD
Descriptor: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, Poly(ADP-ribose) glycohydrolase
Authors:Kim, I.K, Kiefer, J.R, Stegemann, R.A, Classen, S, Tainer, J.A, Ellenberger, T.
Deposit date:2011-10-30
Release date:2012-05-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of mammalian poly(ADP-ribose) glycohydrolase reveals a flexible tyrosine clasp as a substrate-binding element.
Nat.Struct.Mol.Biol., 19, 2012
2AJQ
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BU of 2ajq by Molmil
Structure of replicative DNA polymerase provides insigts into the mechanisms for processivity, frameshifting and editing
Descriptor: DNA Primer, DNA Template, T7 DNA polymerase, ...
Authors:Brieba, L, Ellenberger, T.
Deposit date:2005-08-02
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of replicative DNA polymerase provides insigts into the mechanisms for processivity, frameshifting and editing
To be Published
2A1I
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BU of 2a1i by Molmil
Crystal Structure of the Central Domain of Human ERCC1
Descriptor: DNA excision repair protein ERCC-1, MERCURY (II) ION
Authors:Tsodikov, O.V, Enzlin, J.H, Scharer, O.D, Ellenberger, T.
Deposit date:2005-06-20
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and DNA binding functions of ERCC1, a subunit of the DNA structure-specific endonuclease XPF-ERCC1.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AC4
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BU of 2ac4 by Molmil
Crystal structure of the His183Cys mutant variant of Bacillus subtilis Ferrochelatase
Descriptor: Ferrochelatase
Authors:Shipovskov, S, Karlberg, T, Fodje, M, Hansson, M.D, Ferreira, G.C, Hansson, M, Reimann, C.T, Al-Karadaghi, S.
Deposit date:2005-07-18
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Metallation of the Transition-state Inhibitor N-methyl Mesoporphyrin by Ferrochelatase: Implications for the Catalytic Reaction Mechanism.
J.Mol.Biol., 352, 2005
2B4J
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BU of 2b4j by Molmil
Structural basis for the recognition between HIV-1 integrase and LEDGF/p75
Descriptor: GLYCEROL, Integrase (IN), PC4 and SFRS1 interacting protein, ...
Authors:Cherepanov, P, Ambrosio, A.L, Rahman, S, Ellenberger, T, Engelman, A.
Deposit date:2005-09-24
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75
Proc.Natl.Acad.Sci.Usa, 102, 2005
2B2C
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Cloning, expression, characterisation and three- dimensional structure determination of the Caenorhabditis elegans spermidine synthase
Descriptor: spermidine synthase
Authors:Dufe, V.T, Luersen, K, Eschbach, M.L, Haider, N, Karlberg, T, Walter, R.D, Al-Karadaghi, S.
Deposit date:2005-09-19
Release date:2005-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cloning, expression, characterisation and three-dimensional structure determination of Caenorhabditis elegans spermidine synthase
FEBS LETT., 579, 2005
2Z38
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Crystal structure of chloride bound Brassica juncea chitinase catalytic module (Bjchi3)
Descriptor: CHLORIDE ION, Chitinase
Authors:Ubhayasekera, W, Bergfors, T, Mowbray, S.L.
Deposit date:2007-06-02
Release date:2007-06-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of a family 19 chitinase from Brassica juncea show flexibility of binding cleft loops
Febs J., 274, 2007
2A5V
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Crystal structure of M. tuberculosis beta carbonic anhydrase, Rv3588c, tetrameric form
Descriptor: CARBONIC ANHYDRASE (CARBONATE DEHYDRATASE) (CARBONIC DEHYDRATASE), THIOCYANATE ION, ZINC ION
Authors:Covarrubias, A.S, Bergfors, T, Jones, T.A, Hogbom, M.
Deposit date:2005-07-01
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Mechanics of the pH-dependent Activity of beta-Carbonic Anhydrase from Mycobacterium tuberculosis
J.Biol.Chem., 281, 2006

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數據於2024-07-31公開中

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