Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89169 results

6PV8
DownloadVisualize
BU of 6pv8 by Molmil
Human alpha3beta4 nicotinic acetylcholine receptor in complex with AT-1001
Descriptor: (3-endo)-N-(2-bromophenyl)-9-methyl-9-azabicyclo[3.3.1]nonan-3-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gharpure, A, Teng, J, Zhuang, Y, Noviello, C.M, Walsh, R.M, Cabuco, R, Howard, R.J, Zaveri, N.T, Lindahl, E, Hibbs, R.E.
Deposit date:2019-07-19
Release date:2019-09-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Agonist Selectivity and Ion Permeation in the alpha 3 beta 4 Ganglionic Nicotinic Receptor.
Neuron, 104, 2019
7BCR
DownloadVisualize
BU of 7bcr by Molmil
Crystal structure of the sugar acid binding protein DctPAm from Advenella mimigardefordensis strain DPN7T in complex with galactonate
Descriptor: L-galactonic acid, Putative TRAP transporter solute receptor DctP
Authors:Schaefer, L, Meinert, C, Kobus, S, Hoeppner, A, Smits, S.H, Steinbuechel, A.
Deposit date:2020-12-21
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the sugar acid-binding protein CxaP from a TRAP transporter in Advenella mimigardefordensis strain DPN7 T .
Febs J., 288, 2021
3GLY
DownloadVisualize
BU of 3gly by Molmil
REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100
Descriptor: GLUCOAMYLASE-471, alpha-D-mannopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Aleshin, A.E, Hoffman, C, Firsov, L.M, Honzatko, R.B.
Deposit date:1994-06-03
Release date:1994-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of glucoamylase from Aspergillus awamori var. X100.
J.Mol.Biol., 238, 1994
7VF1
DownloadVisualize
BU of 7vf1 by Molmil
Solution structure of a duplex-quadruplex hybrid formed by d[G4C2] repeats
Descriptor: DNA (14-mer)
Authors:Maity, A, Lim, K.W, Shneider, N.A, Chen, G, Phan, A.T.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A duplex-quadruplex hybrid formed by d[G4C2] repeats
To be published
8VBK
DownloadVisualize
BU of 8vbk by Molmil
Structure of bovine anti-HIV Fab ElsE5
Descriptor: Bovine Fab ElsE5 heavy chain, Bovine Fab ElsE5 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
7BCO
DownloadVisualize
BU of 7bco by Molmil
Crystal structure of the sugar acid binding protein DctPAm from Advenella mimigardefordensis strain DPN7T in complex with D-foconate
Descriptor: (2R,3S,4S,5S)-2,3,4,5-tetrahydroxyhexanoic acid, Putative TRAP transporter solute receptor DctP
Authors:Schaefer, L, Meinert, C, Kobus, S, Hoeppner, A, Smits, S.H, Steinbuechel, A.
Deposit date:2020-12-21
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the sugar acid-binding protein CxaP from a TRAP transporter in Advenella mimigardefordensis strain DPN7 T .
Febs J., 288, 2021
6SSK
DownloadVisualize
BU of 6ssk by Molmil
Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule
Descriptor: Endogenous retrovirus group K member 24 Gag polyprotein
Authors:Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:2019-09-08
Release date:2020-01-01
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
5U82
DownloadVisualize
BU of 5u82 by Molmil
Crystal structure of a MerB-triethyltin complex
Descriptor: ACETATE ION, Alkylmercury lyase, BROMIDE ION, ...
Authors:Wahba, H.M, Stevenson, M, Mansour, A, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2016-12-13
Release date:2017-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage.
J. Am. Chem. Soc., 139, 2017
5CE5
DownloadVisualize
BU of 5ce5 by Molmil
Probing the roles of two tryptophans surrounding the unique zinc coordination site in lipase family I.5
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, CALCIUM ION, ...
Authors:Sezerman, O.U, Podjarny, A.D, Emel, T, Cousido-Siah, A, Mitschler, A.
Deposit date:2015-07-06
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the roles of two tryptophans surrounding the unique zinc coordination site in lipase family I.5.
Proteins, 84, 2016
6SZ2
DownloadVisualize
BU of 6sz2 by Molmil
Crystal structure of YTHDC1 with fragment 3 (DHU_DC1_149)
Descriptor: SULFATE ION, YTH domain-containing protein 1, ~{N}-methyl-1,6-naphthyridin-4-amine
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-10-01
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Selectively Disrupting m6A-Dependent Protein-RNA Interactions with Fragments.
Acs Chem.Biol., 15, 2020
7YOF
DownloadVisualize
BU of 7yof by Molmil
Crystal Structure of Triple mutant (D67E, A68P, I88L) of O-acetyl-L-serine sulfhydrylase from Haemophilus influenzae at 2.3 A
Descriptor: Cysteine synthase
Authors:Kumar, N, Rahisuddin, R, Saini, N, Singh, A.K.
Deposit date:2022-08-01
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of I88L single mutant of O-acetyl-L-serine sulfhydrylase from Haemophilus influenzae at 2.3 A
To Be Published
3GM6
DownloadVisualize
BU of 3gm6 by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Dorovatovsky, P.V, Tikhonova, T.V, Popov, V.O.
Deposit date:2009-03-13
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of octaheme cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens in a complex with phosphate
Crystallography Reports, 55, 2010
7BCN
DownloadVisualize
BU of 7bcn by Molmil
Crystal structure of the sugar acid binding protein DctPAm from Advenella mimigardefordensis strain DPN7T in complex with Xylonic acid
Descriptor: D-xylonic acid, Putative TRAP transporter solute receptor DctP
Authors:Schaefer, L, Meinert, C, Kobus, S, Hoeppner, A, Smits, S.H, Steinbuechel, A.
Deposit date:2020-12-21
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the sugar acid-binding protein CxaP from a TRAP transporter in Advenella mimigardefordensis strain DPN7 T .
Febs J., 288, 2021
5U8E
DownloadVisualize
BU of 5u8e by Molmil
Crystal Structure of substrate-free arginine kinase from spider Polybetes pythagoricus
Descriptor: SODIUM ION, arginine kinase
Authors:Lopez-Zavala, A.A, Garcia, C.F, Hernadez-Paredes, J, Sotelo-Mundo, R.R.
Deposit date:2016-12-14
Release date:2017-08-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Biochemical and structural characterization of a novel arginine kinase from the spider Polybetes pythagoricus.
PeerJ, 5, 2017
8VBJ
DownloadVisualize
BU of 8vbj by Molmil
Structure of bovine anti-HIV Fab ElsE2
Descriptor: Bovine Fab ElsE2 heavy chain, Bovine Fab ElsE2 light chain, POTASSIUM ION, ...
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
5CFO
DownloadVisualize
BU of 5cfo by Molmil
Crystal structure of anemone STING (Nematostella vectensis) in apo 'rotated' open conformation
Descriptor: Stimulator of Interferon Genes
Authors:Kranzusch, P.J, Wilson, S.C, Lee, A.S.Y, Berger, J.M, Doudna, J.A, Vance, R.E.
Deposit date:2015-07-08
Release date:2015-08-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Ancient Origin of cGAS-STING Reveals Mechanism of Universal 2',3' cGAMP Signaling.
Mol.Cell, 59, 2015
7BJ5
DownloadVisualize
BU of 7bj5 by Molmil
Inulosucrase from Halalkalicoccus jeotgali
Descriptor: Levansucrase
Authors:Ghauri, K, Pijning, T, Munawar, N, Ali, H, Ghauri, M.A, Anwar, M.A, Wallis, R.
Deposit date:2021-01-14
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of an inulosucrase from Halalkalicoccus jeotgali B3T, a halophilic archaeal strain.
Febs J., 288, 2021
7VAX
DownloadVisualize
BU of 7vax by Molmil
V1EG of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state1-2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K.
Deposit date:2021-08-30
Release date:2022-07-13
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
4QJ3
DownloadVisualize
BU of 4qj3 by Molmil
Structure of a fragment of human phospholipase C-beta3 delta472-559, in complex with Galphaq
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Lyon, A.M, Tesmer, J.J.G.
Deposit date:2014-06-03
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular mechanisms of phospholipase C beta 3 autoinhibition.
Structure, 22, 2014
5MNL
DownloadVisualize
BU of 5mnl by Molmil
Cationic trypsin in complex with benzylamine (deuterated sample at 295 K)
Descriptor: BENZYLAMINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.039 Å)
Cite:Cationic trypsin in complex with benzylamine (deuterated sample at 295 K)
to be published
6SW1
DownloadVisualize
BU of 6sw1 by Molmil
Crystal Structure of P. aeruginosa PqsL: R41Y, I43R, G45R, C105G mutant
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Mattevi, A, Rovida, S.
Deposit date:2019-09-19
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Photoinduced monooxygenation involving NAD(P)H-FAD sequential single-electron transfer.
Nat Commun, 11, 2020
7KRU
DownloadVisualize
BU of 7kru by Molmil
Stimulating state of a truncated Hsp70 DnaK fused with a substrate peptide
Descriptor: 1,3-PROPANDIOL, ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK fused with substrate peptide, ...
Authors:Wang, W, Hendrickson, W.A.
Deposit date:2020-11-20
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Conformational equilibria in allosteric control of Hsp70 chaperones.
Mol.Cell, 81, 2021
4YSX
DownloadVisualize
BU of 4ysx by Molmil
Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with the specific inhibitor NN23
Descriptor: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Harada, S, Shiba, T, Sato, D, Yamamoto, A, Nagahama, M, Yone, A, Inaoka, D.K, Sakamoto, K, Inoue, M, Honma, T, Kita, K.
Deposit date:2015-03-17
Release date:2015-08-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015
7YOL
DownloadVisualize
BU of 7yol by Molmil
Crystal structure of tetra mutant (D67E, A68P, L98I, A301S) of O-acetylserine sulfhydrylase from Haemophilus influenzae in complex with high-affinity inhibitory peptide of serine acetyltransferase from Haemophilus influenzae at 2.4 A
Descriptor: Cysteine synthase, Peptide from Serine acetyltransferase
Authors:Saini, N, Kumar, N, Rahisuddin, R, Singh, A.K.
Deposit date:2022-08-01
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of tetra mutant (D67E, A68P, L98I, A301S) of O-acetylserine sulfhydrylase from Haemophilus influenzae in complex with high-affinity inhibitory peptide from serine acetyltransferase of Haemophilus influenzae at 2.4 A
To Be Published
8RM6
DownloadVisualize
BU of 8rm6 by Molmil
Crystal Structure of Human Androgen Receptor DNA Binding Domain Bound to its Response Element: C3(1)ARE
Descriptor: C3(1)ARE_Chain C, C3(1)ARE_Chain D, Isoform 2 of Androgen receptor, ...
Authors:Lee, X.Y, Helsen, C, Van Eynde, W, Voet, A, Claessens, F.
Deposit date:2024-01-05
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural mechanism underlying variations in DNA binding by the androgen receptor.
J.Steroid Biochem.Mol.Biol., 241, 2024

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon