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PDB: 133 件
7EYR
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Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF apo
分子名称: 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, FE (II) ION
著者Tao, H, Mori, T, Abe, I.
登録日2021-06-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF.
Nat Commun, 13, 2022
7EYU
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BU of 7eyu by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF-N65T mutant with andiconin D
分子名称: 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, Andiconin D, FE (II) ION, ...
著者Tao, H, Mori, T, Abe, I.
登録日2021-06-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF.
Nat Commun, 13, 2022
7F0Z
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Crystal structure of NsrQ W31A
分子名称: NsrQ
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7EYW
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Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF with terretonin C
分子名称: 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, FE (II) ION, N-OXALYLGLYCINE, ...
著者Tao, H, Mori, T, Abe, I.
登録日2021-06-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF.
Nat Commun, 13, 2022
7EYS
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Complex structure of SptF with Fe, alpha-ketoglutarate, and andiconin D
分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, Andiconin D, ...
著者Tao, H, Mori, T, Abe, I.
登録日2021-06-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF.
Nat Commun, 13, 2022
7F0Y
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Crystal structure of isomerase NsrQ F58A in complex with substrate analogue
分子名称: NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3-oxidanyl-benzoate
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F11
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Crystal structure of NsrQ M128I in complex with substrate analogue 7
分子名称: NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3,6-bis(oxidanyl)benzoate
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7FCB
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SptF 9 residues truncated mutant
分子名称: 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, FE (II) ION, N-OXALYLGLYCINE
著者Hui, T, Mori, T, Abe, I.
登録日2021-07-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF.
Nat Commun, 13, 2022
7F13
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Crystal structure of isomerase Dcr3
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Dcr3
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7EYT
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BU of 7eyt by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF with andilesin C and NOG
分子名称: 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, Andilesin C, FE (II) ION, ...
著者Tao, H, Mori, T, Abe, I.
登録日2021-06-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF.
Nat Commun, 13, 2022
7F14
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Crystal structure of isomerase Dcr3 complex with substrate analogue 3
分子名称: Dcr3, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3-oxidanyl-benzoate
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F0O
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BU of 7f0o by Molmil
Crystal structure of selenomethionine-labeled isomerase NsrQ
分子名称: NsrQ
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-06
公開日2022-04-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F10
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BU of 7f10 by Molmil
Crystal structure of NsrQ M128I in complex with substrate analogue 3
分子名称: NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3-oxidanyl-benzoate
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
5GK2
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BU of 5gk2 by Molmil
The structure of the H302A mutant of StlD
分子名称: Ketosynthase StlD
著者Mori, T, Dngfeng, Y, Morita, H, Abe, I.
登録日2016-07-03
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK0
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BU of 5gk0 by Molmil
Crystal structure of selnomethionin-labeled ketosynthase StlD
分子名称: Ketosynthase StlD
著者Mori, T, Saito, Y, Morita, H, Abe, I.
登録日2016-07-03
公開日2017-07-05
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.331 Å)
主引用文献Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK1
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BU of 5gk1 by Molmil
Crystal structure of the ketosynthase StlD complexed with substrate
分子名称: 3-OXO-5-METHYLHEXANOIC ACID, Ketosynthase StlD
著者Mori, T, Saito, Y, Morita, H, Abe, I.
登録日2016-07-03
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5X9J
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BU of 5x9j by Molmil
Structure of PrhC from Penicillium brasilianum NBRC 6234
分子名称: PrhC
著者Mori, T, Wang, H, Matsuda, Y, Abe, I.
登録日2017-03-08
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5WQH
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BU of 5wqh by Molmil
Structure of fungal meroterpenoid isomerase Trt14 complexed with substrate analog and endo-terretonin D
分子名称: CALCIUM ION, Isomerase trt14, methyl (2S,4aR,4bS,5S,6aS,10aS,10bS,12aS)-2,4b,7,7,10a,12,12a-heptamethyl-5-oxidanyl-1,4,6,8-tetrakis(oxidanylidene)-4a,5,6a,9,10,10b-hexahydronaphtho[1,2-h]isochromene-2-carboxylate, ...
著者Mori, T, Matsuda, Y, Abe, I.
登録日2016-11-26
公開日2017-07-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5WQI
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Structure of fungal meroterpenoid isomerase Trt14 complexed with hydrolyzed product
分子名称: (1R,2S,4aS,4bS,8aS,10S,10aS)-2-[(2S)-3-methoxy-2-methyl-2-oxidanyl-3-oxidanylidene-propanoyl]-2,3,4b,8,8,10a-hexamethyl-10-oxidanyl-7,9-bis(oxidanylidene)-1,4a,5,6,8a,10-hexahydrophenanthrene-1-carboxylic acid, CALCIUM ION, Isomerase trt14
著者Mori, T, Matsuda, Y, Abe, I.
登録日2016-11-27
公開日2017-07-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5WQF
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BU of 5wqf by Molmil
Structure of fungal meroterpenoid isomerase Trt14
分子名称: CALCIUM ION, Isomerase trt14, N-PROPANOL
著者Mori, T, Iwabuchi, T, Matsuda, Y, Abe, I.
登録日2016-11-26
公開日2017-07-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5WQG
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BU of 5wqg by Molmil
Structure of fungal meroterpenoid isomerase Trt14 complexed with terretonin D
分子名称: CALCIUM ION, Isomerase trt14, methyl (2S,4aR,4bS,5S,6aS,10aS,10bS,12aS)-2,4b,7,7,10a,12a-hexamethyl-12-methylidene-5-oxidanyl-1,4,6,8-tetrakis(oxidanylidene) -5,6a,9,10,10b,11-hexahydro-4aH-naphtho[1,2-h]isochromene-2-carboxylate
著者Mori, T, Matsuda, Y, Abe, I.
登録日2016-11-26
公開日2017-07-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5Z43
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Crystal structure of prenyltransferase AmbP1 apo structure
分子名称: AmbP1, MAGNESIUM ION
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.361 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
5Z45
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Crystal structure of prenyltransferase AmbP1 pH6.5 complexed with GSPP and cis-indolyl vinyl isonitrile
分子名称: 3-[(Z)-2-isocyanoethenyl]-1H-indole, AmbP1, GERANYL S-THIOLODIPHOSPHATE, ...
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
5X9K
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Structure of AusH from Aspergillus nidulans
分子名称: Austinol synthesis protein H
著者Iwabuchi, T, Matsuda, Y, Abe, I.
登録日2017-03-08
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5Z44
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BU of 5z44 by Molmil
Crystal structure of prenyltransferase AmbP1 complexed with GSPP
分子名称: AmbP1, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.458 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018

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