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PDB: 163 件

8AH3
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DG04279 glycoside hydrolase family 172
分子名称: CALCIUM ION, DG02479 GH127
著者Al-Jourani, O, Lowe, E.C, Basle, A.
登録日2022-07-20
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mining the human gut microbiome identifies mycobacterial D-arabinan degrading enzymes
To Be Published
2XJH
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Structure and Copper-binding Properties of Methanobactins from Methylosinus trichosporium OB3b
分子名称: COPPER (II) ION, METHANOBACTIN MB-OB3B, SODIUM ION
著者El-Ghazouani, A, Basle, A, Firbank, S.J, Knapp, C.W, Gray, J, Graham, D.W, Dennison, C.
登録日2010-07-06
公開日2011-02-02
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献Copper-Binding Properties and Structures of Methanobactins from Methylosinus Trichosporium Ob3B.
Inorg.Chem., 50, 2011
2YGI
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Methanobactin HM1
分子名称: COPPER (II) ION, METHANOBACTIN HM1
著者Ghazouani, A, Basle, A, Firbank, S.J, Gray, J, Dennison, C.
登録日2011-04-18
公開日2012-04-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Variations in Methanobactin Structure Influences Copper Utilization by Methane-Oxidizing Bacteria.
Proc.Natl.Acad.Sci.USA, 109, 2012
2YGJ
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Methanobactin MB4
分子名称: COPPER (II) ION, METHANOBACTIN MB4, SODIUM ION
著者Ghazouani, A, Basle, A, Firbank, S.J, Gray, J, Dennison, C.
登録日2011-04-18
公開日2012-04-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Variations in Methanobactin Structure Influences Copper Utilization by Methane-Oxidizing Bacteria.
Proc.Natl.Acad.Sci.USA, 109, 2012
2XJI
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Structure and Copper-binding Properties of Methanobactins from Methylosinus trichosporium OB3b
分子名称: COPPER (II) ION, METHANOBACTIN MB-OB3B
著者El-Ghazouani, A, Basle, A, Firbank, S.J, Knapp, C.W, Gray, J, Graham, D.W, Dennison, C.
登録日2010-07-06
公開日2011-02-02
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Copper-Binding Properties and Structures of Methanobactins from Methylosinus Trichosporium Ob3B.
Inorg.Chem., 50, 2011
2YPJ
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Non-catalytic carbohydrate binding module CBM65B
分子名称: ENDOGLUCANASE CEL5A, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Luis, A.S, Venditto, I, Prates, J.A.M, Ferreira, L.M.A, Temple, M.J, Rogowski, A, Basle, A, Xue, J, Knox, J.P, Gilbert, H.J, Fontes, C.M.G.A, Najmudin, S.
登録日2012-10-30
公開日2012-12-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Understanding How Non-Catalytic Carbohydrate Binding Modules Can Display Specificity for Xyloglucan
J.Biol.Chem., 288, 2013
6S20
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Metabolism of multiple glycosaminoglycans by bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus (BT33336S-sulf)
分子名称: 2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, CALCIUM ION, N-acetylgalactosamine-6-O-sulfatase, ...
著者Ndeh, D, Basle, A, Strahl, H, Henrissat, B, Terrapon, N, Cartmell, A.
登録日2019-06-19
公開日2020-02-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus.
Nat Commun, 11, 2020
6S21
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Metabolism of multiple glycosaminoglycans by bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus (BT33494S-sulf)
分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid, CALCIUM ION, Endo-4-O-sulfatase
著者Ndeh, D, Basle, A, Strahl, H, Henrissat, B, Terrapon, N, Cartmell, A.
登録日2019-06-19
公開日2020-02-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus.
Nat Commun, 11, 2020
8BMZ
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Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin
分子名称: Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BMY
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Bacteroides thetaiotaomicron surface lipoprotein bound to cyanocobalamin
分子名称: CHLORIDE ION, CYANOCOBALAMIN, Putative surface layer protein, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BN0
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BU of 8bn0 by Molmil
Bacteroides thetaiotaomicron surface protein BT1954 bound to
分子名称: CHLORIDE ION, COB(II)INAMIDE, CYANIDE ION, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BMX
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Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein
分子名称: Putative TonB-linked outer membrane receptor, YncE family protein
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-09-20
実験手法X-RAY DIFFRACTION (3.72 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
5ARN
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BU of 5arn by Molmil
Cu(I)-CSP3 (COPPER STORAGE PROTEIN 3) FROM METHYLOSINUS
分子名称: COPPER (I) ION, CSP3
著者Vita, N, Landolfi, G, Basle, A, Platsaki, S, Waldron, K, Dennison, C.
登録日2015-09-25
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Novel Cytosolic Copper Storage Proteins
To be Published
5A7V
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BU of 5a7v by Molmil
The GH130 family of mannoside phosphorylases contains glycoside hydrolases that target beta-1,2 mannosidic linkages in Candida mannan
分子名称: PUTATIVE GLYCOSIDASE PH117-RELATED, SULFATE ION, alpha-D-mannopyranose, ...
著者Cuskin, F, Basle, A, Day, A.M, Ladeveze, S, Potocki-Veronese, G, Davies, G.J, Gilbert, H.J, Lowe, E.
登録日2015-07-10
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Gh130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases that Target Beta-1,2 Mannosidic Linkages in Candida Mannan
J.Biol.Chem., 290, 2015
5ARM
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BU of 5arm by Molmil
APO-CSP3 (COPPER STORAGE PROTEIN 3) FROM METHYLOSINUS
分子名称: CSP3
著者Vita, N, Landolfi, G, Basle, A, Platsaki, S, Waldron, K, Dennison, C.
登録日2015-09-25
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.194 Å)
主引用文献Novel Cytosolic Copper Storage Proteins
To be Published
7OEU
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BU of 7oeu by Molmil
Model of open pentamer of the Haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction
分子名称: Haliangium ochraceum encapsulated ferritin, Linocin_M18 bacteriocin protein
著者Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
登録日2021-05-04
公開日2022-02-09
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022
7OXW
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BU of 7oxw by Molmil
CrabP2 mutant R30DK31D
分子名称: ACETATE ION, Cellular retinoic acid-binding protein 2, SULFATE ION
著者Pastok, M.W, Basle, A, Endicott, J.A.
登録日2021-06-23
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structural requirements for the specific binding of CRABP2 to cyclin D3
To Be Published
7OXX
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CrabP2 mutant R30AK31A
分子名称: Cellular retinoic acid-binding protein 2, SODIUM ION
著者Tomlinson, C.W.E, Basle, A, Pohl, E.
登録日2021-06-23
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Structural requirements for the specific binding of CRABP2 to cyclin D3
To Be Published
6EX3
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BU of 6ex3 by Molmil
Staphylococcus aureus superoxide dismutase SodA
分子名称: FE (III) ION, Superoxide dismutase
著者Barwinska-Sendra, A, Basle, A, Waldron, K.
登録日2017-11-07
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An evolutionary path to altered cofactor specificity in a metalloenzyme
Nat Commun, 2020
7ACX
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H/L (SLPH/SLPL) complex from C. difficile (R7404 strain)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, S-layer protein, SULFATE ION
著者Lanzoni-Mangutchi, P, Barwinska-Sendra, A, Basle, A, El Omari, K, Wagner, A, Salgado, P.S.
登録日2020-09-11
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
7ACW
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LID/HID (LMW SLP and HMW SLP interacting domains) from C. difficile (R7404 strain)
分子名称: S-layer protein
著者Barwinska-Sendra, A, Lanzoni-Mangutchi, P, Basle, A, Salgado, P.S.
登録日2020-09-11
公開日2022-03-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
5MUJ
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BU of 5muj by Molmil
BT0996 RGII Chain B Complex
分子名称: ACETATE ION, Beta-galactosidase, alpha-L-rhamnopyranose-(1-2)-[alpha-L-rhamnopyranose-(1-3)]alpha-L-arabinopyranose-(1-4)-[4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-alpha-L-fucopyranose-(1-2)]beta-D-galactopyranose-(1-2)-alpha-D-aceric acid-(1-4)-alpha-L-rhamnopyranose-(1-3)-3-C-(hydroxylmethyl)-alpha-D-erythrofuranose
著者Cartmell, A, Basle, A, Ndeh, D, Luis, A.S, Venditto, I, Labourel, A, Rogowski, A, Gilbert, H.J.
登録日2017-01-13
公開日2017-04-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Complex pectin metabolism by gut bacteria reveals novel catalytic functions.
Nature, 544, 2017
6EX4
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Staphylococcus aureus cambialistic superoxide dismutase SodM
分子名称: FE (III) ION, Superoxide dismutase
著者Barwinska-Sendra, A, Basle, A, Waldron, K.
登録日2017-11-07
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An evolutionary path to altered cofactor specificity in a metalloenzyme
Nat Commun, 2020
6EX5
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BU of 6ex5 by Molmil
Staphylococcus aureus triple mutant of superoxide dismutase SodM
分子名称: MANGANESE (II) ION, Superoxide dismutase
著者Barwinska-Sendra, A, Basle, A, Waldron, K.
登録日2017-11-07
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献An evolutionary path to altered cofactor specificity in a metalloenzyme
Nat Commun, 2020
6T2S
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BU of 6t2s by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
分子名称: Glycoside hydrolase family 16 protein, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose
著者Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
登録日2019-10-09
公開日2020-07-08
最終更新日2020-08-26
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020

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