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PDB: 89774 results

7RVK
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BU of 7rvk by Molmil
Segment from Y169G mutant of the human prion protein 169-175 GSNQNNF
Descriptor: ACETATE ION, Major prion protein, ZINC ION
Authors:Glynn, C, Rodriguez, J.A, Hernandez, E.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1 Å)
Cite:Structural and Biophysical Consequences of Sequence Variation in the B2a2 Loop of Mammalian Prions
To be published
7O33
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BU of 7o33 by Molmil
Crystal structure of the anti-PAS Fab 3.1 in complex with its epitope peptide
Descriptor: APSA epitope peptide, anti-PAS Fab 3.1 chimeric heavy chain, anti-PAS Fab 3.1 chimeric light chain
Authors:Schilz, J, Skerra, A.
Deposit date:2021-04-01
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021
6ZDC
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BU of 6zdc by Molmil
Structure of the catalytic domain of human endo-alpha-mannosidase MANEA in complex with nickel
Descriptor: Glycoprotein endo-alpha-1,2-mannosidase, NICKEL (II) ION
Authors:Sobala, L.F, Fernandes, P.Z, Hakki, Z, Thompson, A.J, Howe, J.D, Hill, M, Zitzmann, N, Davies, S, Stamataki, Z, Butters, T.D, Alonzi, D.S, Williams, S.J, Davies, G.J.
Deposit date:2020-06-14
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Structure of human endo-alpha-1,2-mannosidase (MANEA), an antiviral host-glycosylation target.
Proc.Natl.Acad.Sci.USA, 117, 2020
4UU6
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BU of 4uu6 by Molmil
CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ivanova, M.E, Purkiss, A.G, McDonald, N.Q.
Deposit date:2014-07-24
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the human Pals1 PDZ domain with and without ligand suggest gated access of Crb to the PDZ peptide-binding groove.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
3AG7
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BU of 3ag7 by Molmil
An auxilin-like J-domain containing protein, JAC1 J-domain
Descriptor: Putative uncharacterized protein F9E10.5
Authors:Takano, A.
Deposit date:2010-03-24
Release date:2010-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and functional analyses of J-domain of JAC1 essential for chloroplast photorelocation movement in Arabidopsis thaliana
Plant Cell.Physiol., 51, 2010
5J0K
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BU of 5j0k by Molmil
De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
Descriptor: designed protein 2L4HC2_23
Authors:Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G.
Deposit date:2016-03-28
Release date:2016-05-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
6ZJN
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BU of 6zjn by Molmil
Respiratory complex I from Thermus thermophilus, NADH dataset, minor state
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, NADH-quinone oxidoreductase subunit 1, ...
Authors:Kaszuba, K, Tambalo, M, Gallagher, G.T, Sazanov, L.A.
Deposit date:2020-06-29
Release date:2020-09-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
1K7J
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BU of 1k7j by Molmil
Structural Genomics, protein TF1
Descriptor: Protein yciO, SULFATE ION
Authors:Zhang, R, Dementieva, I, Thorn, J, Donnelly, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-19
Release date:2002-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Genomics, protein TF1
To be Published
5J1W
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BU of 5j1w by Molmil
Crystal structure of human CLK1 in complex with pyrido[3,4-g]quinazoline derivative ZW31 (compound 14)
Descriptor: Dual specificity protein kinase CLK1, GLYCEROL, PHOSPHATE ION, ...
Authors:Chaikuad, A, Esvan, Y.J, Zeinyeh, W, Boibessot, T, Nauton, L, Thery, V, Loaec, N, Meijer, L, Giraud, F, Moreau, P, Anizon, F, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-03-29
Release date:2016-05-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Discovery of pyrido[3,4-g]quinazoline derivatives as CMGC family protein kinase inhibitors: Design, synthesis, inhibitory potency and X-ray co-crystal structure.
Eur.J.Med.Chem., 118, 2016
7OBQ
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BU of 7obq by Molmil
SRP-SR at the distal site conformation
Descriptor: EM14S01-3B_G0054400.mRNA.1.CDS.1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Jomaa, A, Ban, N.
Deposit date:2021-04-23
Release date:2021-07-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular mechanism of cargo recognition and handover by the mammalian signal recognition particle.
Cell Rep, 36, 2021
6Z4U
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BU of 6z4u by Molmil
X-ray Crystallographic Structure of Orf9b from SARS-CoV-2
Descriptor: POLYETHYLENE GLYCOL (N=34), Protein 9b
Authors:Weeks, S.D, De Graef, S, Munawar, A.
Deposit date:2020-05-25
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:X-ray Crystallographic Structure of Orf9b from SARS-CoV-2
To Be Published
5J23
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BU of 5j23 by Molmil
Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc04462 (SmGhrB) from Sinorhizobium meliloti in complex with 2'-phospho-ADP-ribose
Descriptor: 2-hydroxyacid dehydrogenase, ACETATE ION, CHLORIDE ION, ...
Authors:Shabalin, I.G, Gasiorowska, O.A, Handing, K.B, Bonanno, J, Kutner, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-03-29
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
8BBZ
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BU of 8bbz by Molmil
Crystal Structure of SilF (apo form)
Descriptor: SilF, ZINC ION
Authors:Lithgo, R.M, Carr, S.B, Quigley, A.M, Scott, D.J.
Deposit date:2022-10-14
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of SilF (apo form)
To Be Published
6ZCW
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BU of 6zcw by Molmil
Crystal structure of lanthanide-dependent alcohol dehydrogenase PedH from Pseudomonas putida KT2440
Descriptor: PRASEODYMIUM ION, PYRROLOQUINOLINE QUINONE, Quinoprotein ethanol dehydrogenase
Authors:Bange, G, Lepak, A, Elsayed, E.M.
Deposit date:2020-06-12
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Engineered PQQ-Dependent Alcohol Dehydrogenase for the Oxidation of 5-(Hydroxymethyl)furoic Acid
Acs Catalysis, 10, 2020
7OGT
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BU of 7ogt by Molmil
Folded elbow of cohesin
Descriptor: Structural maintenance of chromosomes protein 1, Structural maintenance of chromosomes protein 3
Authors:Lee, B.-G, Gonzalez Llamazares, A, Collier, J, Patele, N.J, Nasmyth, K.A, Lowe, J.
Deposit date:2021-05-07
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Folding of cohesin's coiled coil is important for Scc2/4-induced association with chromosomes.
Elife, 10, 2021
6ZJL
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BU of 6zjl by Molmil
Respiratory complex I from Thermus thermophilus, NAD+ dataset, major state
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kaszuba, K, Tambalo, M, Gallagher, G.T, Sazanov, L.A.
Deposit date:2020-06-29
Release date:2020-09-02
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
4W1T
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BU of 4w1t by Molmil
Structure of the Ssl1 laccase mutant H99Y with depleted type-2 copper ion
Descriptor: COPPER (II) ION, Copper oxidase, GLYCEROL
Authors:Gunne, M, Hoeppner, A, Jaeger, V.D, Urlacher, V.B.
Deposit date:2014-08-14
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the Ssl1 laccase mutant H99Y with depleted type-2 copper ion
To Be Published
7O0A
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BU of 7o0a by Molmil
Bdellovibrio bacteriovorus PGI in P1211 spacegroup
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Glucose-6-phosphate isomerase
Authors:Meek, R.W, Lovering, A.L.
Deposit date:2021-03-26
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Bdellovibrio bacteriovorus phosphoglucose isomerase structures reveal novel rigidity in the active site of a selected subset of enzymes upon substrate binding.
Open Biology, 11, 2021
5JD3
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BU of 5jd3 by Molmil
Crystal structure of LAE5, an alpha/beta hydrolase enzyme from the metagenome of Lake Arreo, Spain
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, LAE5, ...
Authors:Stogios, P.J, Xu, X, Nocek, B, Cui, H, Yim, V, Martinez-Martinez, M, Alcaide, M, Ferrer, M, Savchenko, A.
Deposit date:2016-04-15
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:To be published
To Be Published
5JH2
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BU of 5jh2 by Molmil
Crystal structure of the holo form of AKR4C7 from maize
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-2'-5'-DIPHOSPHATE, Aldose reductase, ...
Authors:Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T.
Deposit date:2016-04-20
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases.
Biochem.Biophys.Res.Commun., 474, 2016
7NSS
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BU of 7nss by Molmil
Bdellovibrio bacteriovorus PGI in P3121 spacegroup
Descriptor: 1,2-ETHANEDIOL, Glucose-6-phosphate isomerase
Authors:Meek, R.W, Lovering, A.L.
Deposit date:2021-03-08
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Bdellovibrio bacteriovorus phosphoglucose isomerase structures reveal novel rigidity in the active site of a selected subset of enzymes upon substrate binding.
Open Biology, 11, 2021
8BHU
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BU of 8bhu by Molmil
Crystal Structure of SilF (Ag(I) form
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SILVER ION, SULFATE ION, ...
Authors:Lithgo, R.M, Carr, S.B, Quigley, A.M, Scott, D.J.
Deposit date:2022-11-01
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of SilF (apo form)
To Be Published
5JFC
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BU of 5jfc by Molmil
NADH-dependent Ferredoxin:NADP Oxidoreductase (NfnI) from Pyrococcus furiosus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Zadvornyy, O.A, Schut, G.J, Nguyen, D.M, Artz, J.H, Tokmina-Lukaszewska, M, Lipscomb, G, King, P.W, Adams, M.W, Peters, J.W.
Deposit date:2016-04-19
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Mechanistic insights into energy conservation by flavin-based electron bifurcation.
Nat. Chem. Biol., 13, 2017
3AKN
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BU of 3akn by Molmil
X-ray structure of iFABP from human and rat with bound fluorescent fatty acid analogue
Descriptor: 11-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)undecanoic acid, Fatty acid-binding protein, intestinal
Authors:Wielens, J, Laguerre, A.J.K, Parker, M.W, Scanlon, M.J.
Deposit date:2010-07-14
Release date:2011-07-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of human and rat intestinal fatty acid binding protein in complex with 11-(Dansylamino)undecanoic acid
To be Published
5J0D
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BU of 5j0d by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with a benzoxazepine compound
Descriptor: 1,2-ETHANEDIOL, 7-(3,5-dimethoxyphenyl)-N-[(3S)-1-methylpiperidin-3-yl]-4-propanoyl-2,3,4,5-tetrahydro-1,4-benzoxazepine-9-carboxamide, CREB-binding protein
Authors:Tallant, C, Popp, T.A, Fedorov, O, Siejka, P, Picaud, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bracher, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-03-28
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Development of Selective CBP/P300 Benzoxazepine Bromodomain Inhibitors.
J.Med.Chem., 59, 2016

227111

数据于2024-11-06公开中

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