Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 4046 results

1ASH
DownloadVisualize
BU of 1ash by Molmil
THE STRUCTURE OF ASCARIS HEMOGLOBIN DOMAIN I AT 2.2 ANGSTROMS RESOLUTION: MOLECULAR FEATURES OF OXYGEN AVIDITY
Descriptor: HEMOGLOBIN (OXY), OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yang, J, Mathews, F.S, Kloek, A.P, Goldberg, D.E.
Deposit date:1995-01-06
Release date:1995-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure of Ascaris hemoglobin domain I at 2.2 A resolution: molecular features of oxygen avidity.
Proc.Natl.Acad.Sci.USA, 92, 1995
5BW2
DownloadVisualize
BU of 5bw2 by Molmil
X-ray crystal structure of Aplysia californica acetylcholine binding protein (Ac-AChBP) Y55W in complex with 2-Pyridin-3-yl-1-aza-bicyclo[2.2.2]octane; 2-(3-pyridyl)quinuclidine; 2-PQ (TI-4699)
Descriptor: (2R)-2-(pyridin-3-yl)-1-azabicyclo[2.2.2]octane, Soluble acetylcholine receptor
Authors:Bobango, J, Sankaran, B, Park, J.F, Wu, J, Talley, T.T.
Deposit date:2015-06-05
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Comparisons of Binding Affinities for Neuronal Nicotinic Receptors (NNRs) and AChBPs
To Be Published
5SVD
DownloadVisualize
BU of 5svd by Molmil
Nop9, a new PUF-like protein, prevents premature pre-rRNA cleavage to correctly process mature 18S rRNA
Descriptor: Nucleolar protein 9
Authors:Zhang, J, Qiu, C, Hall, T.
Deposit date:2016-08-05
Release date:2016-10-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Nop9 is a PUF-like protein that prevents premature cleavage to correctly process pre-18S rRNA.
Nat Commun, 7, 2016
1RXT
DownloadVisualize
BU of 1rxt by Molmil
Crystal structure of human myristoyl-CoA:protein N-myristoyltransferase.
Descriptor: COBALT (II) ION, Glycylpeptide N-tetradecanoyltransferase 1, SULFATE ION
Authors:Yang, J, Wang, Y, Frey, G, Abeles, R.H, Petsko, G.A, Ringe, D.
Deposit date:2003-12-18
Release date:2005-04-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human myristoyl-CoA:protein N-myristoyltransferase
To be Published
1PKU
DownloadVisualize
BU of 1pku by Molmil
Crystal Structure of Nucleoside Diphosphate Kinase from Rice
Descriptor: Nucleoside Diphosphate Kinase I
Authors:Huang, J.-Y, Chang, C.-Y, Chang, T, Chen, C.-J.
Deposit date:2003-06-06
Release date:2005-02-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of nucleoside diphosphate kinase required for coleoptile elongation in rice (Oryza sativa L.).
J.Struct.Biol., 150, 2005
7WNN
DownloadVisualize
BU of 7wnn by Molmil
Crystal structure of Imine Reductase from Actinoalloteichus hymeniacidonis in complex with NADPH
Descriptor: 3-hydroxyisobutyrate dehydrogenase-like beta-hydroxyacid dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, J, Chen, R, Gao, S.
Deposit date:2022-01-19
Release date:2022-04-06
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Tuning an Imine Reductase for the Asymmetric Synthesis of Azacycloalkylamines by Concise Structure-Guided Engineering.
Angew.Chem.Int.Ed.Engl., 61, 2022
1A4F
DownloadVisualize
BU of 1a4f by Molmil
BAR-HEADED GOOSE HEMOGLOBIN (OXY FORM)
Descriptor: HEMOGLOBIN (ALPHA CHAIN), HEMOGLOBIN (BETA CHAIN), OXYGEN MOLECULE, ...
Authors:Zhang, J, Gu, X.
Deposit date:1998-01-29
Release date:1998-04-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of a high oxygen affinity species of haemoglobin (bar-headed goose haemoglobin in the oxy form).
J.Mol.Biol., 255, 1996
4ZJT
DownloadVisualize
BU of 4zjt by Molmil
X-ray crystal structure of Lymnaea stagnalis acetylcholine binding protein (LsAChBP) in complex with 2-Thiophenylmethylene Anabaseine (2TAB)
Descriptor: (3E)-3-(thiophen-2-ylmethylidene)-3,4,5,6-tetrahydro-2,3'-bipyridine, Acetylcholine-binding protein, PHOSPHATE ION
Authors:Bobango, J, Wu, J, Talley, T.T.
Deposit date:2015-04-29
Release date:2015-05-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-ray crystal structure of Lymnaea stagnalis acetylcholine binding protein (LsAChBP) in complex with 2-Thiophenylmethylene Anabaseine (2TAB)
To Be Published
4ZRU
DownloadVisualize
BU of 4zru by Molmil
X-ray crystal structure of Lymnaea stagnalis acetylcholine binding protein (Ls-AChBP) in complex with 3-[2-[(2S)-pyrrolidin-2-yl]ethynyl]pyridine (TI-5180)
Descriptor: 3-[(2S)-pyrrolidin-2-ylethynyl]pyridine, Acetylcholine-binding protein, PHOSPHATE ION
Authors:Bobango, J, Sankaran, B, Park, J.F, Wu, J, Talley, T.T.
Deposit date:2015-05-12
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparisons of Binding Affinities for Neuronal Nicotinic Receptors (NNRs) and AChBPs, and Structural Features of a High-Affinity, Non-selective NNR Ligand-AChBP Co-crystal Structure
To be Published
5TMF
DownloadVisualize
BU of 5tmf by Molmil
Re-refinement of thermus thermophilus RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Wang, J.
Deposit date:2016-10-12
Release date:2016-11-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:On the validation of crystallographic symmetry and the quality of structures.
Protein Sci., 24, 2015
2ZIU
DownloadVisualize
BU of 2ziu by Molmil
Crystal structure of the Mus81-Eme1 complex
Descriptor: Crossover junction endonuclease EME1, Mus81 protein
Authors:Chang, J.H, Kim, J.J, Choi, J.M, Lee, J.H, Cho, Y.
Deposit date:2008-02-25
Release date:2008-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Mus81-Eme1 complex
Genes Dev., 22, 2008
8ILJ
DownloadVisualize
BU of 8ilj by Molmil
S-formylglutathione hydrolase (BuSFGH) from Burkholderiaceae sp.
Descriptor: S-formylglutathione hydrolase
Authors:Hwang, J, Lee, J.H, Do, H.
Deposit date:2023-03-03
Release date:2024-01-10
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure and functional characterization of an S-formylglutathione hydrolase (BuSFGH) from Burkholderiaceae sp.
Crystals, 13, 2023
3AXE
DownloadVisualize
BU of 3axe by Molmil
The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucanase, CALCIUM ION, ...
Authors:Huang, J.W, Cheng, Y.S, Ko, T.P, Lin, C.Y, Lai, H.L, Chen, C.C, Ma, Y, Huang, C.H, Zheng, Y, Liu, J.R, Guo, R.T.
Deposit date:2011-04-04
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Rational design to improve thermostability and specific activity of the truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase
Appl.Microbiol.Biotechnol., 94, 2012
8IFK
DownloadVisualize
BU of 8ifk by Molmil
Cryo-EM structure of monomeric SPARTA gRNA-ssDNA target complex
Descriptor: MAGNESIUM ION, Piwi domain-containing protein, TIR domain-containing protein, ...
Authors:Zhang, J.T, Jia, N.
Deposit date:2023-02-18
Release date:2024-01-17
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
Nat.Chem.Biol., 20, 2024
5DSH
DownloadVisualize
BU of 5dsh by Molmil
Human PPARgamma ligand binding dmain complexed with SB1406 in a covalent bonded form
Descriptor: N-[3-(benzyloxy)phenyl]-3-nitrobenzamide, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Jang, J.Y.
Deposit date:2015-09-17
Release date:2016-09-21
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Human PPARgamma ligand binding dmain complexed with SB1406 in a covalent bonded form
To Be Published
5DVC
DownloadVisualize
BU of 5dvc by Molmil
Human PPARgamma ligand binding dmain complexed with SB1453 in a covalent bonded form
Descriptor: N-[2-({3-[({4-[(4-methylpiperazin-1-yl)methyl]benzoyl}amino)methyl]benzyl}oxy)phenyl]-3-nitrobenzamide, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Jang, J.Y.
Deposit date:2015-09-21
Release date:2016-09-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human PPARgamma ligand binding dmain complexed with SB1453 in a covalent bonded form
To Be Published
4LCK
DownloadVisualize
BU of 4lck by Molmil
Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA
Descriptor: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2013-06-21
Release date:2013-07-31
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA.
Nature, 500, 2013
1CCP
DownloadVisualize
BU of 1ccp by Molmil
X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, YEAST CYTOCHROME C PEROXIDASE
Authors:Wang, J, Mauro, J.M, Edwards, S.L, Oatley, S.J, Fishel, L.A, Ashford, V.A, Xuong, N.-H, Kraut, J.
Deposit date:1990-02-28
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of recombinant yeast cytochrome c peroxidase and three heme-cleft mutants prepared by site-directed mutagenesis.
Biochemistry, 29, 1990
2ZIV
DownloadVisualize
BU of 2ziv by Molmil
Crystal structure of the Mus81-Eme1 complex
Descriptor: Crossover junction endonuclease EME1, Mus81 protein
Authors:Chang, J.H, Kim, J.J, Choi, J.M, Lee, J.H, Cho, Y.
Deposit date:2008-02-25
Release date:2008-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Mus81-Eme1 complex
Genes Dev., 22, 2008
3QAX
DownloadVisualize
BU of 3qax by Molmil
Crystal structure analysis of the cpb0502
Descriptor: ARGININE, Probable ABC transporter arginine-binding protein ArtJ
Authors:Chang, J.E, Hwang, K.Y.
Deposit date:2011-01-12
Release date:2012-01-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the cpb0502
To be Published
2ZIX
DownloadVisualize
BU of 2zix by Molmil
Crystal structure of the Mus81-Eme1 complex
Descriptor: Crossover junction endonuclease EME1, Crossover junction endonuclease MUS81
Authors:Chang, J.H, Kim, J.J, Choi, J.M, Lee, J.H, Cho, Y.
Deposit date:2008-02-25
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the Mus81-Eme1 complex
Genes Dev., 22, 2008
5TMC
DownloadVisualize
BU of 5tmc by Molmil
Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Wang, J.
Deposit date:2016-10-12
Release date:2016-11-23
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:On the validation of crystallographic symmetry and the quality of structures.
Protein Sci., 24, 2015
8IW5
DownloadVisualize
BU of 8iw5 by Molmil
Crystal structure of liprin-beta H2H3 dimer
Descriptor: CALCIUM ION, Liprin-beta-1
Authors:Zhang, J, Chen, S, Wei, Z.
Deposit date:2023-03-29
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
8IW0
DownloadVisualize
BU of 8iw0 by Molmil
Crystal structure of the KANK1/liprin-beta1 complex
Descriptor: Liprin-beta-1,KN motif and ankyrin repeat domain-containing protein 1
Authors:Zhang, J, Chen, S, Wei, Z, Yu, C.
Deposit date:2023-03-29
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
4IVN
DownloadVisualize
BU of 4ivn by Molmil
The Vibrio vulnificus NanR protein complexed with ManNAc-6P
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, Transcriptional regulator
Authors:Hwang, J, Kim, M.H.
Deposit date:2013-01-23
Release date:2013-07-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the regulation of sialic acid catabolism by the Vibrio vulnificus transcriptional repressor NanR
Proc.Natl.Acad.Sci.USA, 110, 2013

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon