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PDB: 78 件
3ZUC
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BU of 3zuc by Molmil
Structure of CBM3b of major scaffoldin subunit ScaA from Acetivibrio cellulolyticus determined from the crystals grown in the presence of Nickel
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CELLULOSOMAL SCAFFOLDIN, ...
著者Yaniv, O, Halfon, Y, Lamed, R, Frolow, F.
登録日2011-07-18
公開日2012-01-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.001 Å)
主引用文献Structure of Cbm3B of the Major Scaffoldin Subunit Scaa from Acetivibrio Cellulolyticus
Acta Crystallogr.,Sect.F, 68, 2012
3ZQW
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Structure of CBM3b of major scaffoldin subunit ScaA from Acetivibrio cellulolyticus
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CELLULOSOMAL SCAFFOLDIN, ...
著者Yaniv, O, Halfon, Y, Lamed, R, Frolow, F.
登録日2011-06-12
公開日2012-01-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Structure of Cbm3B of the Major Scaffoldin Subunit Scaa from Acetivibrio Cellulolyticus
Acta Crystallogr.,Sect.F, 68, 2012
6S9A
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BU of 6s9a by Molmil
Artificial GTPase-BSE dimer of human Dynamin1
分子名称: CHLORIDE ION, Dynamin-1,Dynamin-1, ZINC ION
著者Ganichkin, O.M, Vancraenenbroeck, R, Rosenblum, G, Hofmann, H, Daumke, O, Noel, J.K.
登録日2019-07-11
公開日2020-08-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Quantification and demonstration of the collective constriction-by-ratchet mechanism in the dynamin molecular motor.
Proc.Natl.Acad.Sci.USA, 118, 2021
6TEO
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BU of 6teo by Molmil
Crystal structure of a yeast Snu114-Prp8 complex
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor 8, ...
著者Ganichkin, O, Jia, J, Loll, B, Absmeier, E, Wahl, M.C.
登録日2019-11-12
公開日2020-03-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A Snu114-GTP-Prp8 module forms a relay station for efficient splicing in yeast.
Nucleic Acids Res., 48, 2020
7OFV
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BU of 7ofv by Molmil
NMR-guided design of potent and selective EphA4 agonistic ligands
分子名称: ACETATE ION, EphA4 agonist ligand, Ephrin type-A receptor 4
著者Ganichkin, O.M, Craig, T.K, Baggio, C, Pellecchia, M.
登録日2021-05-05
公開日2021-08-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献NMR-Guided Design of Potent and Selective EphA4 Agonistic Ligands.
J.Med.Chem., 64, 2021
7S25
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BU of 7s25 by Molmil
ROCK1 IN COMPLEX WITH LIGAND G4998
分子名称: 2-[3-(methoxymethyl)phenyl]-N-[4-(1H-pyrazol-4-yl)phenyl]acetamide, CHLORIDE ION, Rho-associated protein kinase 1
著者Ganichkin, O, Harris, S.F, Steinbacher, S.
登録日2021-09-03
公開日2022-10-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.337 Å)
主引用文献Chemical space docking enables large-scale structure-based virtual screening to discover ROCK1 kinase inhibitors.
Nat Commun, 13, 2022
7S26
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BU of 7s26 by Molmil
ROCK1 IN COMPLEX WITH LIGAND G5018
分子名称: 2-[methyl(phenyl)amino]-1-[4-(1H-pyrrolo[2,3-b]pyridin-3-yl)-3,6-dihydropyridin-1(2H)-yl]ethan-1-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Rho-associated protein kinase 1
著者Ganichkin, O, Harris, S.F, Steinbacher, S.
登録日2021-09-03
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.744 Å)
主引用文献Chemical space docking enables large-scale structure-based virtual screening to discover ROCK1 kinase inhibitors.
Nat Commun, 13, 2022
2V9V
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BU of 2v9v by Molmil
Crystal Structure of Moorella thermoacetica SelB(377-511)
分子名称: CHLORIDE ION, SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR, SODIUM ION
著者Ganichkin, O, Wahl, M.C.
登録日2007-08-27
公開日2007-09-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Conformational Switches in Winged-Helix Domains 1 and 2 of Bacterial Translation Elongation Factor Selb.
Acta Crystallogr.,Sect.D, 63, 2007
3ZQX
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BU of 3zqx by Molmil
Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
分子名称: CALCIUM ION, CELLULOSE 1,4-BETA-CELLOBIOSIDASE
著者Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2011-06-12
公開日2012-04-25
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module
Acta Crystallogr.,Sect.D, 68, 2012
3ZU8
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BU of 3zu8 by Molmil
STRUCTURE OF CBM3B OF MAJOR SCAFFOLDIN SUBUNIT SCAA FROM ACETIVIBRIO CELLULOLYTICUS DETERMINED ON THE NIKEL ABSORPTION EDGE
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CELLULOSOMAL SCAFFOLDIN, ...
著者Yaniv, O, Halfon, Y, Lamed, R, Frolow, F.
登録日2011-07-17
公開日2012-01-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structure of Cbm3B of the Major Scaffoldin Subunit Scaa from Acetivibrio Cellulolyticus
Acta Crystallogr.,Sect.F, 68, 2012
4B9P
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BU of 4b9p by Molmil
Biomass sensoring module from putative Rsgi2 protein of Clostridium thermocellum resemble family 3 carbohydrate-binding module of cellulosome
分子名称: CALCIUM ION, TYPE 3A CELLULOSE-BINDING DOMAIN PROTEIN, ZINC ION
著者Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2012-09-06
公開日2013-09-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.182 Å)
主引用文献Fine-Structural Variance of Family 3 Carbohydrate-Binding Modules as Extracellular Biomass-Sensing Components of Clostridium Thermocellum Anti-Sigma(I) Factors.
Acta Crystallogr.,Sect.D, 70, 2014
4B96
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BU of 4b96 by Molmil
Family 3b carbohydrate-binding module from the biomass sensoring system of Clostridium clariflavum
分子名称: CALCIUM ION, CELLULOSE BINDING DOMAIN-CONTAINING PROTEIN, CHLORIDE ION
著者Yaniv, O, Reddy, Y.H.K, Yoffe, H, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2012-09-02
公開日2013-09-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.911 Å)
主引用文献Structure of Cbm3B from the Biomass Sensoring System of Clostridium Clarifalvum
To be Published
4C8X
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BU of 4c8x by Molmil
Crystal structure of carbohydrate-binding module CBM3b mutant (Y56S) from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
分子名称: CELLULOSE 1,4-BETA-CELLOBIOSIDASE
著者Yaniv, O, Bayer, E.A, Lamed, R, Frolow, F.
登録日2013-10-02
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Crystal Structure of Carbohydrate-Binding Module Cbm3B Mutant (Y56S) from the Cellulosomal Cellobiohydrolase 9A from Clostridium Thermocellum
To be Published
4B97
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BU of 4b97 by Molmil
Biomass sensing modules from putative Rsgi-like proteins of Clostridium thermocellum resemble family 3 carbohydrate-binding module of cellulosome
分子名称: CALCIUM ION, CELLULOSE BINDING DOMAIN-CONTAINING PROTEIN
著者Yaniv, O, Fichman, G, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2012-09-03
公開日2013-09-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.276 Å)
主引用文献Fine-Structural Variance of Family 3 Carbohydrate-Binding Modules as Extracellular Biomass-Sensing Components of Clostridium Thermocellum Anti-Sigma(I) Factors.
Acta Crystallogr.,Sect.D, 70, 2014
4B9F
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BU of 4b9f by Molmil
High resolution structure for family 3a carbohydrate binding module from the cipA scaffolding of clostridium thermocellum
分子名称: CALCIUM ION, CELLULOSOMAL-SCAFFOLDING PROTEIN A, SULFATE ION
著者Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2012-09-04
公開日2012-09-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献High Resolution Structure of the Family 3A Carbohydrate-Binding Module from the Mafor Scaffoldin Subunit Cipa of Clostridium Thermocellum
To be Published
4B9C
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BU of 4b9c by Molmil
Biomass sensoring modules from putative Rsgi-like proteins of Clostridium thermocellum resemble family 3 carbohydrate-binding module of cellulosome
分子名称: CALCIUM ION, TYPE 3A CELLULOSE-BINDING DOMAIN PROTEIN
著者Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2012-09-04
公開日2013-09-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.171 Å)
主引用文献Fine-Structural Variance of Family 3 Carbohydrate-Binding Modules as Extracellular Biomass-Sensing Components of Clostridium Thermocellum Anti-Sigma(I) Factors.
Acta Crystallogr.,Sect.D, 70, 2014
2YLK
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BU of 2ylk by Molmil
Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
分子名称: CELLULOSE 1,4-BETA-CELLOBIOSIDASE
著者Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2011-06-02
公開日2012-04-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module
Acta Crystallogr.,Sect.D, 68, 2012
2XBT
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BU of 2xbt by Molmil
Structure of a scaffoldin carbohydrate-binding module family 3b from the cellulosome of Bacteroides cellulosolvens: Structural diversity and implications for carbohydrate binding
分子名称: CELLULOSOMAL SCAFFOLDIN, NITRATE ION
著者Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2010-04-15
公開日2011-04-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.832 Å)
主引用文献Scaffoldin-Borne Family 3B Carbohydrate-Binding Module from the Cellulosome of Bacteroides Cellulosolvens: Structural Diversity and Significance of Calcium for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 67, 2011
3BC8
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BU of 3bc8 by Molmil
Crystal structure of mouse selenocysteine synthase
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, O-phosphoseryl-tRNA(Sec) selenium transferase
著者Ganichkin, O.M, Wahl, M.C.
登録日2007-11-12
公開日2007-12-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and catalytic mechanism of eukaryotic selenocysteine synthase.
J.Biol.Chem., 283, 2008
3BCA
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BU of 3bca by Molmil
Crystal structure of mouse selenocysteine synthase, sodium iodide soak
分子名称: IODIDE ION, O-phosphoseryl-tRNA(Sec) selenium transferase
著者Ganichkin, O.M, Wahl, M.C.
登録日2007-11-12
公開日2007-12-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and catalytic mechanism of eukaryotic selenocysteine synthase.
J.Biol.Chem., 283, 2008
3BCB
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BU of 3bcb by Molmil
Crystal structure of mouse selenocysteine synthase, sodium phosphate soak
分子名称: CHLORIDE ION, O-phosphoseryl-tRNA(Sec) selenium transferase, PHOSPHATE ION
著者Ganichkin, O.M, Wahl, M.C.
登録日2007-11-12
公開日2007-12-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and catalytic mechanism of eukaryotic selenocysteine synthase.
J.Biol.Chem., 283, 2008
8ERX
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BU of 8erx by Molmil
Structure of chimeric HLA-A*11:01-A*02:01 bound to HIV-1 RT peptide
分子名称: Beta-2-microglobulin, HIV-1 RT, HLA-A*02:01
著者Florio, T.J, Ani, O, Young, M.C, Mallik, L, Sgourakis, N.G.
登録日2022-10-13
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules.
Front Immunol, 14, 2023
8ESH
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BU of 8esh by Molmil
Structure of chimeric HLA-A*02:01 bound to CMV peptide
分子名称: Beta-2-microglobulin, CMV peptide, HLA-A*02:01
著者Florio, T.J, Ani, O, Young, M.C, Mallik, L, Sgourakis, N.G.
登録日2022-10-14
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules.
Front Immunol, 14, 2023
2POQ
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BU of 2poq by Molmil
Dimeric Dihydrodiol Dehydrogenase complexed with inhibitor, Isoascorbic acid
分子名称: BETA-MERCAPTOETHANOL, Dimeric dihydrodiol dehydrogenase, ISOASCORBIC ACID, ...
著者Carbone, V, El-Kabbani, O.
登録日2007-04-27
公開日2007-07-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Structure of monkey dimeric dihydrodiol dehydrogenase in complex with isoascorbic acid.
Acta Crystallogr.,Sect.D, 64, 2008
3C3U
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BU of 3c3u by Molmil
Crystal structure of AKR1C1 in complex with NADP and 3,5-dichlorosalicylic acid
分子名称: 3,5-dichloro-2-hydroxybenzoic acid, Aldo-keto reductase family 1 member C1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Dhagat, U, El-Kabbani, O.
登録日2008-01-28
公開日2008-08-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Selectivity determinants of inhibitor binding to human 20alpha-hydroxysteroid dehydrogenase: crystal structure of the enzyme in ternary complex with coenzyme and the potent inhibitor 3,5-dichlorosalicylic acid
J.Med.Chem., 51, 2008

 

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