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PDB: 68 件

2FA4
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Crystal Structure of Oxidized Form from Saccharomyces cerevisiae
分子名称: Thioredoxin II
著者Bao, R, Tang, Y.J, Zhou, C.Z, Chen, Y.
登録日2005-12-06
公開日2006-12-06
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structure of the yeast cytoplasmic thioredoxin Trx2
Proteins, 66, 2007
4Y2O
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Structure of CFA/I pili chaperone-major subunit complex (CfaA-CfaB)
分子名称: CFA/I fimbrial subunit B, CfA/I fimbrial subunit A (Colonization factor antigen subunit A putative chaperone), NICKEL (II) ION, ...
著者Bao, R, Xia, D.
登録日2015-02-10
公開日2016-08-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.419 Å)
主引用文献Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli.
Mol. Microbiol., 102, 2016
4Y2N
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Structure of CFA/I pili major subunit CfaB trimer
分子名称: 1,2-ETHANEDIOL, CFA/I fimbrial subunit B, MAGNESIUM ION
著者Bao, R, Xia, D.
登録日2015-02-10
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli.
Mol. Microbiol., 102, 2016
7X8X
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structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
分子名称: 4-[1-[3-[4-[(4-fluoranyl-2-methyl-1H-indol-5-yl)oxy]-6-methoxy-quinazolin-7-yl]oxypropyl]piperidin-4-yl]benzamide, 4-[[3,5-bis(fluoranyl)phenyl]methyl]-N-[(4-bromophenyl)methyl]piperazine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit 1, ...
著者Bao, R, Luo, Y.F, Zhu, Y.B, Yang, Y, Zhou, Y.Z.
登録日2022-03-15
公開日2023-04-12
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Discovery and Mechanistic Study of Novel Mycobacterium tuberculosis ClpP1P2 Inhibitors
J.Med.Chem., 66, 2023
4Y2L
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Structure of CFA/I pili major subunit CfaB trimer
分子名称: CALCIUM ION, CFA/I fimbrial subunit B, ISOPROPYL ALCOHOL
著者Bao, R, Xia, D.
登録日2015-02-10
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli.
Mol. Microbiol., 102, 2016
5WZE
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The structure of Pseudomonas aeruginosa aminopeptidase PepP
分子名称: 1,2-ETHANEDIOL, ALANINE, Aminopeptidase P, ...
著者Bao, R, Peng, C.T, Liu, L, He, L.H, Li, C.C, Li, T, Shen, Y.L, Zhu, Y.B, Song, Y.J.
登録日2017-01-17
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献Structure-Function Relationship of Aminopeptidase P from Pseudomonas aeruginosa.
Front Microbiol, 8, 2017
4NCD
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Crystal Structure of Class 5 Fimbriae Chaperone CfaA
分子名称: Gram-negative pili assembly chaperone, N-terminal domain protein
著者Bao, R, Xia, D.
登録日2013-10-24
公開日2014-08-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.037 Å)
主引用文献Structure of CfaA Suggests a New Family of Chaperones Essential for Assembly of Class 5 Fimbriae.
Plos Pathog., 10, 2014
2OE0
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Crystal Structure of Mitochondrial Thioredoxin 3 from Saccharomyces cerevisiae
分子名称: Thioredoxin-3
著者Bao, R, Zhang, Y.R, Zhou, C.Z, Chen, Y.X.
登録日2006-12-27
公開日2008-01-08
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and mechanistic analyses of yeast mitochondrial thioredoxin Trx3 reveal putative function of its additional cysteine residues
Biochim.Biophys.Acta, 1794, 2009
2OE1
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Crystal Structure of Mitochondrial Thioredoxin 3 from Saccharomyces cerevisiae (reduced form)
分子名称: SULFATE ION, Thioredoxin-3
著者Bao, R, Zhang, Y.R, Zhou, C.Z, Chen, Y.X.
登録日2006-12-28
公開日2008-01-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and mechanistic analyses of yeast mitochondrial thioredoxin Trx3 reveal putative function of its additional cysteine residues
Biochim.Biophys.Acta, 1794, 2009
2OE3
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Crystal Structure of Mitochondrial Thioredoxin 3 from Saccharomyces cerevisiae (oxidized form)
分子名称: Thioredoxin-3
著者Bao, R, Zhang, Y.R, Zhou, C.Z, Chen, Y.X.
登録日2006-12-28
公開日2008-01-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and mechanistic analyses of yeast mitochondrial thioredoxin Trx3 reveal putative function of its additional cysteine residues
Biochim.Biophys.Acta, 1794, 2009
3E8L
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The Crystal Structure of the Double-headed Arrowhead Protease Inhibitor A in Complex with Two Trypsins
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Bao, R, Jiang, C.-H, Chi, C.W, Lin, S.X, Chen, Y.X.
登録日2008-08-20
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献The ternary structure of double-headed arrowhead protease inhibitor API-A complexed with two trypsins reveals a novel reactive site conformation.
J.Biol.Chem., 284, 2009
5YFE
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Enzymatic and structural characterization of the poly (ethylene terephthalate) hydrolase PETase from I. sakaiensis
分子名称: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
著者Bao, R, He, L.H, Liu, B.
登録日2017-09-21
公開日2018-09-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Protein Crystallography and Site-Direct Mutagenesis Analysis of the Poly(ethylene terephthalate) Hydrolase PETase from Ideonella sakaiensis.
Chembiochem, 2018
6IW7
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structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
分子名称: (2S)-2-benzamido-4-methyl-pentanoic acid, 4-[(4-fluoro-2-methyl-3H-indol-5-yl)oxy]-6-methoxy-7-[3-(pyrrolidin-1-yl)propoxy]quinazoline, ATP-dependent Clp protease proteolytic subunit 1, ...
著者Bao, R, Luo, Y.F, Zhu, Y.B, Yang, Y, Zhou, Y.Z.
登録日2018-12-04
公開日2020-01-01
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.692121 Å)
主引用文献structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
To Be Published
6K73
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Chaperone-tip adhesin complex is vital for synergistic activation of CFA/I fimbriae biogenesis
分子名称: CFA/I fimbrial subunit E, Colonization factor antigen I chaperone CfaA, GLYCEROL, ...
著者Bao, R, He, L.H.
登録日2019-06-05
公開日2020-06-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7742 Å)
主引用文献Chaperone-tip adhesin complex is vital for synergistic activation of CFA/I fimbriae biogenesis.
Plos Pathog., 16, 2020
4F8L
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X-ray structure of PsaA from Yersinia pestis, in complex with galactose and AEBSF
分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, BROMIDE ION, GLYCINE, ...
著者Bao, R, Esser, L, Xia, D.
登録日2012-05-17
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for the specific recognition of dual receptors by the homopolymeric pH 6 antigen (Psa) fimbriae of Yersinia pestis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F8P
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X-ray structure of PsaA from Yersinia pestis, in complex with galactose
分子名称: ACETATE ION, TERT-BUTYL FORMATE, beta-D-galactopyranose, ...
著者Bao, R, Esser, L, Xia, D.
登録日2012-05-17
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for the specific recognition of dual receptors by the homopolymeric pH 6 antigen (Psa) fimbriae of Yersinia pestis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F8O
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X-ray structure of PsaA from Yersinia pestis, in complex with lactose and AEBSF
分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CHLORIDE ION, GUANIDINE, ...
著者Bao, R, Esser, L, Xia, D.
登録日2012-05-17
公開日2013-05-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the specific recognition of dual receptors by the homopolymeric pH 6 antigen (Psa) fimbriae of Yersinia pestis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F8N
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X-ray structure of PsaA from Yersinia pestis, in complex with galactose and phosphate choline
分子名称: CHLORIDE ION, GUANIDINE, PHOSPHOCHOLINE, ...
著者Bao, R, Esser, L, Xia, D.
登録日2012-05-17
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structural basis for the specific recognition of dual receptors by the homopolymeric pH 6 antigen (Psa) fimbriae of Yersinia pestis.
Proc.Natl.Acad.Sci.USA, 110, 2013
7VK9
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Crystal structure of xCas9 P411T
分子名称: CRISPR-associated endonuclease Cas9/Csn1
著者Bao, R, Liu, H.Y, Luo, Y.Z, Song, Y.J.
登録日2021-09-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and Dynamics Studies of the Spcas9 Variant Provide Insights into the Regulatory Role of the REC1 Domain
Acs Catalysis, 12, 2022
7W2Q
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Crystal structure of Pseudomonas aeruginosa transcriptional regulator PvrA in the narrow conformation
分子名称: Probable transcriptional regulator
著者Bao, R, Zhu, Y.B.
登録日2021-11-24
公開日2022-11-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pseudomonas aeruginosa PvrA cooperatively binds to multiple pseudo-palindromic sites to hyper stimulate target gene expression
To be published
7W2O
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Crystal structure of Pseudomonas aeruginosa transcriptional regulator PvrA in the wide conformation
分子名称: Probable transcriptional regulator
著者Bao, R, Zhu, Y.B.
登録日2021-11-24
公開日2022-11-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Pseudomonas aeruginosa PvrA cooperatively binds to multiple pseudo-palindromic sites to hyper stimulate target gene expression
To be published
7EBQ
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The structural analysis of A.Muciniphila sulfatase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Sulfatase
著者Bao, R, Li, C.C, Tang, X.Y, Zhu, Y.B, Song, Y.J, Zhao, N.L, Huang, Q, Mou, X.Y, Luo, G.H, Liu, T.G.
登録日2021-03-10
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural analysis of the sulfatase AmAS from Akkermansia muciniphila.
Acta Crystallogr D Struct Biol, 77, 2021
7EBP
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The structural analysis of A.Muciniphila sulfatase
分子名称: CALCIUM ION, GLYCEROL, Sulfatase
著者Bao, R, Li, C.C, Tang, X.Y, Zhu, Y.B, Song, Y.J, Zhao, N.L, Huang, Q, Mou, X.Y, Luo, G.H, Liu, T.G.
登録日2021-03-10
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.80000055 Å)
主引用文献Structural analysis of the sulfatase AmAS from Akkermansia muciniphila.
Acta Crystallogr D Struct Biol, 77, 2021
7EZT
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The structure and functional mechanism of nucleotide regulated acetylhexosaminidase Am2136 from Akkermansia muciniphila
分子名称: Beta-N-acetylhexosaminidase, MAGNESIUM ION
著者Bao, R, Li, C.C, Tang, X.Y, Zhu, Y.B, Song, Y.J, Zhao, N.L, Huang, Q, Mou, X.Y, Luo, G.H, Liu, T.G.
登録日2021-06-02
公開日2022-11-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Nucleotide binding as an allosteric regulatory mechanism for Akkermansia muciniphila beta- N -acetylhexosaminidase Am2136.
Gut Microbes, 14, 2022
6L3X
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Discovery of novel peptidomimetic boronate ClpP inhibitors with noncanonical enzyme mechanism as potent virulence blockers in vitro and in vivo
分子名称: ATP-dependent Clp protease proteolytic subunit, [(1~{R})-1-[[(2~{S})-2-[[2,5-bis(chloranyl)phenyl]carbonylamino]-3-(1~{H}-indol-3-yl)propanoyl]amino]-3-methyl-butyl]boronic acid
著者Luo, Y.F, Bao, R, Ju, Y, He, L.H.
登録日2019-10-15
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3054 Å)
主引用文献Discovery of Novel Peptidomimetic Boronate ClpP Inhibitors with Noncanonical Enzyme Mechanism as Potent Virulence Blockersin Vitroandin Vivo.
J.Med.Chem., 63, 2020

 

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