Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 413 件

3ZHX
DownloadVisualize
BU of 3zhx by Molmil
Structure of Mycobacterium tuberculosis DXR in complex with a fosmidomycin analogue
分子名称: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, MANGANESE (II) ION, [(1S)-1-(3,4-dichlorophenyl)-3-[oxidanyl(phenylcarbonyl)amino]propyl]phosphonic acid
著者Bjorkelid, C, Jansson, A.M, Bergfors, T, Unge, T, Mowbray, S.L, Jones, T.A.
登録日2012-12-30
公開日2013-10-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dxr Inhibition by Potent Mono- and Disubstituted Fosmidomycin Analogues.
J.Med.Chem., 56, 2013
3ZI0
DownloadVisualize
BU of 3zi0 by Molmil
Structure of Mycobacterium tuberculosis DXR in complex with a fosmidomycin analogue
分子名称: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, MANGANESE (II) ION, [(1S)-1-(3,4-dichlorophenyl)-3-{hydroxy[2-(1H-1,2,4-triazol-1-ylmethyl)benzoyl]amino}propyl]phosphonic acid
著者Bjorkelid, C, Jansson, A.M, Bergfors, T, Unge, T, Mowbray, S.L, Jones, T.A.
登録日2012-12-30
公開日2013-10-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Dxr Inhibition by Potent Mono- and Disubstituted Fosmidomycin Analogues.
J.Med.Chem., 56, 2013
3ZHZ
DownloadVisualize
BU of 3zhz by Molmil
Structure of Mycobacterium tuberculosis DXR in complex with a fosmidomycin analogue
分子名称: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, [(1S)-1-(3,4-dichlorophenyl)-3-[oxidanyl-[2-[[3-(trifluoromethyl)phenyl]amino]phenyl]carbonyl-amino]propyl]phosphonic acid
著者Bjorkelid, C, Jansson, A.M, Bergfors, T, Unge, T, Mowbray, S.L, Jones, T.A.
登録日2012-12-30
公開日2013-10-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Dxr Inhibition by Potent Mono- and Disubstituted Fosmidomycin Analogues.
J.Med.Chem., 56, 2013
5EWP
DownloadVisualize
BU of 5ewp by Molmil
ARO (armadillo repeats only protein) from Plasmodium falciparum
分子名称: ARO (armadillo repeats only protein)
著者Brown, C, Zhang, K, Emery, J, Prusty, D, Wetzel, J, Heincke, D, Gilberger, T, Junop, M.
登録日2015-11-20
公開日2016-01-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ARO (armadillo repeats only protein) from Plasmodium falciparum
To Be Published
5FR3
DownloadVisualize
BU of 5fr3 by Molmil
X-ray crystal structure of aggregation-resistant protective antigen of Bacillus anthracis (mutant S559L T576E)
分子名称: CALCIUM ION, GLYCEROL, PROTECTIVE ANTIGEN
著者Ganesan, A, Siekierska, A, Beerten, J, Brams, M, van Durme, J, De Baets, G, van der Kant, R, Gallardo, R, Ramakers, M, Langenberg, T, Wilkinson, H, De Smet, F, Ulens, C, Rousseau, F, Schymkowitz, J.
登録日2015-12-15
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.935 Å)
主引用文献Structural Hot Spots for the Solubility of Globular Proteins
Nat.Commun., 7, 2016
5EHB
DownloadVisualize
BU of 5ehb by Molmil
A de novo designed hexameric coiled-coil peptide with iodotyrosine
分子名称: pHiosYI
著者Lizatovic, R, Aurelius, O, Stenstrom, O, Drakenberg, T, Akke, M, Logan, D.T, Andre, I.
登録日2015-10-28
公開日2016-06-15
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch.
Structure, 24, 2016
7A8P
DownloadVisualize
BU of 7a8p by Molmil
Structure of human mitochondrial RNA polymerase in complex with IMT inhibitor.
分子名称: (3~{R})-1-[(2~{R})-2-[4-(2-chloranyl-4-fluoranyl-phenyl)-2-oxidanylidene-chromen-7-yl]oxypropanoyl]piperidine-3-carboxylic acid, DNA-directed RNA polymerase, mitochondrial
著者Hillen, H.S, Bonekamp, N, Peter, B, Felser, A, Bergbrede, T, Choidas, A, Horn, M, Unger, A, di Lucrezia, R, Atanassov, I, Li, X, Koch, U, Menninger, S, Boros, J, Habenberger, P, Giavalisco, P, Cramer, P, Denzel, M, Nussbaumer, P, Klebl, B, Falkenberg, M, Gustafsson, C.M, Larsson, N.G.
登録日2020-08-30
公開日2020-12-30
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Small-molecule inhibitors of human mitochondrial DNA transcription.
Nature, 588, 2020
1Z19
DownloadVisualize
BU of 1z19 by Molmil
Crystal structure of a lambda integrase(75-356) dimer bound to a COC' core site
分子名称: 33-MER, 5'-D(*CP*TP*CP*GP*TP*TP*CP*AP*GP*CP*TP*TP*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*AP*TP*AP*CP*TP*AP*AP*GP*TP*TP*GP*GP*CP*AP*TP*TP*A)-3', ...
著者Biswas, T, Aihara, H, Radman-Livaja, M, Filman, D, Landy, A, Ellenberger, T.
登録日2005-03-03
公開日2005-06-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A structural basis for allosteric control of DNA recombination by lambda integrase.
Nature, 435, 2005
2ONT
DownloadVisualize
BU of 2ont by Molmil
A swapped dimer of the HIV-1 capsid C-terminal domain
分子名称: Capsid protein p24
著者Ivanov, D, Tsodikov, O.V, Kasanov, J, Ellenberger, T, Wagner, G, Collins, T.
登録日2007-01-24
公開日2007-02-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Domain-swapped dimerization of the HIV-1 capsid C-terminal domain
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PTL
DownloadVisualize
BU of 2ptl by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF AN IMMUNOGLOBULIN LIGHT CHAIN-BINDING DOMAIN OF PROTEIN L. COMPARISON WITH THE IGG-BINDING DOMAINS OF PROTEIN G
分子名称: PROTEIN L
著者Wikstroem, M, Drakenberg, T, Forsen, S, Sjoebring, U, Bjoerck, L.
登録日1994-08-12
公開日1994-10-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of an immunoglobulin light chain-binding domain of protein L. Comparison with the IgG-binding domains of protein G.
Biochemistry, 33, 1994
6I8R
DownloadVisualize
BU of 6i8r by Molmil
Crystal structure of an ancient sequence-reconstructed Elongation factor Tu (node 170)
分子名称: Elongation Factor Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Majumdar, S, Bergfors, T, Sanyal, S.
登録日2018-11-20
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an ancient sequence-reconstructed Elongation factor Tu (node 170)
To be published
1WHF
DownloadVisualize
BU of 1whf by Molmil
COAGULATION FACTOR, NMR, 15 STRUCTURES
分子名称: COAGULATION FACTOR X
著者Sunnerhagen, M, Olah, G.A, Stenflo, J, Forsen, S, Drakenberg, T, Trewhella, J.
登録日1996-06-18
公開日1997-05-15
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献The relative orientation of Gla and EGF domains in coagulation factor X is altered by Ca2+ binding to the first EGF domain. A combined NMR-small angle X-ray scattering study.
Biochemistry, 35, 1996
3U9U
DownloadVisualize
BU of 3u9u by Molmil
Crystal Structure of Extracellular Domain of Human ErbB4/Her4 in complex with the Fab fragment of mAb1479
分子名称: Fab Heavy Chain, Fab Light Chain, Receptor tyrosine-protein kinase erbB-4
著者Hollmen, M, Liu, P, Wildiers, H, Reinvall, I, Vandorpe, T, Smeets, A, Deraedt, K, Vahlberg, T, Joensuu, H, Leahy, D.J, Schoffski, P, Elenius, K.
登録日2011-10-19
公開日2012-10-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Proteolytic processing of ErbB4 in breast cancer.
Plos One, 7, 2012
6HTW
DownloadVisualize
BU of 6htw by Molmil
Crystal structure of an ancient sequence-reconstructed Elongation factor Tu (node 184)
分子名称: Elongation Factor Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Majumdar, S, Bergfors, T, Sanyal, S.
登録日2018-10-04
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of an ancient sequence-reconstructed Elongation factor Tu (node 184)
To be published
1WHE
DownloadVisualize
BU of 1whe by Molmil
COAGULATION FACTOR, NMR, 20 STRUCTURES
分子名称: COAGULATION FACTOR X
著者Sunnerhagen, M, Olah, G.A, Stenflo, J, Forsen, S, Drakenberg, T, Trewhella, J.
登録日1996-06-18
公開日1997-05-15
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献The relative orientation of Gla and EGF domains in coagulation factor X is altered by Ca2+ binding to the first EGF domain. A combined NMR-small angle X-ray scattering study.
Biochemistry, 35, 1996
1NYA
DownloadVisualize
BU of 1nya by Molmil
NMR SOLUTION STRUCTURE OF CALERYTHRIN, AN EF-HAND CALCIUM-BINDING PROTEIN
分子名称: CALCIUM ION, Calerythrin
著者Tossavainen, H, Permi, P, Annila, A, Kilpelainen, I, Drakenberg, T.
登録日2003-02-12
公開日2003-08-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR solution structure of calerythrin, an EF-hand calcium-binding protein from Saccharopolyspora erythraea
Eur.J.Biochem., 270, 2003
2Z37
DownloadVisualize
BU of 2z37 by Molmil
Crystal structure of Brassica juncea chitinase catalytic module (Bjchi3)
分子名称: Chitinase
著者Ubhayasekera, W, Berglund, G, Bergfors, T, Mowbray, S.L.
登録日2007-06-02
公開日2007-06-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Crystal structures of a family 19 chitinase from Brassica juncea show flexibility of binding cleft loops
Febs J., 274, 2007
2Y1F
DownloadVisualize
BU of 2y1f by Molmil
X-ray structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXR, Rv2870c, from Mycobacterium tuberculosis, in complex with a 3,4- dichlorophenyl-substituted fosmidomycin analogue, manganese and NADPH.
分子名称: (1S)-1-(3,4-DICHLOROPHENYL)-3-[FORMYL(HYDROXY)AMINO]PROPYL}PHOSPHONIC ACID, 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, MANGANESE (II) ION, ...
著者Henriksson, L.M, Larsson, A.M.S, Bergfors, T, Bjorkelid, C, Unge, T, Mowbray, S.L, Jones, T.A.
登録日2010-12-08
公開日2011-06-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Design, Synthesis and X-Ray Crystallographic Studies of Alpha-Aryl Substituted Fosmidomycin Analogues as Inhibitors of Mycobacterium Tuberculosis 1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase
J.Med.Chem, 54, 2011
7B4T
DownloadVisualize
BU of 7b4t by Molmil
Broadly neutralizing DARPin bnD.1 in complex with the HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505)
分子名称: Broadly neutralizing DARPin bnD.1, HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505), SULFATE ION
著者Friedrich, N, Stiegeler, E, Glogl, M, Lemmin, T, Hansen, S, Kadelka, C, Wu, Y, Ernst, P, Maliqi, L, Foulkes, C, Morin, M, Eroglu, M, Liechti, T, Ivan, B, Reinberg, T, Schaefer, J, Karakus, U, Ursprung, S, Mann, A, Rusert, P, Kouyos, R.D, Robinson, J.A, Gunthard, H.F, Pluckthun, A, Trkola, A.
登録日2020-12-02
公開日2021-11-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization.
Nat Commun, 12, 2021
7B4U
DownloadVisualize
BU of 7b4u by Molmil
Broadly neutralizing DARPin bnD.2 in complex with the HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505)
分子名称: Broadly neutralizing DARPin bnD.2, CALCIUM ION, HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505)
著者Friedrich, N, Stiegeler, E, Glogl, M, Lemmin, T, Hansen, S, Kadelka, C, Wu, Y, Ernst, P, Maliqi, L, Foulkes, C, Morin, M, Eroglu, M, Liechti, T, Ivan, B, Reinberg, T, Schaefer, J, Karakus, U, Ursprung, S, Mann, A, Rusert, P, Kouyos, R.D, Robinson, J.A, Gunthard, H.F, Pluckthun, A, Trkola, A.
登録日2020-12-02
公開日2021-11-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization.
Nat Commun, 12, 2021
7B4V
DownloadVisualize
BU of 7b4v by Molmil
Broadly neutralizing DARPin bnD.2 in complex with the HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505)
分子名称: Broadly neutralizing DARPin bnD.2, CHLORIDE ION, HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505), ...
著者Friedrich, N, Stiegeler, E, Glogl, M, Lemmin, T, Hansen, S, Kadelka, C, Wu, Y, Ernst, P, Maliqi, L, Foulkes, C, Morin, M, Eroglu, M, Liechti, T, Ivan, B, Reinberg, T, Schaefer, J, Karakus, U, Ursprung, S, Mann, A, Rusert, P, Kouyos, R.D, Robinson, J.A, Gunthard, H.F, Pluckthun, A, Trkola, A.
登録日2020-12-02
公開日2021-11-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization.
Nat Commun, 12, 2021
7B4W
DownloadVisualize
BU of 7b4w by Molmil
Broadly neutralizing DARPin bnD.3 in complex with the HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Broadly neutralizing DARPin bnD.3, ...
著者Friedrich, N, Stiegeler, E, Glogl, M, Lemmin, T, Hansen, S, Kadelka, C, Wu, Y, Ernst, P, Maliqi, L, Foulkes, C, Morin, M, Eroglu, M, Liechti, T, Ivan, B, Reinberg, T, Schaefer, J, Karakus, U, Ursprung, S, Mann, A, Rusert, P, Kouyos, R.D, Robinson, J.A, Gunthard, H.F, Pluckthun, A, Trkola, A.
登録日2020-12-02
公開日2021-11-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization.
Nat Commun, 12, 2021
1CMF
DownloadVisualize
BU of 1cmf by Molmil
NMR SOLUTION STRUCTURE OF APO CALMODULIN CARBOXY-TERMINAL DOMAIN
分子名称: CALMODULIN (VERTEBRATE)
著者Finn, B.E, Evenas, J, Drakenberg, T, Waltho, J.P, Thulin, E, Forsen, S.
登録日1995-07-19
公開日1995-12-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Calcium-induced structural changes and domain autonomy in calmodulin.
Nat.Struct.Biol., 2, 1995
1CMG
DownloadVisualize
BU of 1cmg by Molmil
NMR SOLUTION STRUCTURE OF CALCIUM-LOADED CALMODULIN CARBOXY-TERMINAL DOMAIN
分子名称: CALMODULIN (VERTEBRATE)
著者Evenas, J, Finn, B.E, Drakenberg, T, Waltho, J.P, Thulin, E, Forsen, S.
登録日1995-07-19
公開日1995-12-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Calcium-induced structural changes and domain autonomy in calmodulin.
Nat.Struct.Biol., 2, 1995
2CKR
DownloadVisualize
BU of 2ckr by Molmil
X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THERMOBIFIDA FUSCA ENDOGLUCANASE CEL5A (E5) E355Q IN COMPLEX WITH CELLOTETRAOSE
分子名称: BENZAMIDINE, ENDOGLUCANASE E-5, SODIUM ION, ...
著者Berglund, G.I, Gualfetti, P.J, Requadt, C, Gross, L.S, Bergfors, T, Shaw, A, Saldajeno, M, Mitchinson, C, Sandgren, M.
登録日2006-04-21
公開日2007-05-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The Crystal Structure of the Catalytic Domain of Thermobifida Fusca Endoglucanase Cel5A in Complex with Cellotetraose
To be Published

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon