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PDB: 175 results

4NBV
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BU of 4nbv by Molmil
Crystal structure of FabG from Cupriavidus taiwanensis
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-oxoacyl-[acyl-carrier-protein] reductase putative short-chain dehydrogenases/reductases (SDR) family protein
Authors:Pereira, J.H, Mcandrew, R.P, Javidpour, P, Beller, H.R, Adams, P.D.
Deposit date:2013-10-23
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.645 Å)
Cite:Biochemical and Structural Studies of NADH-Dependent FabG Used To Increase the Bacterial Production of Fatty Acids under Anaerobic Conditions.
Appl.Environ.Microbiol., 80, 2014
4NBW
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BU of 4nbw by Molmil
Crystal structure of FabG from Plesiocystis pacifica
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Short-chain dehydrogenase/reductase SDR
Authors:Pereira, J.H, Mcandrew, R.P, Javidpour, P, Beller, H.R, Adams, P.D.
Deposit date:2013-10-23
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and Structural Studies of NADH-Dependent FabG Used To Increase the Bacterial Production of Fatty Acids under Anaerobic Conditions.
Appl.Environ.Microbiol., 80, 2014
3U48
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BU of 3u48 by Molmil
From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
Descriptor: CALCIUM ION, JMB19063, beta-D-glucopyranose
Authors:McAndrew, R.P, Park, J.I, Reindl, W, Friedland, G.D, D'haeseleer, P, Northen, T, Sale, K.L, Simmons, B.A, Adams, P.D.
Deposit date:2011-10-07
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
To be Published
4NBU
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BU of 4nbu by Molmil
Crystal structure of FabG from Bacillus sp
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-oxoacyl-(Acyl-carrier-protein) reductase, ACETOACETYL-COENZYME A
Authors:Pereira, J.H, Mcandrew, R.P, Javidpour, P, Beller, H.R, Adams, P.D.
Deposit date:2013-10-23
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Biochemical and Structural Studies of NADH-Dependent FabG Used To Increase the Bacterial Production of Fatty Acids under Anaerobic Conditions.
Appl.Environ.Microbiol., 80, 2014
4IXR
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BU of 4ixr by Molmil
RT fs X-ray diffraction of Photosystem II, first illuminated state
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J.
Deposit date:2013-01-27
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.9 Å)
Cite:Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.
Science, 340, 2013
4IXQ
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BU of 4ixq by Molmil
RT fs X-ray diffraction of Photosystem II, dark state
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J.
Deposit date:2013-01-27
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.7 Å)
Cite:Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.
Science, 340, 2013
3U4A
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BU of 3u4a by Molmil
From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
Descriptor: CALCIUM ION, JMB19063, beta-D-glucopyranose, ...
Authors:McAndrew, R.P, Park, J.I, Reindl, W, Friedland, G.D, D'haeseleer, P, Northen, T, Sale, K.L, Simmons, B.A, Adams, P.D.
Deposit date:2011-10-07
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:From soil to structure: a novel dimeric family 3-beta--glucosidase isolated from compost using metagenomic analysis
To be Published
4EWP
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BU of 4ewp by Molmil
Crystal structure of FabH from Micrococcus luteus
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3
Authors:Pereira, J.H, Goh, E.-B, Keasling, J.D, Beller, H.R, Adams, P.D.
Deposit date:2012-04-27
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Structure of FabH and factors affecting the distribution of branched fatty acids in Micrococcus luteus.
Acta Crystallogr.,Sect.D, 68, 2012
3KFK
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BU of 3kfk by Molmil
Crystal structures of a group II chaperonin from Methanococcus maripaludis
Descriptor: Chaperonin, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
Deposit date:2009-10-27
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (6.003 Å)
Cite:Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3EZ8
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BU of 3ez8 by Molmil
Crystal Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Cellulase, ...
Authors:Pereira, J.H, Sapra, R, Simmons, B, Adams, P.D.
Deposit date:2008-10-22
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius
Acta Crystallogr.,Sect.D, 65, 2009
4OPI
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BU of 4opi by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPT
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BU of 4opt by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE, ...
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-06
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPU
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BU of 4opu by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-06
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPD
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BU of 4opd by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPL
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BU of 4opl by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPC
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BU of 4opc by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPG
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BU of 4opg by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE, ...
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4K42
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BU of 4k42 by Molmil
Crystal structure of actin in complex with synthetic AplC tail analogue SF01 [(3R,4S,5R,6S,10R,11R,12R)-11-(acetyloxy)-1-(benzyloxy)-14-[formyl(methyl)amino]-5-hydroxy-4,6,10,12-tetramethyl-9-oxotetradecan-3-yl propanoate]
Descriptor: (3R,4S,5R,6S,10R,11R,12R)-11-(acetyloxy)-1-(benzyloxy)-14-[formyl(methyl)amino]-5-hydroxy-4,6,10,12-tetramethyl-9-oxotetradecan-3-yl propanoate, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
Authors:Pereira, J.H, Petchprayoon, C, Moriarty, N.W, Fink, S.J, Cecere, G, Paterson, I, Adams, P.D, Marriott, G.
Deposit date:2013-04-11
Release date:2014-10-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and biochemical studies of actin in complex with synthetic macrolide tail analogues.
Chemmedchem, 9, 2014
5OF4
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BU of 5of4 by Molmil
The cryo-EM structure of human TFIIH
Descriptor: General transcription factor IIH subunit 2, General transcription factor IIH subunit 3, General transcription factor IIH subunit 4,p52,General transcription factor IIH subunit 4, ...
Authors:Greber, B.J, Nguyen, T.H.D, Fang, J, Afonine, P.V, Adams, P.D, Nogales, E.
Deposit date:2017-07-10
Release date:2017-09-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The cryo-electron microscopy structure of human transcription factor IIH.
Nature, 549, 2017
4K43
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BU of 4k43 by Molmil
Crystal structure of actin in complex with synthetic AplC tail analogue GC04 [N-{(1E,4R,5R,7E,9S,10S,11S)-4,10-dimethoxy-11-[(2S,4S,5S)-2-(4-methoxyphenyl)-5-methyl-1,3-dioxan-4-yl]-5,9-dimethyl-6-oxododeca-1,7-dien-1-yl}-N-methylformamide]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Pereira, J.H, Petchprayoon, C, Moriarty, N.W, Fink, S.J, Cecere, G, Paterson, I, Adams, P.D, Marriott, G.
Deposit date:2013-04-11
Release date:2014-10-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and biochemical studies of actin in complex with synthetic macrolide tail analogues.
Chemmedchem, 9, 2014
4K41
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BU of 4k41 by Molmil
Crystal structure of actin in complex with marine macrolide kabiramide C
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Pereira, J.H, Petchprayoon, C, Moriarty, N.W, Fink, S.J, Cecere, G, Paterson, I, Adams, P.D, Marriott, G.
Deposit date:2013-04-11
Release date:2014-10-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and biochemical studies of actin in complex with synthetic macrolide tail analogues.
Chemmedchem, 9, 2014
3PL3
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BU of 3pl3 by Molmil
Crystal structure of Cel7A from Talaromyces emersonii in complex with cellopentaose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cellobiohydrolase 1 catalytic domain, SULFATE ION, ...
Authors:Qin, L, Pereira, J.H, McAndrew, R.P, Simmons, B.A, Sapra, R, Adams, P.D, Sale, K.L.
Deposit date:2010-11-12
Release date:2011-12-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1804 Å)
Cite:

3PFJ
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BU of 3pfj by Molmil
Crystal structure of Cel7A from Talaromyces emersonii
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cellobiohydrolase 1 catalytic domain, SULFATE ION, ...
Authors:Qin, L, Pereira, J.H, McAndrew, R.P, Simmons, B.A, Sapra, R, Adams, P.D, Sale, K.L.
Deposit date:2010-10-28
Release date:2011-11-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3611 Å)
Cite:

2NX6
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BU of 2nx6 by Molmil
Structure of NOWA cysteine rich domain 6
Descriptor: Nematocyst outer wall antigen
Authors:Meier, S, Jensen, P.R, Adamczyk, P, Bachinger, H.P, Holstein, T.W, Engel, J, Ozbek, S, Grzesiek, S.
Deposit date:2006-11-17
Release date:2007-10-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Sequence-structure and structure-function analysis in cysteine-rich domains forming the ultrastable nematocyst wall.
J.Mol.Biol., 368, 2007
2NX7
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BU of 2nx7 by Molmil
Structure of NOWA cysteine rich domain 8
Descriptor: Nematocyst outer wall antigen
Authors:Meier, S, Jensen, P.R, Adamczyk, P, Bachinger, H.P, Holstein, T.W, Engel, J, Ozbek, S, Grzesiek, S.
Deposit date:2006-11-17
Release date:2007-10-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Sequence-structure and structure-function analysis in cysteine-rich domains forming the ultrastable nematocyst wall.
J.Mol.Biol., 368, 2007

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