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PDB: 56 results

4TYP
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BU of 4typ by Molmil
Crystal structure of an adenylate kinase mutant--AKm1
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2014-07-09
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis
J KOREAN SOC APPL BIOL CHEM, 57, 2014
4TYQ
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BU of 4tyq by Molmil
Crystal structure of an adenylate kinase mutant--AKm2
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-07-09
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis
J KOREAN SOC APPL BIOL CHEM, 57, 2014
8HEK
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BU of 8hek by Molmil
Crystal Structure of Anti-CRISPR AcrIE2
Descriptor: AcrIE2
Authors:Koo, J, Ka, D, Bae, E.
Deposit date:2022-11-08
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Biochemical characterization of type I-E anti-CRISPR proteins, AcrIE2 and AcrIE4
Appl.Biol.Chem., 66, 2023
8HEL
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BU of 8hel by Molmil
Crystal Structure of Anti-CRISPR AcrIE3
Descriptor: AcrIE3
Authors:Koo, J, Bae, E.
Deposit date:2022-11-08
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.332 Å)
Cite:Crystal Structure of Anti-CRISPR AcrIE3
To Be Published
7VZM
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BU of 7vzm by Molmil
Anti-CRISPR AcrIE4-F7
Descriptor: AcrIE4-F7
Authors:Hong, S.H, Lee, G, Bae, E, Suh, J.Y.
Deposit date:2021-11-16
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of AcrIE4-F7 reveals a common strategy for dual CRISPR inhibition by targeting PAM recognition sites.
Nucleic Acids Res., 50, 2022
6PJW
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BU of 6pjw by Molmil
Adenylate kinase from Methanococcus igneus - AMP bound form
Descriptor: ADENOSINE MONOPHOSPHATE, Adenylate kinase, MAGNESIUM ION
Authors:Moon, S, Kim, J, Olmos, J.L, Bae, E, Phillips Jr, G.N.
Deposit date:2019-06-28
Release date:2020-01-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Adenylate kinase from Methanococcus igneus - AMP bound form
To Be Published
6PK5
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BU of 6pk5 by Molmil
Adenylate kinase from Methanococcus igneus - apo form
Descriptor: Adenylate kinase, CHLORIDE ION
Authors:Moon, S, Kim, J, Bae, E, Phillips Jr, G.N.
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Adenylate kinase from Methanococcus igneus - apo form
To Be Published
6PSP
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BU of 6psp by Molmil
Adenylate kinase from Methanococcus igneus - AP5A bound form
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Moon, S, Kim, J, Bae, E, Phillips Jr, G.N.
Deposit date:2019-07-13
Release date:2020-07-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Adenylate kinase from Methanococcus igneus - AMP bound form
To Be Published
5H1P
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BU of 5h1p by Molmil
CRISPR-associated protein
Descriptor: ACETATE ION, CRISPR-associated endoribonuclease Cas2
Authors:Ka, D, Jeong, U, Bae, E.
Deposit date:2016-10-11
Release date:2017-10-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity
Struct Dyn, 4, 2017
5H1O
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BU of 5h1o by Molmil
CRISPR-associated protein
Descriptor: ACETATE ION, CRISPR-associated endoribonuclease Cas2
Authors:Ka, D, Jeong, U, Bae, E.
Deposit date:2016-10-11
Release date:2017-10-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity
Struct Dyn, 4, 2017
2EXR
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BU of 2exr by Molmil
X-Ray Structure of Cytokinin Oxidase/Dehydrogenase (CKX) From Arabidopsis Thaliana AT5G21482
Descriptor: Cytokinin dehydrogenase 7, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Wesenberg, G.E, Phillips Jr, G.N, Han, B.W, Bitto, E, Bingman, C.A, Bae, E, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-11-08
Release date:2005-11-29
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Crystal structure of Arabidopsis thaliana cytokinin dehydrogenase.
Proteins, 70, 2008
6LKF
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BU of 6lkf by Molmil
Solution structure of Anti-CRISPR protein AcrIIA5
Descriptor: AcrIIA5
Authors:An, S.Y, Bae, E, Suh, J.Y.
Deposit date:2019-12-19
Release date:2020-06-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Intrinsic disorder is essential for Cas9 inhibition of anti-CRISPR AcrIIA5.
Nucleic Acids Res., 48, 2020
6M3N
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BU of 6m3n by Molmil
Solution structure of anti-CRISPR AcrIF7
Descriptor: anti-CRIPSR AcrIF7
Authors:Kim, I, An, S.Y, Koo, J, Bae, E, Suh, J.Y.
Deposit date:2020-03-04
Release date:2020-08-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and mechanistic insights into the CRISPR inhibition of AcrIF7.
Nucleic Acids Res., 48, 2020
4ZKJ
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BU of 4zkj by Molmil
Crystal structure of CRISPR-associated protein
Descriptor: CRISPR-associated protein Cas1, GLYCEROL
Authors:Ka, D, Bae, E.
Deposit date:2015-04-30
Release date:2016-01-13
Last modified:2016-01-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Streptococcus pyogenes Cas1 and Its Interaction with Csn2 in the Type II CRISPR-Cas System
Structure, 24, 2016
4QBI
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BU of 4qbi by Molmil
Crystal structure of a stable adenylate kinase variant AKlse6
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4QBG
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BU of 4qbg by Molmil
Crystal structure of a stable adenylate kinase variant AKlse4
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4QBH
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BU of 4qbh by Molmil
Crystal structure of a stable adenylate kinase variant AKlse5
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4QBF
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BU of 4qbf by Molmil
Crystal structure of a stable adenylate kinase variant AKlse2
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
5ZYF
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BU of 5zyf by Molmil
Crystal structure of Streptococcus pyogenes type II-A Cas2
Descriptor: 1,2-ETHANEDIOL, CRISPR-associated endoribonuclease Cas2, SULFATE ION
Authors:Ka, D, Bae, E.
Deposit date:2018-05-24
Release date:2018-08-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Molecular organization of the type II-A CRISPR adaptation module and its interaction with Cas9 via Csn2
Nucleic Acids Res., 46, 2018
5YHR
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BU of 5yhr by Molmil
Crystal structure of the anti-CRISPR protein, AcrF2
Descriptor: Anti-CRISPR protein 30, CALCIUM ION
Authors:Hong, S, Ka, D, Bae, E.
Deposit date:2017-09-29
Release date:2018-02-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:CRISPR RNA and anti-CRISPR protein binding to theXanthomonas albilineansCsy1-Csy2 heterodimer in the type I-F CRISPR-Cas system
J. Biol. Chem., 293, 2018
5X6I
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BU of 5x6i by Molmil
Crystal structure of B. subtilis adenylate kinase variant
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability.
Struct Dyn., 6, 2019
5XZ2
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BU of 5xz2 by Molmil
Crystal structure of adenylate kinase
Descriptor: Adenylate kinase isoenzyme 1, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, SULFATE ION
Authors:Moon, S, Bae, E, Kim, J.
Deposit date:2017-07-11
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural analyses of adenylate kinases from Antarctic and tropical fishes for understanding cold adaptation of enzymes
Sci Rep, 7, 2017
5X6K
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BU of 5x6k by Molmil
Crystal structure of adenylate kinase
Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, SULFATE ION, adenylate kinase isoenzyme 1
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural analyses of adenylate kinases from Antarctic and tropical fishes for understanding cold adaptation of enzymes
Sci Rep, 7, 2017
5Y69
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BU of 5y69 by Molmil
Crystal structure of the L52M mutant of AcrIIA1
Descriptor: chain A
Authors:Ka, D, An, S.Y, Suh, J.Y, Bae, E.
Deposit date:2017-08-11
Release date:2017-11-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of an anti-CRISPR protein, AcrIIA1.
Nucleic Acids Res., 46, 2018
5X6J
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BU of 5x6j by Molmil
Crystal structure of B. globisporus adenylate kinase variant
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability.
Struct Dyn., 6, 2019

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