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PDB: 567 results

4XUZ
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BU of 4xuz by Molmil
Structure of CTX-M-15 bound to RPX-7009 at 1.5 A
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Clifton, M.C, Gardberg, A.
Deposit date:2015-01-26
Release date:2015-04-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of a Cyclic Boronic Acid beta-Lactamase Inhibitor (RPX7009) with Utility vs Class A Serine Carbapenemases.
J.Med.Chem., 58, 2015
3G8A
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BU of 3g8a by Molmil
T. thermophilus 16S rRNA G527 methyltransferase in complex with AdoHcy in space group P61
Descriptor: Ribosomal RNA small subunit methyltransferase G, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Demirci, H, Gregory, S.T, Belardinelli, R, Gualerzi, C, Dahlberg, A.E, Jogl, G.
Deposit date:2009-02-11
Release date:2009-06-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional studies of the Thermus thermophilus 16S rRNA methyltransferase RsmG
Rna, 15, 2009
3DMH
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BU of 3dmh by Molmil
T. Thermophilus 16S rRNA N2 G1207 methyltransferase (RsmC) in complex with AdoMet and Guanosine
Descriptor: GUANOSINE, Probable ribosomal RNA small subunit methyltransferase, S-ADENOSYLMETHIONINE, ...
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-07-01
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of the Thermus thermophilus 16 S rRNA Methyltransferase RsmC in Complex with Cofactor and Substrate Guanosine.
J.Biol.Chem., 283, 2008
6CK4
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BU of 6ck4 by Molmil
G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5',3'-TETRAPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Reiss, C.W, Knappenberger, A.J, Strobel, S.A.
Deposit date:2018-02-27
Release date:2018-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.097 Å)
Cite:Structures of two aptamers with differing ligand specificity reveal ruggedness in the functional landscape of RNA.
Elife, 7, 2018
3D3D
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BU of 3d3d by Molmil
Bacteriophage lambda lysozyme complexed with a chitohexasaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme, SULFATE ION
Authors:Leung, A.K.W, Berghuis, A.M.
Deposit date:2008-05-09
Release date:2008-09-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the lytic transglycosylase from bacteriophage lambda in complex with hexa-N-acetylchitohexaose
Biochemistry, 40, 2001
3G88
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BU of 3g88 by Molmil
T. thermophilus 16S rRNA G527 methyltransferase in complex with AdoMet in space group P61
Descriptor: DI(HYDROXYETHYL)ETHER, Ribosomal RNA small subunit methyltransferase G, S-ADENOSYLMETHIONINE
Authors:Demirci, H, Belardinelli, R, Gregory, S.T, Gualerzi, C, Dahlberg, A.E, Jogl, G.
Deposit date:2009-02-11
Release date:2009-06-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and functional studies of the Thermus thermophilus 16S rRNA methyltransferase RsmG
Rna, 15, 2009
2Z2N
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BU of 2z2n by Molmil
Crystal Structure of selenomethionine substituted virginiamycin B lyase from Staphylococcus aureus
Descriptor: CHLORIDE ION, virginiamycin B lyase
Authors:Korczynska, M, Berghuis, A.M.
Deposit date:2007-05-25
Release date:2007-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for streptogramin B resistance in Staphylococcus aureus by virginiamycin B lyase
Proc.Natl.Acad.Sci.Usa, 104, 2007
4PJT
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BU of 4pjt by Molmil
Structure of PARP1 catalytic domain bound to inhibitor BMN 673
Descriptor: (8S,9R)-5-fluoro-8-(4-fluorophenyl)-9-(1-methyl-1H-1,2,4-triazol-5-yl)-2,7,8,9-tetrahydro-3H-pyrido[4,3,2-de]phthalazin-3-one, GLYCEROL, Poly [ADP-ribose] polymerase 1, ...
Authors:Aoyagi-Scharber, M, Gardberg, A.S, Arakaki, T.L.
Deposit date:2014-05-12
Release date:2014-09-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for the inhibition of poly(ADP-ribose) polymerases 1 and 2 by BMN 673, a potent inhibitor derived from dihydropyridophthalazinone.
Acta Crystallogr.,Sect.F, 70, 2014
1914
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BU of 1914 by Molmil
SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14
Descriptor: BETA-MERCAPTOETHANOL, PHOSPHATE ION, SIGNAL RECOGNITION PARTICLE 9/14 FUSION PROTEIN
Authors:Birse, D, Kapp, U, Strub, K, Cusack, S, Aberg, A.
Deposit date:1997-11-13
Release date:1998-12-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:The crystal structure of the signal recognition particle Alu RNA binding heterodimer, SRP9/14.
EMBO J., 16, 1997
4Q02
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BU of 4q02 by Molmil
Second-site screening of K-Ras in the presence of covalently attached first-site ligands
Descriptor: 3,4-difluorobenzenethiol, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
Deposit date:2014-03-31
Release date:2014-09-10
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
4Q03
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BU of 4q03 by Molmil
Second-site screening of K-Ras in the presence of covalently attached first-site ligands
Descriptor: 4-bromobenzenethiol, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
Deposit date:2014-03-31
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
2Z2O
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BU of 2z2o by Molmil
Crystal Structure of apo virginiamycin B lyase from Staphylococcus aureus
Descriptor: CHLORIDE ION, virginiamycin B lyase
Authors:Korczynska, M, Berghuis, A.M.
Deposit date:2007-05-25
Release date:2007-06-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for streptogramin B resistance in Staphylococcus aureus by virginiamycin B lyase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2MMG
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BU of 2mmg by Molmil
Structural Characterization of the Mengovirus Leader Protein Bound to Ran GTPase by Nuclear Magnetic Resonance
Descriptor: GTP-binding nuclear protein Ran
Authors:Bacot-Davis, V.R, Palmenberg, A.C, Cornilescu, C.C, Markley, J.L.
Deposit date:2014-03-15
Release date:2014-10-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PZY
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BU of 4pzy by Molmil
Second-site screening of K-Ras in the presence of covalently attached first-site ligands
Descriptor: 2-chloro-1-(1H-indol-3-yl)ethanone, GUANOSINE-5'-DIPHOSPHATE, K-Ras, ...
Authors:Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
Deposit date:2014-03-31
Release date:2014-09-10
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
2NXC
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BU of 2nxc by Molmil
Apo-form of T. thermophilus ribosomal protein L11 methyltransferase (PrmA)
Descriptor: Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2006-11-17
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
4Q01
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BU of 4q01 by Molmil
Second-site screening of K-Ras in the presence of covalently attached first-site ligands
Descriptor: GUANOSINE-5'-DIPHOSPHATE, K-Ras, MAGNESIUM ION, ...
Authors:Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
Deposit date:2014-03-31
Release date:2014-09-10
Method:X-RAY DIFFRACTION (1.291 Å)
Cite:A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
4PZZ
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BU of 4pzz by Molmil
Second-site screening of K-Ras in the presence of covalently attached first-site ligands
Descriptor: 1H-benzimidazol-2-ylmethanethiol, GUANOSINE-5'-DIPHOSPHATE, K-Ras, ...
Authors:Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
Deposit date:2014-03-31
Release date:2014-09-10
Method:X-RAY DIFFRACTION (1.403 Å)
Cite:A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
2NXN
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BU of 2nxn by Molmil
T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11
Descriptor: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2006-11-17
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
3CJQ
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BU of 3cjq by Molmil
Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11 in space group P212121
Descriptor: 50S ribosomal protein L11, IODIDE ION, N,N-dimethyl-L-methionine, ...
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
4O9H
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BU of 4o9h by Molmil
Structure of Interleukin-6 in complex with a Camelid Fab fragment
Descriptor: Heavy Chain of the Camelid Fab fragment 61H7, Interleukin-6, Light Chain of the Camelid Fab fragment 61H7
Authors:Klarenbeek, A, Blanchetot, C, Schragel, G, Sadi, A.S, Ongenae, N, Hemrika, W, Wijdenes, J, Spinelli, S, Desmyter, A, Cambillau, C, Hultberg, A, Kretz-rommel, A, Dreier, T, De haard, H.J.W, Roovers, R.C.
Deposit date:2014-01-02
Release date:2015-04-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Combining residues of naturally-occurring Camelid somatic affinity variants yields ultra-potent human therapeutic IL-6 antibodies
To be Published
2MMI
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BU of 2mmi by Molmil
Mengovirus Leader: Structural Characterization of the Mengovirus Leader Protein Bound to Ran GTPase by Nuclear Magnetic Resonance
Descriptor: Leader protein, ZINC ION
Authors:Bacot-Davis, V.R, Cornilescu, C.C, Markley, J.L, Palmenberg, A.C.
Deposit date:2014-03-15
Release date:2014-10-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
2MML
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BU of 2mml by Molmil
T47 phosphorylation of the Mengovirus Leader Protein: NMR Studies of the Phosphorylation of the Mengovirus Leader Protein Reveal Stabilization of Intermolecular Domain Interactions
Descriptor: Leader protein, ZINC ION
Authors:Bacot-Davis, V.R, Porter, F.W, Palmenberg, A.C.
Deposit date:2014-03-15
Release date:2014-10-15
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
3CJT
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BU of 3cjt by Molmil
Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11
Descriptor: 1,2-ETHANEDIOL, 50S ribosomal protein L11, CHLORIDE ION, ...
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
3CJS
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BU of 3cjs by Molmil
Minimal Recognition Complex between PrmA and Ribosomal Protein L11
Descriptor: 1,2-ETHANEDIOL, 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
3CJR
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BU of 3cjr by Molmil
Ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11 (K39A) and inhibitor Sinefungin.
Descriptor: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase, SINEFUNGIN
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008

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