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PDB: 178 results

5LS8
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Light-activated ruthenium complex bound to a DNA quadruplex
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*A)-3'), POTASSIUM ION, delta-[Ru(tap2-dppz-CN)]2+, ...
Authors:McQuaid, K.T, Abell, H, Hall, J.P, Cardin, C.J.
Deposit date:2016-08-22
Release date:2018-01-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Studies Reveal Enantiospecific Recognition of a DNA G-Quadruplex by a Ruthenium Polypyridyl Complex.
Angew.Chem.Int.Ed.Engl., 58, 2019
3WIQ
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Crystal structure of kojibiose phosphorylase complexed with kojibiose
Descriptor: Kojibiose phosphorylase, SULFATE ION, alpha-D-glucopyranose-(1-2)-beta-D-glucopyranose
Authors:Okada, S, Yamamoto, T, Watanabe, H, Nishimoto, T, Chaen, H, Fukuda, S, Wakagi, T, Fushinobu, S.
Deposit date:2013-09-24
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and mutational analysis of substrate recognition in kojibiose phosphorylase
Febs J., 281, 2014
3WIR
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Crystal structure of kojibiose phosphorylase complexed with glucose
Descriptor: GLYCEROL, Kojibiose phosphorylase, PHOSPHATE ION, ...
Authors:Okada, S, Yamamoto, T, Watanabe, H, Nishimoto, T, Chaen, H, Fukuda, S, Wakagi, T, Fushinobu, S.
Deposit date:2013-09-24
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and mutational analysis of substrate recognition in kojibiose phosphorylase
Febs J., 281, 2014
1BQ5
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NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051
Descriptor: COPPER (II) ION, NITRITE REDUCTASE
Authors:Inoue, T, Gotowda, M, Deligeer, Suzuki, S, Kataoka, K, Yamaguchi, K, Watanabe, H, Goho, M, Yasushi, K.A.I.
Deposit date:1998-08-21
Release date:1999-08-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 A resolution: comparison of blue and green nitrite reductases.
J.Biochem.(Tokyo), 124, 1998
2W7V
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periplasmic domain of EpsL from Vibrio parahaemolyticus
Descriptor: 1,2-ETHANEDIOL, GENERAL SECRETION PATHWAY PROTEIN L, PHOSPHATE ION
Authors:Abendroth, J, Kreger, A.C, Abendroth, H, Sandkvist, M, Hol, W.G.J.
Deposit date:2009-01-06
Release date:2010-03-31
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Dimer Formed by the Periplasmic Domain of Epsl from the Type 2 Secretion System of Vibrio Parahaemolyticus.
J.Struct.Biol., 168, 2009
1G04
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BU of 1g04 by Molmil
SOLUTION STRUCTURE OF SYNTHETIC 26-MER PEPTIDE CONTAINING 145-169 SHEEP PRION PROTEIN SEGMENT AND C-TERMINAL CYSTEINE
Descriptor: MAJOR PRION PROTEIN
Authors:Kozin, S.A, Bertho, G, Mazur, A.K, Rabesona, H, Girault, J.-P, Haertle, T, Takahashi, M, Debey, P, Hui Bon Hoa, G.
Deposit date:2000-10-05
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Sheep prion protein synthetic peptide spanning helix 1 and beta-strand 2 (residues 142-166) shows beta-hairpin structure in solution.
J.Biol.Chem., 276, 2001
7PSC
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BU of 7psc by Molmil
Crystal structure of the disease-causing I358T mutant of the human dihydrolipoamide dehydrogenase
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, mitochondrial, ...
Authors:Nemes-Nikodem, E, Szabo, E, Zambo, Z, Vass, K.R, Taberman, H, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A.
Deposit date:2021-09-22
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.436 Å)
Cite:Structural and Biochemical Investigation of Selected Pathogenic Mutants of the Human Dihydrolipoamide Dehydrogenase.
Int J Mol Sci, 24, 2023
1TV0
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Solution structure of cryptdin-4, the most potent alpha-defensin from mouse Paneth cells
Descriptor: Cryptdin-4
Authors:Jing, W, Hunter, H.N, Tanabe, H, Ouellette, A.J, Vogel, H.J.
Deposit date:2004-06-25
Release date:2005-01-04
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of Cryptdin-4, a Mouse Paneth Cell alpha-Defensin.
Biochemistry, 43, 2004
1S4T
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Solution structure of synthetic 21mer peptide spanning region 135-155 (in human numbering) of sheep prion protein
Descriptor: Major prion protein
Authors:Kozin, S.A, Lepage, C, Hui Bon Hoa, G, Rabesona, H, Mazur, A.K, Blond, A, Cheminant, M, Haertle, T, Debey, P, Rebuffat, S.
Deposit date:2004-01-18
Release date:2004-01-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Specific recognition between surface loop 2 (132-143) and helix 1 (144-154) within sheep prion protein from in vitro studies of synthetic peptides
To be Published
8IFJ
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BU of 8ifj by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from methanogenic archaeon ISO4-G1
Descriptor: Pyrrolysyl-tRNA synthetase PylS
Authors:Yanagisawa, T, Tanabe, H, Yokoyama, S.
Deposit date:2023-02-18
Release date:2023-03-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal Structure of Pyrrolysyl-tRNA Synthetase from a Methanogenic Archaeon ISO4-G1 and Its Structure-Based Engineering for Highly-Productive Cell-Free Genetic Code Expansion with Non-Canonical Amino Acids.
Int J Mol Sci, 24, 2023
1KSD
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The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 6.5.
Descriptor: CALCIUM ION, Endo-b-1,4-glucanase
Authors:Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F.
Deposit date:2002-01-12
Release date:2003-01-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of an endoglucanase from termite, Nasutitermes takasagoensis.
Acta Crystallogr.,Sect.D, 58, 2002
1KS8
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The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 2.5.
Descriptor: Endo-b-1,4-glucanase, SULFATE ION
Authors:Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F.
Deposit date:2002-01-11
Release date:2003-01-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of an endoglucanase from termite, Nasutitermes takasagoensis.
Acta Crystallogr.,Sect.D, 58, 2002
1KSC
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The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 5.6.
Descriptor: CALCIUM ION, Endo-b-1,4-glucanase
Authors:Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F.
Deposit date:2002-01-11
Release date:2003-01-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of an endoglucanase from termite, Nasutitermes takasagoensis.
Acta Crystallogr.,Sect.D, 58, 2002
3QWM
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BU of 3qwm by Molmil
Crystal Structure of GEP100, the plextrin homology domain of IQ motif and SEC7 domain-containing protein 1 isoform a
Descriptor: IQ motif and SEC7 domain-containing protein 1
Authors:Filippakopoulos, P, Picaud, S, Felletar, I, Feller, S, Janning, M, Sabe, H, Krojer, T, Chaikuad, A, Allerston, C, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-02-28
Release date:2011-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal Structure of GEP100, the plextrin homology domain of IQ motif and SEC7 domain-containing protein 1 isoform a
to be published
3APV
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BU of 3apv by Molmil
Crystal structure of the A variant of human alpha1-acid glycoprotein and amitriptyline complex
Descriptor: ACETIC ACID, Alpha-1-acid glycoprotein 2, Amitriptyline
Authors:Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
Deposit date:2010-10-21
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
3APX
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Crystal structure of the A variant of human alpha1-acid glycoprotein and chlorpromazine complex
Descriptor: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, ACETIC ACID, Alpha-1-acid glycoprotein 2
Authors:Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
Deposit date:2010-10-21
Release date:2011-02-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
3APW
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BU of 3apw by Molmil
Crystal structure of the A variant of human alpha1-acid glycoprotein and disopyramide complex
Descriptor: Alpha-1-acid glycoprotein 2, Disopyramide
Authors:Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
Deposit date:2010-10-21
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
3APU
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BU of 3apu by Molmil
Crystal structure of the A variant of human alpha1-acid glycoprotein
Descriptor: Alpha-1-acid glycoprotein 2, TETRAETHYLENE GLYCOL
Authors:Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
Deposit date:2010-10-21
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
2DKC
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BU of 2dkc by Molmil
Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the substrate complex
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, PHOSPHATE ION, Phosphoacetylglucosamine mutase, ...
Authors:Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K.
Deposit date:2006-04-07
Release date:2006-05-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes.
J.Biol.Chem., 281, 2006
2DKD
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BU of 2dkd by Molmil
Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the product complex
Descriptor: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-galactopyranose, PHOSPHATE ION, Phosphoacetylglucosamine mutase, ...
Authors:Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K.
Deposit date:2006-04-07
Release date:2006-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes.
J.Biol.Chem., 281, 2006
2DKA
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Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the apo-form
Descriptor: Phosphoacetylglucosamine mutase
Authors:Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K.
Deposit date:2006-04-07
Release date:2006-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes.
J.Biol.Chem., 281, 2006
2D1X
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The crystal structure of the cortactin-SH3 domain and AMAP1-peptide complex
Descriptor: SULFATE ION, cortactin isoform a, proline rich region from development and differentiation enhancing factor 1
Authors:Hashimoto, S, Hirose, M, Hashimoto, A, Morishige, M, Yamada, A, Hosaka, H, Akagi, K, Ogawa, E, Oneyama, C, Agatsuma, T, Okada, M, Kobayashi, H, Wada, H, Nakano, H, Ikegami, T, Nakagawa, A, Sabe, H.
Deposit date:2005-09-01
Release date:2006-04-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Targeting AMAP1 and cortactin binding bearing an atypical src homology 3/proline interface for prevention of breast cancer invasion and metastasis.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3AG1
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Bovine Heart Cytochrome c Oxidase in the Carbon Monoxide-bound Fully Reduced State at 280 K
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Muramoto, K, Ohta, K, Shinzawa-Itoh, K, Kanda, K, Taniguchi, M, Nabekura, H, Yamashita, E, Tsukihara, T, Yoshikawa, S.
Deposit date:2010-03-19
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bovine cytochrome c oxidase structures enable O2 reduction with minimization of reactive oxygens and provide a proton-pumping gate
Proc.Natl.Acad.Sci.USA, 107, 2010
3AG4
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Bovine Heart Cytochrome c Oxidase in the Cyanide Ion-bound Fully Reduced State at 100 K
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Muramoto, K, Ohta, K, Shinzawa-Itoh, K, Kanda, K, Taniguchi, M, Nabekura, H, Yamashita, E, Tsukihara, T, Yoshikawa, S.
Deposit date:2010-03-19
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Bovine cytochrome c oxidase structures enable O2 reduction with minimization of reactive oxygens and provide a proton-pumping gate
Proc.Natl.Acad.Sci.USA, 107, 2010
3ASE
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Crystal Structure of Zinc myoglobin soaked with Ru3O cluster
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING ZN, SULFATE ION, ...
Authors:Koshiyama, T, Shirai, M, Hikage, T, Tabe, H, Tanaka, K, Kitagawa, S, Ueno, T.
Deposit date:2010-12-11
Release date:2011-04-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Post-Crystal Engineering of Zinc-Substituted Myoglobin to Construct a Long-Lived Photoinduced Charge-Separation System
Angew.Chem.Int.Ed.Engl., 2011

222415

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