Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 82 results

2W31
DownloadVisualize
BU of 2w31 by Molmil
globin domain of Geobacter sulfurreducens globin-coupled sensor
Descriptor: GLOBIN, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pesce, A, Thijs, L, Nardini, M, Desmet, F, Sisinni, L, Gourlay, L, Bolli, A, Coletta, M, Van Doorslaer, S, Wan, X, Alam, M, Ascenzi, P, Moens, L, Bolognesi, M, Dewilde, S.
Deposit date:2008-11-05
Release date:2009-01-13
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hise11 and Hisf8 Provide Bis-Histidyl Heme Hexa-Coordination in the Globin Domain of Geobacter Sulfurreducens Globin-Coupled Sensor.
J.Mol.Biol., 386, 2009
1IDR
DownloadVisualize
BU of 1idr by Molmil
CRYSTAL STRUCTURE OF THE TRUNCATED-HEMOGLOBIN-N FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor: HEMOGLOBIN HBN, OXYGEN MOLECULE, PHOSPHATE ION, ...
Authors:Milani, M, Pesce, A, Ascenzi, P, Guertin, M, Bolognesi, M.
Deposit date:2001-04-05
Release date:2001-08-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mycobacterium tuberculosis hemoglobin N displays a protein tunnel suited for O2 diffusion to the heme.
EMBO J., 20, 2001
2G3H
DownloadVisualize
BU of 2g3h by Molmil
Cyanide Binding and Heme Cavity Conformational Transitions in Drosophila melanogaster Hexa-coordinate Hemoglobin
Descriptor: CHLORIDE ION, CYANIDE ION, MAGNESIUM ION, ...
Authors:de Sanctis, D, Ascenzi, P, Bocedi, A, Dewilde, S, Burmester, T, Hankeln, T, Moens, L, Bolognesi, M.
Deposit date:2006-02-20
Release date:2006-10-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Cyanide binding and heme cavity conformational transitions in Drosophila melanogaster hexacoordinate hemoglobin.
Biochemistry, 45, 2006
2IG3
DownloadVisualize
BU of 2ig3 by Molmil
Crystal structure of group III truncated hemoglobin from Campylobacter jejuni
Descriptor: ACETATE ION, CYANIDE ION, Group III truncated haemoglobin, ...
Authors:Nardini, M, Pesce, A, Labarre, M, Ascenzi, P, Guertin, M, Bolognesi, M.
Deposit date:2006-09-22
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural determinants in the group III truncated hemoglobin from Campylobacter jejuni.
J.Biol.Chem., 281, 2006
1UMA
DownloadVisualize
BU of 1uma by Molmil
ALPHA-THROMBIN (HIRUGEN) COMPLEXED WITH NA-(N,N-DIMETHYLCARBAMOYL)-ALPHA-AZALYSINE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN, HIRUDIN I, ...
Authors:Nardini, M, Pesce, A, Rizzi, M, Casale, E, Ferraccioli, R, Balliano, G, Milla, P, Ascenzi, P, Bolognesi, M.
Deposit date:1996-03-26
Release date:1996-11-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human alpha-thrombin inhibition by the active site titrant N alpha-(N,N-dimethylcarbamoyl)-alpha-azalysine p-nitrophenyl ester: a comparative kinetic and X-ray crystallographic study.
J.Mol.Biol., 258, 1996
1FLP
DownloadVisualize
BU of 1flp by Molmil
STRUCTURE OF THE SULFIDE-REACTIVE HEMOGLOBIN FROM THE CLAM LUCINA PECTINATA: CRYSTALLOGRAPHIC ANALYSIS AT 1.5 ANGSTROMS RESOLUTION
Descriptor: HEMOGLOBIN I (AQUO MET), PROTOPORPHYRIN IX CONTAINING FE
Authors:Rizzi, M, Wittenberg, J.B, Ascenzi, P, Fasano, M, Coda, A, Bolognesi, M.
Deposit date:1994-05-16
Release date:1994-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the sulfide-reactive hemoglobin from the clam Lucina pectinata. Crystallographic analysis at 1.5 A resolution.
J.Mol.Biol., 244, 1994
1B5Q
DownloadVisualize
BU of 1b5q by Molmil
A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, N,N'-BIS(2,3-BUTADIENYL)-1,4-BUTANE-DIAMINE, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:1999-01-07
Release date:2000-01-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999
1B0B
DownloadVisualize
BU of 1b0b by Molmil
HEMOGLOBIN I FROM THE CLAM LUCINA PECTINATA, CYANIDE COMPLEX AT 100 KELVIN
Descriptor: CYANIDE ION, HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Rosano, C, Rizzi, M, Ascenzi, P, Bolognesi, M.
Deposit date:1998-11-06
Release date:2000-02-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Cyanide binding to Lucina pectinata hemoglobin I and to sperm whale myoglobin: an x-ray crystallographic study.
Biophys.J., 77, 1999
1B37
DownloadVisualize
BU of 1b37 by Molmil
A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (POLYAMINE OXIDASE), ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:1998-12-17
Release date:1999-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999
1NGK
DownloadVisualize
BU of 1ngk by Molmil
Crystallographic Structure of Mycobacterium tuberculosis Hemoglobin O
Descriptor: CYANIDE ION, Hemoglobin-like protein HbO, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Milani, M, Savard, P.-Y, Oullet, H, Ascenzi, P, Guertin, M, Bolognesi, M.
Deposit date:2002-12-17
Release date:2003-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:A TyrCD1/TrpG8 hydrogen bond network and a TyrB10-TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O
Proc.Natl.Acad.Sci.USA, 100, 2003
1MTN
DownloadVisualize
BU of 1mtn by Molmil
BOVINE ALPHA-CHYMOTRYPSIN:BPTI CRYSTALLIZATION
Descriptor: ALPHA-CHYMOTRYPSIN, BASIC PANCREATIC TRYPSIN INHIBITOR, SULFATE ION
Authors:Capasso, C, Rizzi, M, Menegatti, E, Ascenzi, P, Bolognesi, M.
Deposit date:1996-03-28
Release date:1996-08-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the bovine alpha-chymotrypsin:Kunitz inhibitor complex. An example of multiple protein:protein recognition sites.
J.Mol.Recog., 10, 1997
1OJ6
DownloadVisualize
BU of 1oj6 by Molmil
Human brain neuroglobin three-dimensional structure
Descriptor: Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pesce, A, Dewilde, S, Nardini, M, Moens, L, Ascenzi, P, Hankeln, T, Burmester, T, Bolognesi, M.
Deposit date:2003-07-03
Release date:2003-09-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Human Brain Neuroglobin Structure Reveals a Distinct Mode of Controlling Oxygen Affinity
Structure, 11, 2003
1NXN
DownloadVisualize
BU of 1nxn by Molmil
SOLUTION STRUCTURE OF CONTRYPHAN-VN
Descriptor: CONTRYPHAN-VN, MAJOR FORM (CIS CONFORMER)
Authors:Eliseo, T, Cicero, D.O, Polticelli, F, Schinina, M.E, Massilia, G.R, Paci, M, Ascenzi, P.
Deposit date:2003-02-11
Release date:2003-03-04
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of the cyclic peptide contryphan-Vn, a Ca2+-dependent K+ channel modulator
Biopolymers, 74, 2004
1H97
DownloadVisualize
BU of 1h97 by Molmil
Trematode hemoglobin from Paramphistomum epiclitum
Descriptor: Globin-3, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pesce, A, Dewilde, S, Kiger, L, Milani, M, Ascenzi, P, Marden, M.C, Van Hauwaert, M.L, Vanfleteren, J, Moens, L, Bolognesi, M.
Deposit date:2001-03-02
Release date:2001-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Very High Resolution Structure of a Trematode Hemoglobin Displaying a Tyrb10-Tyre7 Heme Distal Residue Pair and High Oxygen Affinity
J.Mol.Biol., 309, 2001
1V07
DownloadVisualize
BU of 1v07 by Molmil
CRYSTAL STRUCTURE OF ThrE11Val mutant of THE NERVE TISSUE MINI-HEMOGLOBIN FROM THE NEMERTEAN WORM CEREBRATULUS LACTEUS
Descriptor: NEURAL HEMOGLOBIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pesce, A, Nardini, M, Ascenzi, P, Geuens, E, Dewilde, S, Moens, L, Bolognesi, M, Riggs, A, Hale, A, Deng, P, Nienhaus, G.U, Olson, J.S, Nienhaus, K.
Deposit date:2004-03-24
Release date:2004-06-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Thr-E11 Regulates O2 Affinity in Cerebratulus Lacteus Mini-Hemoglobin
J.Biol.Chem., 279, 2004
1EBT
DownloadVisualize
BU of 1ebt by Molmil
HEMOGLOBIN I FROM THE CLAM LUCINA PECTINATA BOUND WITH CYANIDE
Descriptor: CYANIDE ION, HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Rosano, C, Bolognesi, M, Ascenzi, P.
Deposit date:1998-11-04
Release date:2000-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cyanide binding to Lucina pectinata hemoglobin I and to sperm whale myoglobin: an x-ray crystallographic study.
Biophys.J., 77, 1999
1EBC
DownloadVisualize
BU of 1ebc by Molmil
SPERM WHALE MET-MYOGLOBIN:CYANIDE COMPLEX
Descriptor: CYANIDE ION, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Rosano, C, Ascenzi, P, Rizzi, M, Losso, R, Bolognesi, M.
Deposit date:1999-03-04
Release date:1999-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cyanide binding to Lucina pectinata hemoglobin I and to sperm whale myoglobin: an x-ray crystallographic study.
Biophys.J., 77, 1999
1H86
DownloadVisualize
BU of 1h86 by Molmil
COVALENT ADDUCT BETWEEN POLYAMINE OXIDASE AND N1ethylN11((cycloheptyl)methyl)4,8diazaundecane at pH 7.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(3-{[3-(METHYLAMINO)PROPYL]AMINO}PROPYL)AMINO]PROPANE-1,1-DIOL, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:2001-01-24
Release date:2001-01-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Bases for Inhibitor Binding and Catalysis in Polyamine Oxidase
Biochemistry, 40, 2001
1H82
DownloadVisualize
BU of 1h82 by Molmil
STRUCTURE OF POLYAMINE OXIDASE IN COMPLEX WITH GUAZATINE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, N-{8-[(8-{[(E)-AMINO(IMINO)METHYL]AMINO}OCTYL)AMINO]OCTYL}GUANIDINE, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:2001-01-24
Release date:2001-01-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Bases for Inhibitor Binding and Catalysis in Polyamine Oxidase
Biochemistry, 40, 2001
1H83
DownloadVisualize
BU of 1h83 by Molmil
STRUCTURE OF POLYAMINE OXIDASE IN COMPLEX WITH 1,8-DIAMINOOCTANE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, OCTANE 1,8-DIAMINE, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:2001-01-24
Release date:2001-01-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Bases for Inhibitor Binding and Catalysis in Polyamine Oxidase
Biochemistry, 40, 2001
1H84
DownloadVisualize
BU of 1h84 by Molmil
COVALENT ADDUCT BETWEEN POLYAMINE OXIDASE AND N1ethylN11((cycloheptyl)methyl)4,8diazaundecane at pH 4.6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(3-{[3-(METHYLAMINO)PROPYL]AMINO}PROPYL)AMINO]PROPANE-1,1-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:2001-01-24
Release date:2001-01-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Bases for Inhibitor Binding and Catalysis in Polyamine Oxidase
Biochemistry, 40, 2001
1H81
DownloadVisualize
BU of 1h81 by Molmil
STRUCTURE OF POLYAMINE OXIDASE IN THE REDUCED STATE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, POLYAMINE OXIDASE, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:2001-01-24
Release date:2001-01-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Bases for Inhibitor Binding and Catalysis in Polyamine Oxidase
Biochemistry, 40, 2001
1S56
DownloadVisualize
BU of 1s56 by Molmil
Crystal Structure of "Truncated" Hemoglobin N (HbN) from Mycobacterium tuberculosis, Soaked with Xe Atoms
Descriptor: CYANIDE ION, HEME C, Hemoglobin-like protein HbN, ...
Authors:Milani, M, Pesce, A, Ouellet, Y, Dewilde, S, Friedman, J, Ascenzi, P, Guertin, M, Bolognesi, M.
Deposit date:2004-01-20
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Heme-ligand tunneling in group I truncated hemoglobins
J.Biol.Chem., 279, 2004
1S61
DownloadVisualize
BU of 1s61 by Molmil
Crystal Structure of "Truncated" Hemoglobin N (HbN) from Mycobacterium tuberculosis, Soaked with Butyl-isocyanide
Descriptor: CYANIDE ION, Hemoglobin-like protein HbN, N-BUTYL ISOCYANIDE, ...
Authors:Milani, M, Pesce, A, Ouellet, Y, Dewilde, S, Friedman, J, Ascenzi, P, Guertin, M, Bolognesi, M.
Deposit date:2004-01-22
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heme-ligand tunneling in group I truncated hemoglobins
J.Biol.Chem., 279, 2004
1UMO
DownloadVisualize
BU of 1umo by Molmil
The crystal structure of cytoglobin: the fourth globin type discovered in man
Descriptor: CYTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:de Sanctis, D, Dewilde, S, Pesce, A, Moens, L, Ascenzi, P, Hankeln, T, Burmester, T, Bolognesi, M.
Deposit date:2003-08-26
Release date:2004-09-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of cytoglobin: the fourth globin type discovered in man displays heme hexa-coordination.
J.Mol.Biol., 336, 2004

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon