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PDB: 4123 results

5ITT
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BU of 5itt by Molmil
Crystal Structure of Human NEIL1 bound to duplex DNA containing THF
Descriptor: DNA (26-MER), Endonuclease 8-like 1, GLYCEROL
Authors:Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
Deposit date:2016-03-17
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
5IW1
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BU of 5iw1 by Molmil
Crystal Structure of B4.2.3 T-Cell Receptor
Descriptor: T-CELL RECEPTOR ALPHA CHAIN, T-CELL RECEPTOR BETA CHAIN
Authors:Natarajan, K, Jiang, J, Margulies, D.
Deposit date:2016-03-21
Release date:2017-03-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:An allosteric site in the T-cell receptor C beta domain plays a critical signalling role.
Nat Commun, 8, 2017
7WQL
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BU of 7wql by Molmil
Bovin Beta-lactoglobulin binding with zinc ions
Descriptor: Beta-lactoglobulin, ZINC ION
Authors:Li, T, Ma, J, Zang, J, Zhao, G, Zhang, T.
Deposit date:2022-01-25
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Zinc binding strength of proteins dominants zinc uptake in Caco-2 cells.
Rsc Adv, 12, 2022
4QNH
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BU of 4qnh by Molmil
Calcium-calmodulin (T79D) complexed with the calmodulin binding domain from a small conductance potassium channel SK2-a
Descriptor: CALCIUM ION, Calmodulin, SULFATE ION, ...
Authors:Zhang, M, Pascal, J.M, Logothetis, D.E, Zhang, J.F.
Deposit date:2014-06-17
Release date:2014-08-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Selective phosphorylation modulates the PIP2 sensitivity of the CaM-SK channel complex.
Nat.Chem.Biol., 10, 2014
2L7Y
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BU of 2l7y by Molmil
Solution structure of a putative surface protein
Descriptor: Putative endo-beta-N-acetylglucosaminidase
Authors:Wang, T, Yuan, G, Zhang, J, Tu, X.
Deposit date:2010-12-27
Release date:2012-02-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:1H and 15N Assigned Chemical Shifts for a putative surface protein
To be Published
4QPG
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BU of 4qpg by Molmil
Crystal structure of empty hepatitis A virus
Descriptor: CHLORIDE ION, Capsid protein VP0, Capsid protein VP1, ...
Authors:Wang, X, Ren, J, Gao, Q, Hu, Z, Sun, Y, Li, X, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
Deposit date:2014-06-23
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Hepatitis A virus and the origins of picornaviruses.
Nature, 517, 2015
7CFQ
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BU of 7cfq by Molmil
Crystal structure of WDR5 in complex with H3K4me3Q5ser peptide
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, H3K4me3Q5ser peptide, ...
Authors:Zhao, J, Zhang, X, Zang, J.
Deposit date:2020-06-27
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the recognition of histone H3Q5 serotonylation by WDR5.
Sci Adv, 7, 2021
7CFP
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BU of 7cfp by Molmil
Crystal structure of WDR5 in complex with a H3Q5ser peptide
Descriptor: H3Q5ser peptide, SEROTONIN, WD repeat-containing protein 5
Authors:Zhao, J, Zhang, X, Zang, J.
Deposit date:2020-06-27
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the recognition of histone H3Q5 serotonylation by WDR5.
Sci Adv, 7, 2021
6K62
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BU of 6k62 by Molmil
Crystal structure of Xanthomonas PcrK
Descriptor: Histidine kinase
Authors:Ming, Z.H, Tang, J.L, Wu, L.J, Chen, P.
Deposit date:2019-05-31
Release date:2019-09-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The crystal structure of the phytopathogenic bacterial sensor PcrK reveals different cytokinin recognition mechanism from the plant sensor AHK4.
J.Struct.Biol., 208, 2019
8D4P
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BU of 8d4p by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun10-90-3-C1
Descriptor: 2-chloro-N-[(1R)-2-{[2-(3-fluorophenyl)ethyl]amino}-2-oxo-1-(pyridin-3-yl)ethyl]-N-[4-(pentafluoro-lambda~6~-sulfanyl)phenyl]acetamide, 3C-like proteinase
Authors:Butler, S.G, Chen, Y, Wang, J.
Deposit date:2022-06-02
Release date:2023-06-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun10-90-3-C1
To Be Published
5K6Q
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BU of 5k6q by Molmil
Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase catalytic subunit
Descriptor: 2-[(2E)-3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-HYDROXYETHYLIDENE)-4-METHYL-2,3-DIHYDRO-1,3-THIAZOL-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Acetolactate synthase, ...
Authors:Garcia, M.D, Wang, J.-G, Lonhienne, T, Guddat, L.W.
Deposit date:2016-05-25
Release date:2017-05-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.952 Å)
Cite:Crystal structure of plant acetohydroxyacid synthase, the target for several commercial herbicides.
FEBS J., 284, 2017
8A83
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BU of 8a83 by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Fadini, A, van Thor, J, Chang, J.
Deposit date:2022-06-21
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8IWC
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BU of 8iwc by Molmil
Crystal structure of Q9PR55 at pH 6.0
Descriptor: Uncharacterized protein UU089.1
Authors:Hsu, M.F, Ko, T.P, Huang, K.F, Chen, Y.R, Huang, J.S, Hsu, S.T.D.
Deposit date:2023-03-29
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structure, dynamics, and stability of the smallest and most complex 7 1 protein knot.
J.Biol.Chem., 300, 2023
8IWA
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BU of 8iwa by Molmil
Crystal structure of Q9PR55 at pH 6.5
Descriptor: SULFATE ION, Uncharacterized protein UU089.1
Authors:Hsu, M.F, Ko, T.P, Huang, K.F, Chen, Y.R, Huang, J.S, Hsu, S.T.D.
Deposit date:2023-03-29
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure, dynamics, and stability of the smallest and most complex 7 1 protein knot.
J.Biol.Chem., 300, 2023
8IWB
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BU of 8iwb by Molmil
Crystal structure of Q9PR55 at pH 7.5
Descriptor: Uncharacterized protein UU089.1
Authors:Hsu, M.F, Ko, T.P, Huang, K.F, Chen, Y.R, Huang, J.S, Hsu, S.T.D.
Deposit date:2023-03-29
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structure, dynamics, and stability of the smallest and most complex 7 1 protein knot.
J.Biol.Chem., 300, 2023
3HVT
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BU of 3hvt by Molmil
STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
Authors:Steitz, T.A, Smerdon, S.J, Jaeger, J, Wang, J, Kohlstaedt, L.A, Chirino, A.J, Friedman, J.M, Rice, P.A.
Deposit date:1994-07-25
Release date:1994-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.Usa, 91, 1994
7D8T
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BU of 7d8t by Molmil
MITF bHLHLZ complex with M-box DNA
Descriptor: DNA (5'-D(*TP*GP*TP*AP*AP*CP*AP*TP*GP*TP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*AP*CP*AP*CP*AP*TP*GP*TP*TP*AP*CP*AP*G)-3'), Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit
Authors:Guo, M, Fang, P, Wang, J.
Deposit date:2020-10-09
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy.
Cell Res., 33, 2023
7D8R
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BU of 7d8r by Molmil
MITF HLHLZ structure
Descriptor: Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit
Authors:Guo, M, Fang, P, Wang, J.
Deposit date:2020-10-09
Release date:2021-10-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy.
Cell Res., 33, 2023
6OEU
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BU of 6oeu by Molmil
Structure of human Patched1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein patched homolog 1
Authors:Qi, X, Li, X, Wang, J.
Deposit date:2019-03-27
Release date:2019-04-10
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of human Patched and its complex with native palmitoylated sonic hedgehog.
Nature, 560, 2018
7DQO
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BU of 7dqo by Molmil
Marsupenaeus japonicus ferritin mutant-D132R
Descriptor: FE (III) ION, Ferritin
Authors:Tan, X, Liu, Y, Zang, J, Zhang, T, Zhao, G.
Deposit date:2020-12-24
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Hyperthermostability of prawn ferritin nanocage facilitates its application as a robust nanovehicle for nutraceuticals.
Int.J.Biol.Macromol., 191, 2021
8TVA
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BU of 8tva by Molmil
Outer Mat-T4P complex
Descriptor: Fimbrial protein, Maturation protein
Authors:Meng, R, Xing, Z, Thongchol, J, Zhang, J.
Deposit date:2023-08-17
Release date:2024-03-06
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (8.55 Å)
Cite:Structural basis of Acinetobacter type IV pili targeting by an RNA virus.
Nat Commun, 15, 2024
7DQP
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BU of 7dqp by Molmil
Thermal treated Marsupenaeus japonicus ferritin
Descriptor: Ferritin
Authors:Tan, X, Liu, Y, Zang, J, Zhang, T, Zhao, G.
Deposit date:2020-12-24
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Hyperthermostability of prawn ferritin nanocage facilitates its application as a robust nanovehicle for nutraceuticals.
Int.J.Biol.Macromol., 191, 2021
6UP3
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BU of 6up3 by Molmil
Crystal structure of the murine DHX36 helicase in complex with ANP
Descriptor: Dhx36 protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Chuenchor, W, Jiang, J, Xiao, T.S.
Deposit date:2019-10-16
Release date:2020-10-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.691 Å)
Cite:Crystal structure of the murine DHX36 helicase in complex with ANP
To be published
6UP2
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BU of 6up2 by Molmil
Crystal structure of the murine DHX36 helicase
Descriptor: CHLORIDE ION, Dhx36 protein, GLYCEROL
Authors:Chuenchor, W, Jiang, J, Xiao, T.S.
Deposit date:2019-10-16
Release date:2020-10-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of the murine DHX36 helicase
To be published
6IF1
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BU of 6if1 by Molmil
Crystal structure of Ube2K and K48-linked di-ubiquitin complex
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Lim, J.J, Eom, S.H.
Deposit date:2018-09-18
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.466 Å)
Cite:Crystal structure of the Ube2K/E2-25K and K48-linked di-ubiquitin complex provides structural insight into the mechanism of K48-specific ubiquitin chain synthesis.
Biochem. Biophys. Res. Commun., 506, 2018

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