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PDB: 52 件
6EMY
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BU of 6emy by Molmil
Structure of the Tn1549 transposon Integrase (aa 82-397, Y379F) in complex with transposon right end DNA
分子名称: DNA (20-MER), DNA (26-MER), Int protein
著者Schulz, E.C, Rubio-Cosials, A, Barabas, O.
登録日2017-10-04
公開日2018-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
Cell, 173, 2018
6EN2
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BU of 6en2 by Molmil
Structure of the Tn1549 transposon Integrase (aa 82-397, R225K) in complex with a circular intermediate DNA (CI6b-DNA)
分子名称: DI(HYDROXYETHYL)ETHER, DNA (45-MER), Int protein
著者Rubio-Cosials, A, Barabas, O.
登録日2017-10-04
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
Cell, 173, 2018
5JJV
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BU of 5jjv by Molmil
Crystal structure of XerH site-specific recombinase bound to palindromic difH substrate: post-cleavage complex
分子名称: CHLORIDE ION, DNA (5'-D(*TP*AP*GP*TP*TP*AP*TP*GP*AP*AP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*CP*AP*GP*TP*TP*TP*TP*CP*AP*TP*AP*AP*CP*TP*A)-3'), ...
著者Bebel, A, Barabas, O.
登録日2016-04-25
公開日2016-12-28
最終更新日2018-09-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural snapshots of Xer recombination reveal activation by synaptic complex remodeling and DNA bending.
Elife, 5, 2016
6ZK6
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BU of 6zk6 by Molmil
Protein Phosphatase 1 (PP1) T320E mutant
分子名称: FE (III) ION, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Salvi, F, Barabas, O, Koehn, M.
登録日2020-06-29
公開日2020-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Towards Dissecting the Mechanism of Protein Phosphatase-1 Inhibition by Its C-Terminal Phosphorylation.
Chembiochem, 22, 2021
3TRN
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BU of 3trn by Molmil
Crystal structure of M-PMV dUTPASE post-inversion product (dUMP) complex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2011-09-09
公開日2011-10-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion
To be Published
3TPN
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BU of 3tpn by Molmil
Crystal structure of M-PMV dUTPASE complexed with dUPNPP, substrate
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2011-09-08
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion
To be Published
5CR4
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BU of 5cr4 by Molmil
Crystal structure of the Sleeping Beauty transposase catalytic domain
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CITRIC ACID, GLYCEROL, ...
著者Voigt, F, Barabas, O.
登録日2015-07-22
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Sleeping Beauty transposase structure allows rational design of hyperactive variants for genetic engineering.
Nat Commun, 7, 2016
5NEW
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BU of 5new by Molmil
RNA-RNA base stacking in the crystal structure of an Hfq6:RNA dimer
分子名称: RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*U)-3'), RNA-binding protein Hfq, ...
著者Schulz, E.C, Barabas, O.
登録日2017-03-12
公開日2017-10-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.511 Å)
主引用文献Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq.
Sci Rep, 7, 2017
4H4A
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BU of 4h4a by Molmil
Crystal structure of the C-terminal domain of Drosophila melanogaster Zucchini
分子名称: Mitochondrial cardiolipin hydrolase
著者Voigt, F, Schulz, E.C, Barabas, O.
登録日2012-09-17
公開日2012-11-07
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the primary piRNA biogenesis factor Zucchini reveals similarity to the bacterial PLD endonuclease Nuc.
Rna, 18, 2012
3EHW
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BU of 3ehw by Molmil
Human dUTPase in complex with alpha,beta-imido-dUTP and Mg2+: visualization of the full-length C-termini in all monomers and suggestion for an additional metal ion binding site
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, MAGNESIUM ION, dUTP pyrophosphatase
著者Takacs, E, Barabas, O, Vertessy, B.G.
登録日2008-09-15
公開日2008-09-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Human dUTPase in complex with alpha,beta-imido-dUTP and Mg2+: visualization of the full-length C-termini in all monomers and suggestion for an additional metal ion binding site
To be Published
4PNO
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BU of 4pno by Molmil
Escherichia coli Hfq-RNA complex at 0.97 A Resolution
分子名称: RNA-binding protein Hfq, URIDINE-5'-MONOPHOSPHATE
著者Schulz, E.C, Barabas, O.
登録日2014-05-24
公開日2014-11-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Structure of an Escherichia coli Hfq:RNA complex at 0.97 angstrom resolution.
Acta Crystallogr.,Sect.F, 70, 2014
2XM3
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BU of 2xm3 by Molmil
Deinococcus radiodurans ISDra2 Transposase Left end DNA complex
分子名称: 5'-D(*TP*TP*AP*GP*T)-3', ACETATE ION, DRA2 TRANSPOSASE BINDING ELEMENT, ...
著者Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F.
登録日2010-07-22
公開日2010-10-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Embo J., 29, 2010
3ECY
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BU of 3ecy by Molmil
Crystal structural analysis of Drosophila melanogaster dUTPase
分子名称: CG4584-PA, isoform A (BcDNA.LD08534)
著者Takacs, E, Barabas, O, Vertessy, B.G.
登録日2008-09-02
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Molecular shape and prominent role of beta-strand swapping in organization of dUTPase oligomers.
Febs Lett., 583, 2009
3TS6
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BU of 3ts6 by Molmil
Crystal structure of M-PMV DUTPASE relaxed end-product (dUMP) complex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2011-09-12
公開日2011-10-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion
To be Published
3TTA
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BU of 3tta by Molmil
Crystal structure of M-PMV DUTPASE relaxed end-product (dUMP) complex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2011-09-14
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion
To be Published
3TSL
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BU of 3tsl by Molmil
Crystal structure of M-PMV DUTPASE relaxed end-product (dUMP) complex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2011-09-13
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion
To be Published
6EN1
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BU of 6en1 by Molmil
Structure of the Tn1549 transposon Integrase (aa 82-397, R225K) in complex with a circular intermediate DNA (CI6a-DNA)
分子名称: DI(HYDROXYETHYL)ETHER, DNA (45-MER), Int protein
著者Rubio-Cosials, A, Barabas, O.
登録日2017-10-04
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
Cell, 173, 2018
6EMZ
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BU of 6emz by Molmil
Structure of the Tn1549 transposon Integrase (aa 82-397, R225K) in complex with circular intermediate DNA (CI5-DNA)
分子名称: DNA (44-MER), Int protein
著者Rubio-Cosials, A, Barabas, O.
登録日2017-10-04
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
Cell, 173, 2018
6FI8
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BU of 6fi8 by Molmil
Crystal structure of the IS608 transposase in complex with left end 29-mer DNA hairpin and a 6-mer DNA representing the intact target site: pre-cleavage target capture complex
分子名称: CALCIUM ION, DNA 29-MER (LE29), DNA 6-MER (T6'), ...
著者Morero, N.R, Barabas, O.
登録日2018-01-17
公開日2018-03-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Targeting IS608 transposon integration to highly specific sequences by structure-based transposon engineering.
Nucleic Acids Res., 46, 2018
2D4N
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BU of 2d4n by Molmil
Crystal Structure of M-PMV dUTPase complexed with dUPNPP, substrate analogue
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DU, ...
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2005-10-20
公開日2006-11-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.
Nucleic Acids Res., 35, 2007
2XMA
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BU of 2xma by Molmil
DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE RIGHT END DNA COMPLEX
分子名称: DRA2 TRANSPOSASE RIGHT END RECOGNITION SITE, MAGNESIUM ION, TRANSPOSASE
著者Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F.
登録日2010-07-26
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Embo J., 29, 2010
2D4M
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BU of 2d4m by Molmil
Crystal Structure of apo M-PMV dUTPase
分子名称: DU
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2005-10-20
公開日2006-11-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.
Nucleic Acids Res., 35, 2007
2D4L
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BU of 2d4l by Molmil
Crystal structure of truncated in C-terminal M-PMV dUTPase
分子名称: DU
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2005-10-20
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.
Nucleic Acids Res., 35, 2007
2XO6
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BU of 2xo6 by Molmil
DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE
分子名称: 5'-D(*TP*TP*GP*AP*TP*G)-3', ACETATE ION, CADMIUM ION, ...
著者Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F.
登録日2010-08-09
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Embo J., 29, 2010
2XQC
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BU of 2xqc by Molmil
DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE AND ZN
分子名称: 5'-D(TP*TP*GP*AP*TP*GP)-3', DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE, TRANSPOSASE, ...
著者Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F.
登録日2010-09-01
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Embo J., 29, 2010

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