Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 results

7MUB
DownloadVisualize
BU of 7mub by Molmil
KcsA Open gate E71V mutant in Potassium
Descriptor: Fab heavy chain, Fab light chain, POTASSIUM ION, ...
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-05-14
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
6ZZH
DownloadVisualize
BU of 6zzh by Molmil
Structure of soluble SmhB crystal form 2 of the tripartite alpha-pore forming toxin, Smh, from Serratia marcescens.
Descriptor: SmhB
Authors:Churchill-Angus, A.M, Baker, P.J.
Deposit date:2020-08-04
Release date:2021-03-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
Sci Rep, 11, 2021
7OUO
DownloadVisualize
BU of 7ouo by Molmil
Crystal structure of RNA duplex [UCGUGCGA]2 in complex with Ba2+ cation
Descriptor: BARIUM ION, RNA (5'-R(*UP*CP*GP*UP*GP*CP*GP*A)-3')
Authors:Ruszkowski, M, Mao, S, Zheng, Y.Y, Ruszkowska, A, Sheng, J.
Deposit date:2021-06-12
Release date:2022-03-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.212 Å)
Cite:Structural Insights Into the 5'UG/3'GU Wobble Tandem in Complex With Ba 2+ Cation.
Front Mol Biosci, 8, 2021
7MJT
DownloadVisualize
BU of 7mjt by Molmil
KcsA open gate E71V mutant with Barium
Descriptor: BARIUM ION, Fab heavy chain, Fab light chain, ...
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-04-20
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7A27
DownloadVisualize
BU of 7a27 by Molmil
Structure of soluble SmhA crystal form 2 of the tripartite alpha-pore forming toxin, Smh, from Serratia marcescens.
Descriptor: SmhA
Authors:Churchill-Angus, A.M, Baker, P.J.
Deposit date:2020-08-16
Release date:2021-03-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
Sci Rep, 11, 2021
7MK6
DownloadVisualize
BU of 7mk6 by Molmil
KcsA open gate E71V mutant with sodium
Descriptor: Fab heavy chain, Fab light chain, pH-gated potassium channel KcsA
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-04-21
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
6ZZ5
DownloadVisualize
BU of 6zz5 by Molmil
Structure of soluble SmhB of the tripartite alpha-pore forming toxin, Smh, from Serratia marcescens.
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, SmhB
Authors:Churchill-Angus, A.M, Baker, P.J.
Deposit date:2020-08-03
Release date:2021-03-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
Sci Rep, 11, 2021
7M7C
DownloadVisualize
BU of 7m7c by Molmil
Crystal Structure of Hip1 (Rv2224c) mutant - T466A/S228DHA (dehydroalanine)
Descriptor: Carboxylesterase A
Authors:Naffin-Olivos, J.L, Daab, A, Goldfarb, N.E, Doran, M.H, Baikovitz, J, Liu, D, Sun, S, White, A, Dunn, B.M, Rengarajan, J, Petsko, G.A, Ringe, D.
Deposit date:2021-03-27
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibitors and Inactivators of Mycobacterium tuberculosis serine protease Hip1 (Rv2224c)
To Be Published
6UB7
DownloadVisualize
BU of 6ub7 by Molmil
Crystal structure of a GH128 (subgroup V) exo-beta-1,3-glucanase from Cryptococcus neoformans (CnGH128_V)
Descriptor: Glyco_hydro_cc domain-containing protein, POTASSIUM ION
Authors:Santos, C.R, Costa, P.A.C.R, Murakami, M.T.
Deposit date:2019-09-11
Release date:2020-05-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
7A0G
DownloadVisualize
BU of 7a0g by Molmil
Structure of the SmhB pore of the tripartite alpha-pore forming toxin, Smh, from Serratia marcescens.
Descriptor: SmhB
Authors:Churchill-Angus, A.M, Baker, P.J.
Deposit date:2020-08-08
Release date:2021-03-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (6.979 Å)
Cite:Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
Sci Rep, 11, 2021
6OGS
DownloadVisualize
BU of 6ogs by Molmil
X-ray crystal structure of darunavir-resistant HIV-1 protease (P30) in complex with GRL-001
Descriptor: (3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(3-fluorophenyl)-3-hydroxybutan-2-yl]carbamate, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Bulut, H, Hattori, S.I, Aoki-Ogata, H, Hayashi, H, Aoki, M, Ghosh, A.K, Mitsuya, H.
Deposit date:2019-04-03
Release date:2020-04-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Single atom changes in newly synthesized HIV protease inhibitors reveal structural basis for extreme affinity, high genetic barrier, and adaptation to the HIV protease plasticity.
Sci Rep, 10, 2020
8E55
DownloadVisualize
BU of 8e55 by Molmil
Design of Diverse Asymmetric Pockets in de novo Homo-oligomeric Proteins
Descriptor: SG135
Authors:Gerben, S, Borst, A.J, Baker, D.
Deposit date:2022-08-19
Release date:2023-01-25
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins.
Biochemistry, 62, 2023
7A26
DownloadVisualize
BU of 7a26 by Molmil
Structure of soluble SmhA crystal form 1 of the tripartite alpha-pore forming toxin, Smh, from Serratia marcescens.
Descriptor: CALCIUM ION, CHLORIDE ION, SmhA
Authors:Churchill-Angus, A.M, Baker, P.J.
Deposit date:2020-08-16
Release date:2021-03-31
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
Sci Rep, 11, 2021
7ABO
DownloadVisualize
BU of 7abo by Molmil
Structure of the N318H variant of the reversible pyrrole-2-carboxylic acid decarboxylase PA0254/HudA in complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, MANGANESE (II) ION, SODIUM ION, ...
Authors:Leys, D, Marshall, S.A.
Deposit date:2020-09-08
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and Mechanism of Pseudomonas aeruginosa PA0254/HudA, a prFMN-Dependent Pyrrole-2-carboxylic Acid Decarboxylase Linked to Virulence.
Acs Catalysis, 11, 2021
6OO0
DownloadVisualize
BU of 6oo0 by Molmil
Crystal structure of bovine Fab NC-Cow1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, NC-Cow1 heavy chain, NC-Cow1 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2019-04-22
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of broad HIV neutralization by a vaccine-induced cow antibody.
Sci Adv, 6, 2020
8B6E
DownloadVisualize
BU of 8b6e by Molmil
crystal structure of the DNA-binding short chromatophore-targeted protein sCTP-23166 from Paulinella chromatophora
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, sCTP-23166
Authors:Macorano, L, Applegate, V, Hoeppner, A, Smits, S.H.J, Nowack, E.C.M.
Deposit date:2022-09-27
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:DNA-binding and protein structure of nuclear factors likely acting in genetic information processing in the Paulinella chromatophore.
Proc.Natl.Acad.Sci.USA, 120, 2023
7A9X
DownloadVisualize
BU of 7a9x by Molmil
Structure of yeast Rmd9p in complex with 16nt target RNA
Descriptor: CHLORIDE ION, Protein RMD9, mitochondrial, ...
Authors:Hillen, H.S, Markov, D.A, Ireneusz, W.D, Hofmann, K.B, Cowan, A.T, Jones, J.L, Temiakov, D, Cramer, P, Anikin, M.
Deposit date:2020-09-02
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The pentatricopeptide repeat protein Rmd9 recognizes the dodecameric element in the 3'-UTRs of yeast mitochondrial mRNAs.
Proc.Natl.Acad.Sci.USA, 118, 2021
6WQP
DownloadVisualize
BU of 6wqp by Molmil
GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, Endoglucanase, ...
Authors:Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
Deposit date:2020-04-29
Release date:2020-11-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
7A5U
DownloadVisualize
BU of 7a5u by Molmil
Structure of E37A BlaC from Mycobacterium tuberculosis
Descriptor: Beta-lactamase
Authors:Chikunova, A, Ahmad, M.U, Perrakis, A, Ubbink, M.
Deposit date:2020-08-21
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved residues Glu37 and Trp229 play an essential role in protein folding of beta-lactamase.
Febs J., 288, 2021
7PC5
DownloadVisualize
BU of 7pc5 by Molmil
The third PDZ domain of PDZD7 complexed with the PDZ-binding motif of EXOC4
Descriptor: CALCIUM ION, Exocyst complex component 4, GLYCEROL, ...
Authors:Cousido-Siah, A, Trave, G, Gogl, G.
Deposit date:2021-08-03
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A scalable strategy to solve structures of PDZ domains and their complexes.
Acta Crystallogr D Struct Biol, 78, 2022
7A02
DownloadVisualize
BU of 7a02 by Molmil
Bacillus endospore appendages form a novel family of disulfide-linked pili
Descriptor: DUF3992 domain-containing protein
Authors:Pradhan, B, Liedtke, J, Sleutel, M, Lindback, T, Llarena, A.K, Brynildsrud, O, Aspholm, M, Remaut, H.
Deposit date:2020-08-06
Release date:2021-04-28
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Endospore Appendages: a novel pilus superfamily from the endospores of pathogenic Bacilli.
Embo J., 40, 2021
6UJG
DownloadVisualize
BU of 6ujg by Molmil
Crystal structure of human GAC in complex with inhibitor UPGL00012
Descriptor: Glutaminase kidney isoform, mitochondrial, N-{5-[(3S)-3-{[5-(acetylamino)-1,3,4-thiadiazol-2-yl]amino}pyrrolidin-1-yl]-1,3,4-thiadiazol-2-yl}acetamide
Authors:Huang, Q, Cerione, R.A.
Deposit date:2019-10-03
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human GAC in complex with inhibitor UPGL00012
To Be Published
5I96
DownloadVisualize
BU of 5i96 by Molmil
Crystal Structure of Human Mitochondrial Isocitrate Dehydrogenase (IDH2) R140Q Mutant Homodimer in Complex with AG-221 (Enasidenib) Inhibitor.
Descriptor: 2-methyl-1-[(4-[6-(trifluoromethyl)pyridin-2-yl]-6-{[2-(trifluoromethyl)pyridin-4-yl]amino}-1,3,5-triazin-2-yl)amino]propan-2-ol, ACETATE ION, CALCIUM ION, ...
Authors:Wei, W, Zhang, B, Jin, L, Jiang, F, DeLaBarre, B, Travins, J.A, Padyana, A.K.
Deposit date:2016-02-19
Release date:2017-03-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:AG-221, a First-in-Class Therapy Targeting Acute Myeloid Leukemia Harboring Oncogenic IDH2 Mutations.
Cancer Discov, 7, 2017
6UJA
DownloadVisualize
BU of 6uja by Molmil
Integrin alpha-v beta-8 in complex with pro-TGF-beta1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Campbell, M.G, Cormier, A, Cheng, Y, Nishimura, S.L.
Deposit date:2019-10-02
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM Reveals Integrin-Mediated TGF-beta Activation without Release from Latent TGF-beta.
Cell, 180, 2020
7MHW
DownloadVisualize
BU of 7mhw by Molmil
Crystal structure of the protease inhibitor U-Omp19 from Brucella abortus fused to Maltose-binding protein
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Outer membrane lipoprotein omp19, SULFATE ION
Authors:Darriba, M.L, Klinke, S, Otero, L.H, Cerutti, M.L, Cassataro, J, Pasquevich, K.A.
Deposit date:2021-04-15
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A disordered region retains the full protease inhibitor activity and the capacity to induce CD8 + T cells in vivo of the oral vaccine adjuvant U-Omp19.
Comput Struct Biotechnol J, 20, 2022

223166

數據於2024-07-31公開中

PDB statisticsPDBj update infoContact PDBjnumon