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PDB: 566 results

2VBK
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NATIVE TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6
Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, GLYCEROL, ...
Authors:Mueller, J.J, Barbirz, S, Heinle, K, Freiberg, A, Seckler, R, Heinemann, U.
Deposit date:2007-09-14
Release date:2008-04-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:An intersubunit active site between supercoiled parallel beta helices in the trimeric tailspike endorhamnosidase of Shigella flexneri Phage Sf6.
Structure, 16, 2008
1EBF
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HOMOSERINE DEHYDROGENASE FROM S. CEREVISIAE COMPLEX WITH NAD+
Descriptor: HOMOSERINE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:DeLaBarre, B, Thompson, P.R, Wright, G.D, Berghuis, A.M.
Deposit date:2000-01-24
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of homoserine dehydrogenase suggest a novel catalytic mechanism for oxidoreductases.
Nat.Struct.Biol., 7, 2000
2PE5
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Crystal Structure of the Lac Repressor bound to ONPG in repressed state
Descriptor: 2-nitrophenyl beta-D-galactopyranoside, DNA (5'-D(*DAP*DAP*DTP*DTP*DGP*DTP*DGP*DAP*DGP*DCP*DGP*DCP*DTP*DCP*DAP*DCP*DAP*DAP*DTP*DT)-3'), Lactose operon repressor
Authors:Daber, R, Stayrook, S.E, Rosenberg, A, Lewis, M.
Deposit date:2007-04-02
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural analysis of lac repressor bound to allosteric effectors
J.Mol.Biol., 370, 2007
2NXN
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T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11
Descriptor: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2006-11-17
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
1914
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BU of 1914 by Molmil
SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14
Descriptor: BETA-MERCAPTOETHANOL, PHOSPHATE ION, SIGNAL RECOGNITION PARTICLE 9/14 FUSION PROTEIN
Authors:Birse, D, Kapp, U, Strub, K, Cusack, S, Aberg, A.
Deposit date:1997-11-13
Release date:1998-12-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:The crystal structure of the signal recognition particle Alu RNA binding heterodimer, SRP9/14.
EMBO J., 16, 1997
2MMK
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Y41 and T47 phosphorylation of the Mengovirus Leader Protein: NMR Studies of the Phosphorylation of the Mengovirus Leader Protein Reveal Stabilization of Intermolecular Domain Interactions
Descriptor: Leader protein, ZINC ION
Authors:Bacot-Davis, V.R, Porter, F.W, Palmenberg, A.C.
Deposit date:2014-03-15
Release date:2014-10-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
2BAI
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The Zinc finger domain of Mengovirus Leader polypeptide
Descriptor: Genome polyprotein, ZINC ION
Authors:Cornilescu, C.C, Porter, F.W, Qin, Z, Lee, M.S, Palmenberg, A.C, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-10-14
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the mengovirus Leader protein zinc-finger domain.
Febs Lett., 582, 2008
2GN4
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Crystal structure of UDP-GlcNAc inverting 4,6-dehydratase in complex with NADPH and UDP-GlcNAc
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, UDP-GlcNAc C6 dehydratase, ...
Authors:Ishiyama, N, Creuzenet, C, Lam, J.S, Berghuis, A.M.
Deposit date:2006-04-09
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Studies of FlaA1 from Helicobacter pylori Reveal the Mechanism for Inverting 4,6-Dehydratase Activity.
J.Biol.Chem., 281, 2006
2CCQ
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The PUB domain functions as a p97 binding module in human peptide N-glycanase.
Descriptor: GLYCEROL, PEPTIDE N-GLYCANASE HOMOLOG
Authors:Allen, M.D, Buchberger, A, Bycroft, M.
Deposit date:2006-01-17
Release date:2006-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Pub Domain Functions as a P97 Binding Module in Human Peptide N-Glycanase.
J.Biol.Chem., 281, 2006
2MMG
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Structural Characterization of the Mengovirus Leader Protein Bound to Ran GTPase by Nuclear Magnetic Resonance
Descriptor: GTP-binding nuclear protein Ran
Authors:Bacot-Davis, V.R, Palmenberg, A.C, Cornilescu, C.C, Markley, J.L.
Deposit date:2014-03-15
Release date:2014-10-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
2NXC
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Apo-form of T. thermophilus ribosomal protein L11 methyltransferase (PrmA)
Descriptor: Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2006-11-17
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
1I4N
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CRYSTAL STRUCTURE OF INDOLEGLYCEROL PHOSPHATE SYNTHASE FROM THERMOTOGA MARITIMA
Descriptor: INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE, SULFATE ION
Authors:Knoechel, T, Pappenberger, A, Jansonius, J.N, Kirschner, K.
Deposit date:2001-02-22
Release date:2002-03-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of indoleglycerol-phosphate synthase from Thermotoga maritima. Kinetic stabilization by salt bridges.
J.Biol.Chem., 277, 2002
6SGR
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Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
Descriptor: DARPin, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrB
Authors:Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
Deposit date:2019-08-05
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
2JTF
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Solution Structure of the PHF20L1 MBT domain
Descriptor: PHD finger protein 20-like 1
Authors:Brockmann, C, Iberg, A.N, Rehbein, K, Diehl, A, Bedford, M.T, Oschkinat, H.
Deposit date:2007-07-30
Release date:2008-08-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Analysis of Histone H4K20 Methyllysine Recognition by the MBT Domain of PHF20L1
To be Published
1B87
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BU of 1b87 by Molmil
CRYSTAL STRUCTURE OF AN AMINOGLYCOSIDE 6'-N-ACETYLTRANSFERASE
Descriptor: ACETYL COENZYME *A, PROTEIN (AMINOGLYCOSIDE N6'-ACETYLTRANSFERASE TYPE 1)
Authors:Wybenga-Groot, L.E, Berghuis, A.M.
Deposit date:1999-02-09
Release date:1999-06-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of an aminoglycoside 6'-N-acetyltransferase: defining the GCN5-related N-acetyltransferase superfamily fold.
Structure Fold.Des., 7, 1999
6SGU
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BU of 6sgu by Molmil
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc
Descriptor: DARPin, Multidrug efflux pump subunit AcrB
Authors:Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
Deposit date:2019-08-05
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
6SGT
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BU of 6sgt by Molmil
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc with cardiolipin
Descriptor: DARPin, Multidrug efflux pump subunit AcrB
Authors:Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
Deposit date:2019-08-05
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
6SBJ
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BU of 6sbj by Molmil
X-ray structure of mus musculus Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) apo-form uuncomplexed
Descriptor: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
Authors:Rupp, B, Naschberger, A, Weiss, A.K.H.
Deposit date:2019-07-21
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
6SBI
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X-ray structure of murine Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate
Descriptor: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
Authors:Rupp, B, Naschberger, A, Weiss, A.K.H.
Deposit date:2019-07-21
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
6SGS
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BU of 6sgs by Molmil
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc
Descriptor: DARPin, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrB
Authors:Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
Deposit date:2019-08-05
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
4DEM
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BU of 4dem by Molmil
Crystal structure of human FPPS in complex with YS_04_70
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({4-[4-(propan-2-yloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)
Authors:Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2012-01-20
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and Synthesis of Active Site Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Apoptosis and Inhibition of ERK Phosphorylation in Multiple Myeloma Cells.
J.Med.Chem., 55, 2012
6RQ7
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BU of 6rq7 by Molmil
Gadolinium MRI contrast compound binding in human plasma glycoprotein afamin - resurrection of highly anisotropic data
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rupp, B, Bowler, M.W, Naschberger, A, Juyoux, P, vonVelsen, J.
Deposit date:2019-05-15
Release date:2019-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Controlled dehydration, structural flexibility and gadolinium MRI contrast compound binding in the human plasma glycoprotein afamin.
Acta Crystallogr D Struct Biol, 75, 2019
6PSF
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Rhinovirus C15 complexed with domains I and II of receptor CDHR3
Descriptor: Cadherin-related family member 3, Capsid protein VP1, Capsid protein VP2, ...
Authors:Sun, Y, Watters, K, Klose, T, Palmenberg, A.C.
Deposit date:2019-07-12
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of rhinovirus C15a bound to its cadherin-related protein 3 receptor.
Proc.Natl.Acad.Sci.USA, 117, 2020
2M7Y
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The Mengovirus Leader protein
Descriptor: Leader peptide, ZINC ION
Authors:Cornilescu, C.C, Porter, F.W, Zhao, K.Q, Davis, V, Palmenberg, A.C, Markley, J.L.
Deposit date:2013-05-02
Release date:2013-10-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Full Length Mengovirus Leader
To be Published
1D5V
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SOLUTION STRUCTURE OF THE FORKHEAD DOMAIN OF THE ADIPOCYTE-TRANSCRIPTION FACTOR FREAC-11 (S12)
Descriptor: S12 TRANSCRIPTION FACTOR (FKH-14)
Authors:van Dongen, M.J.P, Cederberg, A, Carlsson, P, Enerback, S, Wikstrom, M.
Deposit date:1999-10-12
Release date:2000-10-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and dynamics of the DNA-binding domain of the adipocyte-transcription factor FREAC-11.
J.Mol.Biol., 296, 2000

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