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PDB: 27 results

4RND
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Crystal Structure of the subunit DF-assembly of the eukaryotic V-ATPase.
Descriptor: GLYCEROL, V-type proton ATPase subunit D, V-type proton ATPase subunit F
Authors:Balakrishna, A.M, Basak, S, Gruber, G.
Deposit date:2014-10-24
Release date:2014-12-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Crystal Structure of Subunits D and F in Complex Gives Insight into Energy Transmission of the Eukaryotic V-ATPase from Saccharomyces cerevisiae.
J.Biol.Chem., 290, 2015
4DT0
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The structure of the peripheral stalk subunit E from Pyrococcus horikoshii
Descriptor: V-type ATP synthase subunit E
Authors:Balakrishna, A.M, Gruber, G.
Deposit date:2012-02-20
Release date:2012-05-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:The structure of subunit E of the Pyrococcus horikoshii OT3 A-ATP synthase gives insight into the elasticity of the peripheral stalk.
J.Mol.Biol., 420, 2012
5H29
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Crystal Structure of the NTD_N/C domain of Alkylhydroperoxide Reductase AhpF from Enterococcus Faecalis (V583)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PROLINE, SULFATE ION, ...
Authors:Balakrishna, A.M, Kwang, T.Y, Gruber, G.
Deposit date:2016-10-14
Release date:2017-11-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Novel insights into the vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F
Biochim. Biophys. Acta, 1861, 2017
3MFY
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Structural characterization of the subunit A mutant F236A of the A-ATP synthase from Pyrococcus horikoshii
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Balakrishna, A.M, Kumar, A, Manimekali, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2010-04-05
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The critical roles of residues P235 and F236 of subunit A of the motor protein A-ATP synthase in P-loop formation and nucleotide binding.
J.Mol.Biol., 401, 2010
4MJN
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Structure of the c ring of the CF1FO ATP synthases.
Descriptor: ATP synthase subunit c, chloroplastic
Authors:Balakrishna, A.M, Gruber, G.
Deposit date:2013-09-04
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (6 Å)
Cite:Crystallographic structure of the turbine C-ring from spinach chloroplast F-ATP synthase.
Biosci. Rep., 34, 2014
3FHV
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Structural basis of Salmonella typhi type IVb PilS and cystic fibrosis transmembrane conductance regulator (CFTR) interaction
Descriptor: Prepilin, cftr peptide
Authors:Balakrishna, A.M, Swaminathan, K.
Deposit date:2008-12-10
Release date:2009-10-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of typhoid: Salmonella typhi type IVb pilin (PilS) and cystic fibrosis transmembrane conductance regulator interaction.
Proteins, 77, 2009
3FHU
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Crystal structure of type IV b pilin from Salmonella typhi
Descriptor: Prepilin
Authors:Balakrishna, A.M, Swaminathan, K.
Deposit date:2008-12-10
Release date:2009-10-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of typhoid: Salmonella typhi type IVb pilin (PilS) and cystic fibrosis transmembrane conductance regulator interaction.
Proteins, 77, 2009
3LG8
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BU of 3lg8 by Molmil
Crystal structure of the C-terminal part of subunit E (E101-206) from Methanocaldococcus jannaschii of A1AO ATP synthase
Descriptor: A-type ATP synthase subunit E
Authors:Balakrishna, A.M, Manimekalai, M.S.S, Hunke, C, Gayen, S, Jeyakanthan, J, Gruber, G.
Deposit date:2010-01-19
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Crystal and solution structure of the C-terminal part of the Methanocaldococcus jannaschii A1AO ATP synthase subunit E revealed by X-ray diffraction and small-angle X-ray scattering
J.Bioenerg.Biomembr., 42, 2010
3PA7
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Crystal structure of FKBP from plasmodium vivax in complex with tetrapeptide ALPF
Descriptor: 4-mer Peptide ALPF, 70 kDa peptidylprolyl isomerase, putative
Authors:Balakrishna, A.M, Alag, R, Yoon, H.S.
Deposit date:2010-10-18
Release date:2012-02-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural insights into substrate binding by PvFKBP35, a peptidylprolyl cis-trans isomerase from the human malarial parasite Plasmodium vivax
EUKARYOTIC CELL, 12, 2013
5Y63
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Crystal structure of Enterococcus faecalis AhpC
Descriptor: Alkyl hydroperoxide reductase, C subunit
Authors:Pan, A, Balakrishna, A.M, Grueber, G.
Deposit date:2017-08-10
Release date:2017-12-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Atomic structure and enzymatic insights into the vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit C
Free Radic. Biol. Med., 115, 2017
6IL7
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Structure of Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) C503A mutant
Descriptor: SULFATE ION, Thioredoxin reductase/glutathione-related protein
Authors:Toh, Y.K, Shin, J, Balakrishna, A.M, Eisenhaber, F, Eisenhaber, B, Gruber, G.
Deposit date:2018-10-17
Release date:2019-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Effect of the additional cysteine 503 of vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) and the mechanism of AhpF and subunit C assembling.
Free Radic. Biol. Med., 138, 2019
3B2Q
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Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, ...
Authors:Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
Deposit date:2007-10-19
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
2RKW
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BU of 2rkw by Molmil
Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
Descriptor: V-type ATP synthase beta chain
Authors:Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
Deposit date:2007-10-18
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
5XNX
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BU of 5xnx by Molmil
Crystallographic structure of the enzymatically active N-terminal domain of the Rel protein from Mycobacterium tuberculosis
Descriptor: Bifunctional (p)ppGpp synthase/hydrolase RelA, MAGNESIUM ION
Authors:Singal, B, Balakrishna, A.M, Manimekalai, M.S.S, Nartey, W, Gruber, G.
Deposit date:2017-05-24
Release date:2017-07-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystallographic and solution structure of the N-terminal domain of the Rel protein from Mycobacterium tuberculosis
FEBS Lett., 591, 2017
5ID2
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BU of 5id2 by Molmil
Asymmetry in the active site of Mycobacterium tuberculosis AhpE upon exposure to Mycothiol
Descriptor: ACETATE ION, GLYCEROL, Putative peroxiredoxin Rv2238c
Authors:Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2016-02-23
Release date:2016-08-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Redox chemistry of Mycobacterium tuberculosis alkylhydroperoxide reductase E (AhpE): Structural and mechanistic insight into a mycoredoxin-1 independent reductive pathway of AhpE via mycothiol
Free Radic. Biol. Med., 97, 2016
3M4Y
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Structural characterization of the subunit A mutant P235A of the A-ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Manimekalai, M.S, Balakrishna, A.M, Kumar, A, Priya, R, Biukovic, G, Jeyakanthan, J, Gruber, G.
Deposit date:2010-03-12
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:The critical roles of residues P235 and F236 of subunit A of the motor protein A-ATP synthase in P-loop formation and nucleotide binding.
J.Mol.Biol., 401, 2010
4IX9
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Crystal structure of subunit F of V-ATPase from S. cerevisiae
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, V-type proton ATPase subunit F
Authors:Basak, S, Balakrishna, A.M, Manimekalai, M.S.S, Gruber, G.
Deposit date:2013-01-24
Release date:2013-03-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal and NMR structures give insights into the role and dynamics of subunit F of the eukaryotic V-ATPase from Saccharomyces cerevisiae
J.Biol.Chem., 288, 2013
3EIU
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A second transient position of ATP on its trail to the nucleotide-binding site of subunit B of the motor protein A1Ao ATP synthase
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ADENOSINE-5'-TRIPHOSPHATE, V-type ATP synthase beta chain
Authors:Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2008-09-17
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:A second transient position of ATP on its trail to the nucleotide-binding site of subunit B of the motor protein A(1)A(O) ATP synthase
J.Struct.Biol., 166, 2009
4O5Q
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Crystal Structure of the Alkylhydroperoxide Reductase AhpF from Escherichia coli
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alkyl hydroperoxide reductase subunit F, CADMIUM ION, ...
Authors:Dip, P.V, Kamariah, N, Manimekalai, M.S.S, Balakrishna, A.M, Gruber, G.
Deposit date:2013-12-20
Release date:2014-11-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, mechanism and ensemble formation of the alkylhydroperoxide reductase subunits AhpC and AhpF from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
3HGF
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Expression, purification, spectroscopical and crystallographical studies of segments of the nucleotide binding domain of the reticulocyte binding protein Py235 of Plasmodium yoelii
Descriptor: Rhoptry protein fragment
Authors:Gruber, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Jeyakanthan, J, Preiser, P.R, Gruber, G.
Deposit date:2009-05-13
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural determination of functional units of the nucleotide binding domain (NBD94) of the reticulocyte binding protein Py235 of Plasmodium yoelii
Plos One, 5, 2010
3I73
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Structural characterization for the nucleotide binding ability of subunit A with ADP of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, A-TYPE ATP SYNTHASE CATALYTIC SUBUNIT A, ...
Authors:Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2009-07-08
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.
J.Mol.Biol., 396, 2010
3IKJ
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BU of 3ikj by Molmil
Structural characterization for the nucleotide binding ability of subunit A mutant S238A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, V-type ATP synthase alpha chain
Authors:Kumar, A, Manimekali, M.S.S, Balakrishna, A.M, Jeyakanthan, J, Gruber, G.
Deposit date:2009-08-06
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.
J.Mol.Biol., 396, 2010
3I72
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Structural characterization for the nucleotide binding ability of subunit A with SO4 of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, A-TYPE ATP SYNTHASE CATALYTIC SUBUNIT A, ...
Authors:Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2009-07-07
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.
J.Mol.Biol., 396, 2010
3I4L
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BU of 3i4l by Molmil
Structural characterization for the nucleotide binding ability of subunit A with AMP-PNP of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, A-TYPE ATP SYNTHASE CATALYTIC SUBUNIT A, ...
Authors:Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Jeyakanthan, J, Gruber, G.
Deposit date:2009-07-01
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.
J.Mol.Biol., 396, 2010
3SDZ
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BU of 3sdz by Molmil
Structural characterization of the subunit A mutant F427W of the A-ATP synthase from Pyrococcus horikoshii
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Tadwal, V.S, Manimekalai, M.S.S, Balakrishna, A.M, Gruber, G.
Deposit date:2011-06-09
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Engineered tryptophan in the adenine-binding pocket of catalytic subunit A of A-ATP synthase demonstrates the importance of aromatic residues in adenine binding, forming a tool for steady-state and time-resolved fluorescence spectroscopy.
Acta Crystallogr.,Sect.F, 67, 2011

 

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