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PDB: 88675 results

8DXJ
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BU of 8dxj by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 1-N-methyl-4-(trifluoromethyl)benzene-1,2-diamine at the NNRTI adjacent site
Descriptor: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, DIMETHYL SULFOXIDE, ...
Authors:Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
Deposit date:2022-08-02
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8SR0
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BU of 8sr0 by Molmil
CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 local refined
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lymphocyte activation gene 3 protein, favezelimab Fab heavy chain, ...
Authors:Mishra, A.K, Shahid, S, Karade, S.S, Mariuzza, R.A.
Deposit date:2023-05-05
Release date:2023-09-06
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 determined using a bivalent Fab as fiducial marker.
Structure, 31, 2023
6WPX
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BU of 6wpx by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in propetide form
Descriptor: BlEst2, IODIDE ION
Authors:Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2020-04-28
Release date:2021-06-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The first structure of Bacillus licheniformis lipase BlEst2 in its propeptide and mature form revealing molecular details of inhibition by its C-terminal domains
To Be Published
6OOD
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BU of 6ood by Molmil
Structure of the pterocarpan synthase dirigent protein PsPTS1
Descriptor: pterocarpan synthase dirigent protein PsPTS1
Authors:Smith, C.A.
Deposit date:2019-04-23
Release date:2020-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Pterocarpan synthase (PTS) structures suggest a common quinone methide-stabilizing function in dirigent proteins and proteins with dirigent-like domains.
J.Biol.Chem., 295, 2020
8DTA
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BU of 8dta by Molmil
Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide.
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ...
Authors:Rosenbaum, J.C, Carlson, A.E.
Deposit date:2022-07-25
Release date:2023-07-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Glutathione modulates metal binding to proteins.
TBD
7S5F
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BU of 7s5f by Molmil
Crystal structure of mannose-6-phosphate reductase from celery (Apium graveolens) leaves with NADP+ and mannonic acid bound
Descriptor: D-MANNONIC ACID, Manose-6-phosphate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zheng, Y, Bhayani, J.A, Romina, I.M, Hartman, M.D, Cereijo, A.E, Ballicora, M.A, Iglesias, A.A, Figueroa, C.M, Liu, D.
Deposit date:2021-09-10
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Determinants of Sugar Alcohol Biosynthesis in Plants: The Crystal Structures of Mannose-6-Phosphate and Aldose-6-Phosphate Reductases.
Plant Cell.Physiol., 63, 2022
8BGA
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BU of 8bga by Molmil
Structure of Mpro in complex with FGA146
Descriptor: 3C-like proteinase nsp5, 4-methoxy-~{N}-[(2~{S})-4-methyl-1-[[(2~{S})-4-nitro-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]-1~{H}-indole-2-carboxamide
Authors:Medrano, F.J, Romero, A.
Deposit date:2022-10-27
Release date:2023-11-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Peptidyl nitroalkene inhibitors of main protease rationalized by computational and crystallographic investigations as antivirals against SARS-CoV-2.
Commun Chem, 7, 2024
8BJ6
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BU of 8bj6 by Molmil
Crystal structure of YopR
Descriptor: SPbeta prophage-derived uncharacterized protein YopR
Authors:Gallego del Sol, F, Marina, A.
Deposit date:2022-11-03
Release date:2023-11-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Characterization of a unique repression system present in arbitrium phages of the SPbeta family.
Cell Host Microbe, 31, 2023
6UAS
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BU of 6uas by Molmil
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose
Descriptor: DI(HYDROXYETHYL)ETHER, Glycoside Hydrolase, ZINC ION, ...
Authors:Vieira, P.S, Cabral, L, Costa, P.A.C.R, Santos, C.R, Murakami, M.T.
Deposit date:2019-09-11
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6O4M
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BU of 6o4m by Molmil
Racemic melittin
Descriptor: D-Melittin, Melittin, SULFATE ION
Authors:Kurgan, K.W, Bingman, C.A, Gellman, S.H, Forest, K.T.
Deposit date:2019-02-28
Release date:2019-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Retention of Native Quaternary Structure in Racemic Melittin Crystals.
J.Am.Chem.Soc., 141, 2019
5IGT
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BU of 5igt by Molmil
Macrolide 2'-phosphotransferase type I - complex with guanosine and erythromycin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ERYTHROMYCIN A, GUANOSINE, ...
Authors:Berghuis, A.M, Fong, D.H.
Deposit date:2016-02-28
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural Basis for Kinase-Mediated Macrolide Antibiotic Resistance.
Structure, 25, 2017
7NBJ
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BU of 7nbj by Molmil
Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with the bisubstrate-like inhibitor (1)
Descriptor: 2-hydroxy-1-(4-(isoquinolin-5-yl)piperazin-1-yl)-2-methyl-3-(3-methyl-4-phenyl-1H-pyrazol-1-yl)propan-1-one, GLYCEROL, Nicotinamide N-methyltransferase
Authors:Schreuder, H.A, Liesum, A.
Deposit date:2021-01-27
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.275 Å)
Cite:Novel Inhibitors of Nicotinamide- N -Methyltransferase for the Treatment of Metabolic Disorders.
Molecules, 26, 2021
6O50
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BU of 6o50 by Molmil
Binary complex of native hAChE with BW284c51
Descriptor: 4-(5-{4-[DIMETHYL(PROP-2-ENYL)AMMONIO]PHENYL}-3-OXOPENTYL)-N,N-DIMETHYL-N-PROP-2-ENYLBENZENAMINIUM, Acetylcholinesterase, GLYCEROL, ...
Authors:Gerlits, O, Kovalevsky, A, Radic, Z.
Deposit date:2019-03-01
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:A new crystal form of human acetylcholinesterase for exploratory room-temperature crystallography studies.
Chem.Biol.Interact., 309, 2019
6UB6
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BU of 6ub6 by Molmil
Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritetraose
Descriptor: CHLORIDE ION, Endo-beta-1,3-glucanase, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, ...
Authors:Santos, C.R, Lima, E.A, Mandelli, F, Murakami, M.T.
Deposit date:2019-09-11
Release date:2020-05-20
Last modified:2020-08-05
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
7AAQ
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BU of 7aaq by Molmil
sugar/H+ symporter STP10 in outward occluded conformation
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, ACETATE ION, ...
Authors:Bavnhoej, L, Paulsen, P.A, Pedersen, B.P.
Deposit date:2020-09-04
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10.
Nat.Plants, 7, 2021
7NBM
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BU of 7nbm by Molmil
Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with the bisubstrate-like inhibitor (33)
Descriptor: (E)-3-((5,6-dihydro-2H,4H-thiazolo[5,4,3-ij]quinolin-2-ylidene)amino)-2-hydroxy-1-(4-(isoquinolin-5-yl)piperazin-1-yl)-2-methylpropan-1-one, Nicotinamide N-methyltransferase
Authors:Schreuder, H.A, Liesum, A.
Deposit date:2021-01-27
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.691 Å)
Cite:Novel Inhibitors of Nicotinamide- N -Methyltransferase for the Treatment of Metabolic Disorders.
Molecules, 26, 2021
7NBQ
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BU of 7nbq by Molmil
Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with the tricyclic inhibitor (4)
Descriptor: 2-methyl-1,2,6,7-tetrahydro-3H,5H-pyrido[3,2,1-ij]quinazolin-3-imine, Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schreuder, H.A, Liesum, A.
Deposit date:2021-01-27
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.479 Å)
Cite:Novel Inhibitors of Nicotinamide- N -Methyltransferase for the Treatment of Metabolic Disorders.
Molecules, 26, 2021
7NIO
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BU of 7nio by Molmil
Crystal structure of the SARS-CoV-2 helicase APO form
Descriptor: SARS-CoV-2 helicase NSP13, ZINC ION
Authors:Newman, J.A, Yosaatmadja, Y, Douangamath, A, Bountra, C, Gileadi, O.
Deposit date:2021-02-12
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase.
Nat Commun, 12, 2021
6O62
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BU of 6o62 by Molmil
Crystal structure of Sec4p, a Rab family GTPase from Candida albicans
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein SEC4
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-03-05
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:To be published
To Be Published
7A3A
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BU of 7a3a by Molmil
Intertwined dimer of the c-Src SH3 domain mutant V111L-N113S-T114S-Q128E at pH 6.0
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C.
Deposit date:2020-08-18
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Intertwined dimer of the c-Src SH3 domain mutant V111L-N113S-T114S-Q128E at pH 6.0
To be published
7NLJ
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BU of 7nlj by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein APikL2A with host target sHMA25 from Setaria italica
Descriptor: 1,2-ETHANEDIOL, APikL2A, sHMA25
Authors:Bentham, A.R, Banfield, M.J.
Deposit date:2021-02-22
Release date:2021-03-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A single amino acid polymorphism in a conserved effector of the multihost blast fungus pathogen expands host-target binding spectrum.
Plos Pathog., 17, 2021
7ONH
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BU of 7onh by Molmil
Crystal structure of the computationally designed SAKe6BE-L3 protein
Descriptor: SAKe6BE-L3, SULFATE ION
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
5LOE
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BU of 5loe by Molmil
Structure of full length Cody from Bacillus subtilis in complex with Ile
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY, ISOLEUCINE
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-09
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
7NN0
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BU of 7nn0 by Molmil
Crystal structure of the SARS-CoV-2 helicase in complex with AMP-PNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SARS-CoV-2 helicase NSP13, ...
Authors:Newman, J.A, Yosaatmadja, Y, Douangamath, A, Bountra, C, Gileadi, O.
Deposit date:2021-02-23
Release date:2021-03-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase.
Nat Commun, 12, 2021
8SSF
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BU of 8ssf by Molmil
Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
Descriptor: RNA-free ribonuclease P, SULFATE ION
Authors:Mendoza, J, Mallik, L, Wilhelm, C.A, Koutmos, M.
Deposit date:2023-05-08
Release date:2023-10-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Bacterial RNA-free RNase P: Structural and functional characterization of multiple oligomeric forms of a minimal protein-only ribonuclease P.
J.Biol.Chem., 299, 2023

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數據於2024-07-31公開中

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