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PDB: 4123 results

4GF6
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BU of 4gf6 by Molmil
crystal structure of GFP with cuprum bound at the Incorporated metal Chelating Amino Acid PYZ151
Descriptor: CALCIUM ION, COPPER (II) ION, green fluorescent protein
Authors:Dong, J, Liu, X, Li, J, Wang, J, Gong, W.
Deposit date:2012-08-03
Release date:2012-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Genetic incorporation of a metal-chelating amino Acid as a probe for protein electron transfer.
Angew.Chem.Int.Ed.Engl., 51, 2012
5XVC
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BU of 5xvc by Molmil
[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in a ferricyanide-oxidized condition
Descriptor: DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, FE4-S4-O CLUSTER, ...
Authors:Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
Deposit date:2017-06-27
Release date:2018-06-27
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
7WU1
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BU of 7wu1 by Molmil
Crystal structure of phospholipase D from Moritella sp. JT01
Descriptor: 1,2-ETHANEDIOL, Phospholipase D, SODIUM ION
Authors:Wang, Y.H, Mao, X.J, Wang, J, Wang, F.H.
Deposit date:2022-02-05
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of phospholipase D from Moritella sp. JT01
To Be Published
7XDR
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BU of 7xdr by Molmil
Crystal structure of a glucosylglycerol phosphorylase from Marinobacter adhaerens
Descriptor: Glucosylglycerol phosphorylase
Authors:Wei, H.L, Li, Q, Yang, J.G, Liu, W.D, Sun, Y.X.
Deposit date:2022-03-28
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Protein Engineering of Glucosylglycerol Phosphorylase Facilitating Efficient and Highly Regio- and Stereoselective Glycosylation of Polyols in a Synthetic System.
Acs Catalysis, 2022
2IGH
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BU of 2igh by Molmil
DETERMINATION OF THE SOLUTION STRUCTURES OF DOMAINS II AND III OF PROTEIN G FROM STREPTOCOCCUS BY 1H NMR
Descriptor: PROTEIN G
Authors:Lian, L.-Y, Derrick, J.P, Sutcliffe, M.J, Yang, J.C, Roberts, G.C.K.
Deposit date:1992-08-26
Release date:1994-01-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Determination of the solution structures of domains II and III of protein G from Streptococcus by 1H nuclear magnetic resonance.
J.Mol.Biol., 228, 1992
2IGG
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BU of 2igg by Molmil
DETERMINATION OF THE SOLUTION STRUCTURES OF DOMAINS II AND III OF PROTEIN G FROM STREPTOCOCCUS BY 1H NMR
Descriptor: PROTEIN G
Authors:Lian, L.-Y, Derrick, J.P, Sutcliffe, M.J, Yang, J.C, Roberts, G.C.K.
Deposit date:1992-08-26
Release date:1994-01-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Determination of the solution structures of domains II and III of protein G from Streptococcus by 1H nuclear magnetic resonance.
J.Mol.Biol., 228, 1992
8AY2
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BU of 8ay2 by Molmil
Crystal structure of the C-terminal part of rat Sec8
Descriptor: Exocyst complex component 4
Authors:Dong, G, Lesigang, J.
Deposit date:2022-09-01
Release date:2023-09-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sec8 specifically interacts with the PDZ2 domain of synapse associated protein 102 (SAP102).
Front Cell Dev Biol, 11, 2023
5KWW
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BU of 5kww by Molmil
Crystal Structure of Inhibitor JNJ-53718678 In Complex with Prefusion RSV F Glycoprotein
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[[5-chloranyl-1-(3-methylsulfonylpropyl)indol-2-yl]methyl]-1-[2,2,2-tris(fluoranyl)ethyl]imidazo[4,5-c]pyridin-2-one, ...
Authors:McLellan, J.S, Battles, M.B, Arnoult, E, Roymans, D, Langedijk, J.P.
Deposit date:2016-07-19
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Therapeutic efficacy of a respiratory syncytial virus fusion inhibitor.
Nat Commun, 8, 2017
6AYE
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BU of 6aye by Molmil
Human apo-TRPML3 channel at pH 7.4
Descriptor: Mucolipin-3
Authors:Zhou, X, Li, M, Su, D, Jia, Q, Li, H, Li, X, Yang, J.
Deposit date:2017-09-08
Release date:2017-11-08
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.06 Å)
Cite:Cryo-EM structures of the human endolysosomal TRPML3 channel in three distinct states.
Nat. Struct. Mol. Biol., 24, 2017
4OI8
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BU of 4oi8 by Molmil
RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA.
Descriptor: 5'-D(*CP*CP*AP*TP*GP*AP*CP*TP*GP*TP*AP*GP*GP*AP*AP*AP*CP*TP*CP*TP*AP*GP*A)-3', 5'-D(*CP*TP*CP*TP*AP*GP*AP*GP*TP*TP*TP*CP*CP*TP*AP*CP*AP*GP*TP*CP*AP*TP*G)-3', Advanced glycosylation end product-specific receptor
Authors:Jin, T, Jiang, J, Xiao, T.
Deposit date:2014-01-19
Release date:2014-04-30
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA.
J.Exp.Med., 210, 2013
4DNW
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BU of 4dnw by Molmil
Crystal structure of UVB-resistance protein UVR8
Descriptor: AT5g63860/MGI19_6
Authors:Wu, D, Hu, Q, Yan, Z, Chen, W, Yan, C, Wang, J, Shi, Y.
Deposit date:2012-02-09
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.773 Å)
Cite:Structural basis of ultraviolet-B perception by UVR8.
Nature, 484, 2012
4OK0
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BU of 4ok0 by Molmil
Crystal structure of putative nucleotidyltransferase from H. pylori
Descriptor: Putative
Authors:Yoon, J.Y, Lee, S.J, Lee, B, Yang, J.K, Suh, S.W.
Deposit date:2014-01-21
Release date:2014-04-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of JHP933 from Helicobacter pylori J99 shows two-domain architecture with a DUF1814 family nucleotidyltransferase domain and a helical bundle domain.
Proteins, 82, 2014
7X7H
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BU of 7x7h by Molmil
Crystal structure of Fructose regulator/Histidine phosphocarrier protein complex from Vibrio cholerae
Descriptor: CALCIUM ION, Catabolite repressor/activator, HPr family phosphocarrier protein
Authors:Kim, M.-K, Zhang, J, Yoon, C.-K, Seok, Y.-J.
Deposit date:2022-03-09
Release date:2023-03-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:HPr prevents FruR-mediated facilitation of RNA polymerase binding to the fru promoter in Vibrio cholerae.
Nucleic Acids Res., 51, 2023
5XR6
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BU of 5xr6 by Molmil
Crystal structure of RabA1a in complex with GppNHp
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein RABA1a
Authors:Yun, J.S, Chang, J.H.
Deposit date:2017-06-07
Release date:2018-06-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure and subcellular localization of RabA1a from Arabidopsis thaliana
To Be Published
3PXI
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BU of 3pxi by Molmil
Structure of MecA108:ClpC
Descriptor: Adapter protein mecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G.
Deposit date:2010-12-09
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (6.926 Å)
Cite:Structure and mechanism of the hexameric MecA-ClpC molecular machine.
Nature, 471, 2011
5XVB
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BU of 5xvb by Molmil
[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an H2-reduced condition
Descriptor: FE3-S4 CLUSTER, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
Deposit date:2017-06-27
Release date:2018-06-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
5XVD
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BU of 5xvd by Molmil
[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an air-oxidized condition
Descriptor: FE3-S4 CLUSTER, FE4-S4-O CLUSTER, GLYCEROL, ...
Authors:Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
Deposit date:2017-06-27
Release date:2018-06-27
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
4OR9
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BU of 4or9 by Molmil
Crystal structure of human calcineurin
Descriptor: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
Authors:Li, S.J, Wang, J, Wu, J.W, Wang, Z.X.
Deposit date:2014-02-11
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Cooperative autoinhibition and multi-level activation mechanisms of calcineurin
To be Published
3V6T
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BU of 3v6t by Molmil
Crystal structure of the DNA-bound dHax3, a TAL effector, at 1.85 angstrom
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), dHax3
Authors:Deng, D, Yan, C.Y, Pan, X.J, Wang, J.W, Yan, N, Shi, Y.G.
Deposit date:2011-12-20
Release date:2012-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors
Science, 2012
7DYS
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BU of 7dys by Molmil
CryoEM structure of full length mouse TRPML2
Descriptor: Mucolipin-2
Authors:Song, X.J, Li, J, Duan, J.J, Zhang, J.
Deposit date:2021-01-22
Release date:2022-03-23
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Cryo-EM structure of mouse TRPML2 in lipid nanodiscs.
J.Biol.Chem., 298, 2022
3VBS
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BU of 3vbs by Molmil
Crystal structure of human Enterovirus 71
Descriptor: Genome Polyprotein, capsid protein VP1, capsid protein VP2, ...
Authors:Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
Deposit date:2012-01-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
4IXL
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BU of 4ixl by Molmil
Crystal structure of endo-beta-1,4-xylanase from the alkaliphilic Bacillus sp. SN5
Descriptor: SULFATE ION, xylanase
Authors:Bai, W.Q, Xue, Y.F, Huang, J.X, Zhou, C, Guo, R.T, Ma, Y.H.
Deposit date:2013-01-26
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure Analysis of Alkaline xylanase from Alkaliphilic Bacillus sp. SN5 Implications for pH-dependent enzyme activity
To be Published
7DVM
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BU of 7dvm by Molmil
DgkA structure in E.coli lipid bilayer
Descriptor: Diacylglycerol kinase
Authors:Li, J, Yang, J.
Deposit date:2021-01-13
Release date:2022-04-13
Last modified:2023-09-27
Method:SOLID-STATE NMR
Cite:Structure of membrane diacylglycerol kinase in lipid bilayers.
Commun Biol, 4, 2021
7ELF
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BU of 7elf by Molmil
Nitrilase-Like Protein Nit2 from Kluyve-romyces lactis
Descriptor: KLLA0E15247p
Authors:Jin, C.W, Chang, J.H.
Deposit date:2021-04-10
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Nitrilase-Like Protein Nit2 from Kluyveromyces lactis.
Crystals, 11, 2021
5IYC
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BU of 5iyc by Molmil
Human core-PIC in the initial transcribing state
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
Authors:He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
Deposit date:2016-03-24
Release date:2016-05-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016

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数据于2024-09-11公开中

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