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PDB: 500 results

6FRN
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BU of 6frn by Molmil
Structure of F420H2 oxidase (FprA) co-crystallized with 10mM Tb-Xo4 and calcium chloride
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CALCIUM ION, F420H2 oxidase (FprA), ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Wagner, T, Shima, S, Girard, E, Dumont, E, Maury, O.
Deposit date:2018-02-16
Release date:2018-10-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
6FRM
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BU of 6frm by Molmil
Crystal Structure of coenzyme F420H2 oxidase (FprA) co-crystallized with 10 mM Tb-Xo4
Descriptor: CHLORIDE ION, Coenzyme F420H2 oxidase (FprA), FE (III) ION, ...
Authors:Engilberge, S, Riobe, F, Wagner, T, Di Pietro, S, Shima, S, Girard, E, Dumont, E, Maury, O.
Deposit date:2018-02-16
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
4U0V
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BU of 4u0v by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with glucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, HTH-type transcriptional repressor YvoA
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4U0W
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BU of 4u0w by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLYCEROL, ...
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
6DD8
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BU of 6dd8 by Molmil
Structure of mouse SYCP3, P21 form
Descriptor: Synaptonemal complex protein 3
Authors:Rosenberg, S.C, Munoz, I.C, Uson, I, Corbett, K.D.
Deposit date:2018-05-09
Release date:2018-08-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A conserved filamentous assembly underlies the structure of the meiotic chromosome axis.
Elife, 8, 2019
6DD9
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BU of 6dd9 by Molmil
Structure of mouse SYCP3, P1 form
Descriptor: Synaptonemal complex protein 3
Authors:Rosenberg, S.C, Munoz, I.C, Uson, I, Corbett, K.D.
Deposit date:2018-05-09
Release date:2018-08-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A conserved filamentous assembly underlies the structure of the meiotic chromosome axis.
Elife, 8, 2019
7OOR
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BU of 7oor by Molmil
NaK C-DI mutant with Na+ and K+
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-05-28
Release date:2022-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
7OPH
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BU of 7oph by Molmil
NaK S-DI mutant with Na+ and K+
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-05-31
Release date:2022-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
7OOU
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BU of 7oou by Molmil
NaK C-DI mutant with Li+ and K+
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-05-28
Release date:2022-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
7OQ1
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BU of 7oq1 by Molmil
NaK S-ELM mutant with Na+ and K+
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-06-02
Release date:2022-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
7OQ2
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BU of 7oq2 by Molmil
NaK S-DI mutant soaked in Na+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-06-02
Release date:2022-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
7NDL
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BU of 7ndl by Molmil
Crystal structure of human GFAT-1 S205D
Descriptor: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Isoform 2 of Glutamine-fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Ruegenberg, S, Baumann, U, Denzel, M.S.
Deposit date:2021-02-02
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.223 Å)
Cite:Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
Nat Commun, 12, 2021
6ZLF
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BU of 6zlf by Molmil
Aerobic crystal structure of F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution under 125 bars of krypton
Descriptor: CHLORIDE ION, Coenzyme F420H2 oxidase (FprA), FLAVIN MONONUCLEOTIDE, ...
Authors:Engilberge, S, Wagner, T, Carpentier, P, Girard, E, Shima, S.
Deposit date:2020-06-30
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Krypton-derivatization highlights O 2 -channeling in a four-electron reducing oxidase.
Chem.Commun.(Camb.), 56, 2020
6ZK8
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BU of 6zk8 by Molmil
Native crystal structure of anaerobic F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution
Descriptor: Coenzyme F420H2 oxidase (FprA), DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Engilberge, S, Wagner, T, Carpentier, P, Girard, E, Shima, S.
Deposit date:2020-06-30
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Krypton-derivatization highlights O 2 -channeling in a four-electron reducing oxidase.
Chem.Commun.(Camb.), 56, 2020
7PA0
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BU of 7pa0 by Molmil
NaK C-DI F92A mutant with Rb+ and K+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-07-28
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
4ZSB
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BU of 4zsb by Molmil
Crystal structure of the ligand-free effector-binding domain of DasR (DasR-EBD)
Descriptor: HTH-type transcriptional repressor DasR
Authors:Fillenberg, S.B, Grau, F.C, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
4ZS8
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BU of 4zs8 by Molmil
Crystal structure of ligand-free, full length DasR
Descriptor: 1,2-ETHANEDIOL, HTH-type transcriptional repressor DasR
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
4ZSK
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BU of 4zsk by Molmil
Crystal structure of the effector-binding domain of DasR (DasR-EBD) in complex with N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
6HF6
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BU of 6hf6 by Molmil
Crystal structure of the Protease 1 (E29A,E60A,E80A) from Pyrococcus horikoshii co-crystallized with Tb-Xo4.
Descriptor: Deglycase PH1704, MALONATE ION, TERBIUM(III) ION, ...
Authors:Engilberge, S, Wagner, T, Santoni, G, Breyton, C, Shima, S, Franzetti, B, Riobe, F, Maury, O, Girard, E.
Deposit date:2018-08-21
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein crystal structure determination with the crystallophore, a nucleating and phasing agent.
J.Appl.Crystallogr., 52, 2019
6HF7
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BU of 6hf7 by Molmil
Crystal structure of the adenylate kinase from Methanothermococcus thermolithotrophicus co-crystallized with Tb-Xo4
Descriptor: Adenylate kinase, GLYCEROL, MAGNESIUM ION, ...
Authors:Engilberge, S, Wagner, T, Santoni, G, Breyton, C, Shima, S, Franzetti, B, Riobe, F, Maury, O, Girard, E.
Deposit date:2018-08-21
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Protein crystal structure determination with the crystallophore, a nucleating and phasing agent.
J.Appl.Crystallogr., 52, 2019
5MF2
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BU of 5mf2 by Molmil
Bacteriophage T5 distal tail protein pb9 co-crystallized with Tb-Xo4
Descriptor: CHLORIDE ION, Distal tail protein, TERBIUM(III) ION, ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Lassalle, L, Arnaud, C.-A, Breyton, C, Madern, D, Coquelle, N, Maury, O, Girard, E.
Deposit date:2016-11-17
Release date:2017-09-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallophore: a versatile lanthanide complex for protein crystallography combining nucleating effects, phasing properties, and luminescence.
Chem Sci, 8, 2017
8A2V
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BU of 8a2v by Molmil
Room temperature structure of the ground state of AtPhot2LOV2 in space group P43212
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Engilberge, S, Caramello, N, Royant, A.
Deposit date:2022-06-06
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Slow protein dynamics probed by time-resolved oscillation crystallography at room temperature.
Iucrj, 9, 2022
8A4E
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BU of 8a4e by Molmil
Room temperature structure of AtPhot2LOV2 in a photostationary equilibrium
Descriptor: 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE, FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Engilberge, S, Caramello, N, Royant, A.
Deposit date:2022-06-10
Release date:2023-03-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Slow protein dynamics probed by time-resolved oscillation crystallography at room temperature.
Iucrj, 9, 2022
8A2W
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BU of 8a2w by Molmil
Room temperature structure of the ground state of AtPhot2LOV2 in space group P212121, as recovered 1620 seconds after light irradiation
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Engilberge, S, Caramello, N, Royant, A.
Deposit date:2022-06-06
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Slow protein dynamics probed by time-resolved oscillation crystallography at room temperature.
Iucrj, 9, 2022
8AYQ
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BU of 8ayq by Molmil
NaK C-DI mutant with Rb+ and Ca2+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2022-09-02
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Mechanism of Calcium Permeation in a Glutamate Receptor Ion Channel.
J.Chem.Inf.Model., 63, 2023

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