Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 35 件

1RSB
DownloadVisualize
BU of 1rsb by Molmil
X-ray study of the DNA oligomer d(ATATAT) in P65 space group
分子名称: 5'-D(*AP*TP*AP*TP*AP*T)-3'
著者Abrescia, N.G, Gonzalez, C, Gouyette, C, Subirana, J.A.
登録日2003-12-09
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献X-ray and NMR studies of the DNA oligomer d(ATATAT): Hoogsteen base pairing in duplex DNA.
Biochemistry, 43, 2004
6H82
DownloadVisualize
BU of 6h82 by Molmil
Cryo-EM structure of the archaeal extremophilic internal membrane containing Haloarcula hispanica icosahedral virus 2 (HHIV-2) at 3.78 Angstroms resolution.
分子名称: GPS III, Uncharacterized protein, VP16 (vertex complex), ...
著者Abrescia, N.G, Santos-Perez, I, Charro, D.
登録日2018-08-01
公開日2019-04-03
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.78 Å)
主引用文献Structural basis for assembly of vertical single beta-barrel viruses.
Nat Commun, 10, 2019
6H9C
DownloadVisualize
BU of 6h9c by Molmil
Cryo-EM structure of archaeal extremophilic internal membrane-containing Haloarcula californiae icosahedral virus 1 (HCIV-1) at 3.74 Angstroms resolution.
分子名称: (Half) GPS-II protein located underneath the two-tower capsomer sitting ON the icosahedral 2-fold axis., GPS-II protein located underneath the two-tower capsomer NOT sitting on the icosahedral 2-fold axis., GPS-III molecule located underneath the capsomer close to the icosahedral three-fold axis., ...
著者Abrescia, N.G, Santos-Perez, I, Charro, D.
登録日2018-08-03
公開日2019-03-27
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structural basis for assembly of vertical single beta-barrel viruses.
Nat Commun, 10, 2019
1W8X
DownloadVisualize
BU of 1w8x by Molmil
Structural analysis of PRD1
分子名称: MAJOR CAPSID PROTEIN (PROTEIN P3), PROTEIN P16, PROTEIN P30, ...
著者Abrescia, N.G.A, Cockburn, J.J.B, Grimes, J.M, Sutton, G.C, Diprose, J.M, Butcher, S.J, Fuller, S.D, San Martin, C, Burnett, R.M, Stuart, D.I, Bamford, D.H, Bamford, J.K.H.
登録日2004-10-01
公開日2004-11-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Insights Into Assembly from Structural Analysis of Bacteriophage Prd1.
Nature, 432, 2004
446D
DownloadVisualize
BU of 446d by Molmil
STRUCTURE OF THE OLIGONUCLEOTIDE D(CGTATATACG) AS A SITE SPECIFIC COMPLEX WITH NICKEL IONS
分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3'), NICKEL (II) ION
著者Abrescia, N.G.A, Malinina, L, Gonzaga, L.F, Huynh-Dinh, T, Neidle, S, Subirana, J.A.
登録日1999-01-15
公開日1999-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the oligonucleotide d(CGTATATACG) as a site-specific complex with nickel ions.
Nucleic Acids Res., 27, 1999
473D
DownloadVisualize
BU of 473d by Molmil
NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2
分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3'), NETROPSIN, NICKEL (II) ION
著者Abrescia, N.G.A, Malinina, L, Subirana, J.A.
登録日1999-05-18
公開日1999-12-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Stacking interaction of guanine with netropsin in the minor groove of d(CGTATATACG)2.
J.Mol.Biol., 294, 1999
2W0C
DownloadVisualize
BU of 2w0c by Molmil
X-ray structure of the entire lipid-containing bacteriophage PM2
分子名称: CALCIUM ION, MAJOR CAPSID PROTEIN P2, PROTEIN 2, ...
著者Abrescia, N.G.A, Grimes, J.M, Kivela, H.M, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
登録日2008-08-13
公開日2008-09-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (7 Å)
主引用文献Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2
Mol.Cell, 31, 2008
1GQU
DownloadVisualize
BU of 1gqu by Molmil
Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing
分子名称: DNA (5'(*AP*TP*AP*UP*AP*T)-3')
著者Abrescia, N.G.A, Thompson, A, Huynh-Dinh, T, Subirana, J.A.
登録日2001-12-05
公開日2002-12-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of an Antiparallel DNA Fragment with Hoogsteen Base Pairing
Proc.Natl.Acad.Sci.USA, 99, 2002
2VVD
DownloadVisualize
BU of 2vvd by Molmil
Crystal structure of the receptor binding domain of the spike protein P1 from bacteriophage PM2
分子名称: CALCIUM ION, SPIKE PROTEIN P1
著者Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
登録日2008-06-06
公開日2008-09-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
2VVE
DownloadVisualize
BU of 2vve by Molmil
Crystal structure of the stem and receptor binding domain of the spike protein P1 from bacteriophage PM2
分子名称: CALCIUM ION, CHLORIDE ION, SPIKE PROTEIN P1
著者Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
登録日2008-06-06
公開日2008-09-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
2VVF
DownloadVisualize
BU of 2vvf by Molmil
Crystal structure of the major capsid protein P2 from Bacteriophage PM2
分子名称: CALCIUM ION, MAJOR CAPSID PROTEIN P2
著者Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
登録日2008-06-06
公開日2008-09-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
5M3D
DownloadVisualize
BU of 5m3d by Molmil
Structural tuning of CD81LEL (space group P31)
分子名称: 1,2-ETHANEDIOL, CD81 antigen, PHOSPHATE ION
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-14
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
5M2C
DownloadVisualize
BU of 5m2c by Molmil
Structural tuning of CD81LEL (space group P32 1 2)
分子名称: CD81 antigen, PHOSPHATE ION
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-12
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.961 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
5M33
DownloadVisualize
BU of 5m33 by Molmil
Structural tuning of CD81LEL (space group P21)
分子名称: 1,2-ETHANEDIOL, CD81 antigen
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-14
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
5M3T
DownloadVisualize
BU of 5m3t by Molmil
Structural tuning of CD81LEL (space group P64)
分子名称: 1,2-ETHANEDIOL, CD81 antigen, CHLORIDE ION
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-17
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.021 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
5M4R
DownloadVisualize
BU of 5m4r by Molmil
Structural tuning of CD81LEL (space group C2)
分子名称: 1,2-ETHANEDIOL, CD81 antigen, SULFATE ION
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-19
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
2UWI
DownloadVisualize
BU of 2uwi by Molmil
Structure of CrmE, a poxvirus TNF receptor
分子名称: CRME PROTEIN
著者Graham, S.C, Bahar, M.W, Abrescia, N.G, Smith, G.L, Stuart, D.I, Grimes, J.M.
登録日2007-03-22
公開日2007-07-10
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Crme, a Virus-Encoded Tumour Necrosis Factor Receptor.
J.Mol.Biol., 372, 2007
7OOK
DownloadVisualize
BU of 7ook by Molmil
Bacteriophage PRD1 Major Capsid Protein P3 in complex with CPZ
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, CHLORIDE ION, ...
著者Duyvesteyn, H.M.E, Peccati, F, Martinez-Castillo, A, Jimenez-Oses, G, Oksanen, H.M, Stuart, D.I, Abrescia, N.G.A.
登録日2021-05-27
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Bacteriophage PRD1 as a nanoscaffold for drug loading
Nanoscale, 13, 2021
4V8S
DownloadVisualize
BU of 4v8s by Molmil
Archaeal RNAP-DNA binary complex at 4.32Ang
分子名称: 5'-D(*AP*TP*AP*GP*AP*GP*TP*AP*TP*AP*AP*GP*AP*TP *AP*G)-3', 5'-D(*TP*CP*TP*TP*AP*TP*AP*CP*TP*CP*TP*AP*TP*CP)-3', DNA-DIRECTED RNA POLYMERASE, ...
著者Wojtas, M.N, Mogni, M, Millet, O, Bell, S.D, Abrescia, N.G.A.
登録日2012-07-12
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (4.323 Å)
主引用文献Structural and Functional Analyses of the Interaction of Archaeal RNA Polymerase with DNA.
Nucleic Acids Res., 40, 2012
4V5V
DownloadVisualize
BU of 4v5v by Molmil
Structure of respiratory syncytial virus nucleocapsid protein, P1 crystal form
分子名称: RESPIRATORY SYNCYTIAL VIRUS NUCLEOCAPSID PROTEIN, RNA
著者El Omari, K, Dhaliwal, B, Ren, J, Abrescia, N.G.A, Lockyer, M, Powell, K.L, Hawkins, A.R, Stammers, D.K.
登録日2011-05-04
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structures of Respiratory Syncytial Virus Nucleocapsid Protein from Two Crystal Forms: Details of Potential Packing Interactions in the Native Helical Form.
Acta Crystallogr.,Sect.F, 67, 2011
8A9U
DownloadVisualize
BU of 8a9u by Molmil
Full AAV3B-VP1KO virion
分子名称: Capsid protein VP1
著者Arriaga, I, Abrescia, N.G.A.
登録日2022-06-29
公開日2022-09-21
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cellular and Structural Characterization of VP1 and VP2 Knockout Mutants of AAV3B Serotype and Implications for AAV Manufacturing.
Hum Gene Ther, 33, 2022
3DUZ
DownloadVisualize
BU of 3duz by Molmil
Crystal structure of the postfusion form of baculovirus fusion protein GP64
分子名称: MERCURY (II) ION, Major envelope glycoprotein
著者Kadlec, J, Loureiro, S, Abrescia, N.G.A, Jones, I.M, Stuart, D.I.
登録日2008-07-18
公開日2008-09-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The postfusion structure of baculovirus gp64 supports a unified view of viral fusion machines.
Nat.Struct.Mol.Biol., 15, 2008
4AYB
DownloadVisualize
BU of 4ayb by Molmil
RNAP at 3.2Ang
分子名称: DNA-DIRECTED RNA POLYMERASE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Wojtas, M.N, Mogni, M, Millet, O, Bell, S.D, Abrescia, N.G.A.
登録日2012-06-19
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.202 Å)
主引用文献Structural and Functional Analyses of the Interaction of Archaeal RNA Polymerase with DNA.
Nucleic Acids Res., 40, 2012
1G3V
DownloadVisualize
BU of 1g3v by Molmil
CRYSTAL STRUCTURE OF NICKEL-D[CGTGTACACG]2
分子名称: 5'-D(*CP*GP*TP*GP*TP*AP*CP*AP*CP*G)-3', NICKEL (II) ION
著者Subirana, J.A, Abrescia, N.G.A.
登録日2000-10-25
公開日2002-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Nickel-guanine interactions in DNA: crystal structure of nickel-d[CGTGTACACG]2.
J.Biol.Inorg.Chem., 7, 2002
2Y0S
DownloadVisualize
BU of 2y0s by Molmil
Crystal structure of Sulfolobus shibatae RNA polymerase in P21 space group
分子名称: DNA-DIRECTED RNA POLYMERASE, DNA-DIRECTED RNA POLYMERASE SUBUNIT A'', DNA-DIRECTED RNA POLYMERASE SUBUNIT D, ...
著者Wojtas, M, Peralta, B, Ondiviela, M, Mogni, M, Bell, S.D, Abrescia, N.G.A.
登録日2010-12-07
公開日2011-02-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Archaeal RNA polymerase: the influence of the protruding stalk in crystal packing and preliminary biophysical analysis of the Rpo13 subunit.
Biochem. Soc. Trans., 39, 2011

 

12>

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon