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PDB: 88608 results

3X3H
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BU of 3x3h by Molmil
Crystal Structure of the Manihot esculenta Hydroxynitrile Lyase (MeHNL) 3KP (K176P, K199P, K224P) triple mutant
Descriptor: (S)-hydroxynitrile lyase
Authors:Cielo, C.B.C, Yamane, T, Asano, Y, Dadashipour, M, Suzuki, A, Mizushima, T, Komeda, H, Okazaki, S.
Deposit date:2015-01-21
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystallographic Studies of Manihot esculenta hydroxynitrile lyase Lysine-to-Proline mutants
TO BE PUBLISHED
4RD5
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BU of 4rd5 by Molmil
Crystal structure of R.NgoAVII restriction endonuclease B3 domain with cognate DNA
Descriptor: DNA (5'-D(*CP*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*GP*G)-3'), Restriction endonuclease R.NgoVII
Authors:Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
Deposit date:2014-09-18
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
6IKG
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BU of 6ikg by Molmil
Crystal structure of substrate-bound S9 peptidase (S514A mutant) from Deinococcus radiodurans
Descriptor: Acyl-peptide hydrolase, putative, GLYCEROL, ...
Authors:Yadav, P, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-10-16
Release date:2018-11-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
6W75
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BU of 6w75 by Molmil
1.95 Angstrom Resolution Crystal Structure of NSP10 - NSP16 Complex from SARS-CoV-2
Descriptor: 2'-O-methyltransferase, FORMIC ACID, Non-structural protein 10, ...
Authors:Minasov, G, Shuvalova, L, Rosas-Lemus, M, Kiryukhina, O, Wiersum, G, Godzik, A, Jaroszewski, L, Stogios, P.J, Skarina, T, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-03-18
Release date:2020-03-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design.
Sci.Signal., 13, 2020
7TEW
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BU of 7tew by Molmil
Cryo-EM structure of SARS-CoV-2 Delta (B.1.617.2) spike protein in complex with human ACE2 (focused refinement of RBD and ACE2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Zhu, X, Saville, J.W, Mannar, D, Srivastava, S.S, Berezuk, A.M, Demers, J.P, Zhou, S, Tuttle, K.S, Subramaniam, S.
Deposit date:2022-01-06
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural and biochemical rationale for enhanced spike protein fitness in delta and kappa SARS-CoV-2 variants.
Nat Commun, 13, 2022
7TEZ
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BU of 7tez by Molmil
Cryo-EM structure of SARS-CoV-2 Kappa (B.1.617.1) spike protein in complex with human ACE2 (focused refinement of RBD and ACE2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Zhu, X, Saville, J.W, Mannar, D, Srivastava, S.S, Berezuk, A.M, Demers, J.P, Zhou, S, Tuttle, K.S, Subramaniam, S.
Deposit date:2022-01-06
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Structural and biochemical rationale for enhanced spike protein fitness in delta and kappa SARS-CoV-2 variants.
Nat Commun, 13, 2022
4IM9
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BU of 4im9 by Molmil
Cystal structure of DnaG primase C-terminal domain from Vibrio cholerae
Descriptor: DNA primase
Authors:Abdul Rehman, S.A, Tarique, K.F, Gourinath, S.
Deposit date:2013-01-02
Release date:2014-05-07
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Cystal structure of DnaG primase C-terminal domain from Vibrio cholerae
To be Published
4RCK
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BU of 4rck by Molmil
Crystal Structure of Uncharacterized Membrane Spanning Protein from Vibrio fischeri
Descriptor: Hypothetical membrane spanning protein, MAGNESIUM ION
Authors:Kim, Y, Tesar, C, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-16
Release date:2014-11-26
Method:X-RAY DIFFRACTION (2.999 Å)
Cite:Crystal Structure of Uncharacterized Membrane Spanning Protein from Vibrio fischeri
To be Published
7T3T
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BU of 7t3t by Molmil
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the active state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Schmitz, E.A, Takahashi, H, Karakas, E.
Deposit date:2021-12-08
Release date:2022-03-23
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
7T3U
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BU of 7t3u by Molmil
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the inactive state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Schmitz, E.A, Takahashi, H, Karakas, E.
Deposit date:2021-12-08
Release date:2022-03-23
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
7T3R
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BU of 7t3r by Molmil
IP3 and ATP bound type 3 IP3 receptor in the pre-active C state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 3, ...
Authors:Schmitz, E.A, Takahashi, H, Karakas, E.
Deposit date:2021-12-08
Release date:2022-03-23
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
6IRU
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BU of 6iru by Molmil
Crystal structure of Peptidase E from Deinococcus radiodurans in P6422 space group
Descriptor: peptidase DR_1070
Authors:Yadav, P, Chandravanshi, K, Kumar, A, Makde, R.D.
Deposit date:2018-11-14
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic triad heterogeneity in S51 peptidase family: Structural basis for functional variability.
Proteins, 87, 2019
2IPT
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BU of 2ipt by Molmil
PFA1 Fab Fragment
Descriptor: ACETAMIDE, IgG2a Fab fragment Heavy Chain, IgG2a Fab fragment Light Chain Kappa
Authors:Gardberg, A.S, Dealwis, C.
Deposit date:2006-10-12
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for passive immunotherapy of Alzheimer's disease
Proc.Natl.Acad.Sci.Usa, 104, 2007
2IQQ
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BU of 2iqq by Molmil
The Crystal Structure of Iron, Sulfur-Dependent L-serine dehydratase from Legionella pneumophila subsp. pneumophila
Descriptor: Iron, Sulfur-Dependent L-serine dehydratase, MAGNESIUM ION
Authors:Kim, Y, Hatzos, C, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-10-14
Release date:2006-11-14
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The Crystal Structure of Iron, Sulfur-Dependent L-serine dehydratase from Legionella pneumophila subsp. pneumophila
To be Published
2J8B
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BU of 2j8b by Molmil
High resolution structure of human CD59
Descriptor: CD59 GLYCOPROTEIN
Authors:Leath, K.J, Johnson, S, Roversi, P, Morgan, B.P, Smith, R.A.G, Lea, S.M.
Deposit date:2006-10-24
Release date:2007-08-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:High-Resolution Structures of Bacterially Expressed Soluble Human Cd59.
Acta Crystallogr.,Sect.F, 63, 2007
6IZ5
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BU of 6iz5 by Molmil
Crystal Structure Analysis of a Eukaryotic Membrane Protein
Descriptor: Trimeric intracellular cation channel type B-B
Authors:Li, D, Su, M, Hendrickson, W.A, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.701 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
7SOM
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BU of 7som by Molmil
Ciliary C2 central pair apparatus isolated from Chlamydomonas reinhardtii
Descriptor: Cilia- and flagella-associated protein 20, FAP147, FAP178, ...
Authors:Gui, M, Wang, X, Dutcher, S.K, Brown, A, Zhang, R.
Deposit date:2021-11-01
Release date:2022-04-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ciliary central apparatus structure reveals mechanisms of microtubule patterning.
Nat.Struct.Mol.Biol., 29, 2022
3EEB
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BU of 3eeb by Molmil
Structure of the V. cholerae RTX cysteine protease domain
Descriptor: INOSITOL HEXAKISPHOSPHATE, RTX toxin RtxA, SODIUM ION
Authors:Lupardus, P.J, Shen, A, Bogyo, M, Garcia, K.C.
Deposit date:2008-09-04
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small molecule-induced allosteric activation of the Vibrio cholerae RTX cysteine protease domain
Science, 322, 2008
4RGT
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BU of 4rgt by Molmil
2.0 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus in Complex with 3-N-Acetylneuraminyl-N-acetyllactosamine.
Descriptor: DI(HYDROXYETHYL)ETHER, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Putative uncharacterized protein
Authors:Minasov, G, Nocadello, S, Shuvalova, L, Filippova, E.V, Halavaty, A, Dubrovska, I, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-09-30
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.0 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus in Complex with 3-N-Acetylneuraminyl-N-acetyllactosamine.
TO BE PUBLISHED
5CYU
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BU of 5cyu by Molmil
Structure of the soluble domain of EccB1 from the Mycobacterium smegmatis ESX-1 secretion system.
Descriptor: Conserved membrane protein
Authors:Arbing, M.A, Chan, S, Kahng, S, Kim, J, Eisenberg, D.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-07-30
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Structures of EccB1 and EccD1 from the core complex of the mycobacterial ESX-1 type VII secretion system.
Bmc Struct.Biol., 16, 2016
4RGV
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BU of 4rgv by Molmil
Crystal structure of the Methanocaldococcus jannaschii G1PDH
Descriptor: Glycerol-1-phosphate dehydrogenase, MAGNESIUM ION, ZINC ION
Authors:Carbone, V, Ronimus, R.S, Schofield, L.R, Sutherland-Smith, A.J.
Deposit date:2014-09-30
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure and Evolution of the Archaeal Lipid Synthesis Enzyme sn-Glycerol-1-phosphate Dehydrogenase.
J.Biol.Chem., 290, 2015
4RH5
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BU of 4rh5 by Molmil
Crystal structure of PTPN3 (PTPH1) in complex with Eps15 pTyr849 peptide
Descriptor: Epidermal growth factor receptor substrate 15, Tyrosine-protein phosphatase non-receptor type 3
Authors:Chen, K.-E, Meng, T.C, Wang, A.H.-J.
Deposit date:2014-10-01
Release date:2015-03-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate specificity and plasticity of FERM-containing protein tyrosine phosphatases.
Structure, 23, 2015
7T6M
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BU of 7t6m by Molmil
Cryo-EM structure of TRPV5 in nanodiscs with PI(4,5)P2 at pH6 state 1
Descriptor: Transient receptor potential cation channel subfamily V member 5, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Fluck, E.C, Yazici, A.T, Rohacs, T, Moiseenkova-Bell, V.Y.
Deposit date:2021-12-14
Release date:2022-05-04
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of TRPV5 regulation by physiological and pathophysiological modulators.
Cell Rep, 39, 2022
7T6J
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BU of 7t6j by Molmil
Cryo-EM structure of TRPV5 at pH8 in nanodiscs
Descriptor: Transient receptor potential cation channel subfamily V member 5
Authors:Fluck, E.C, Yazici, A.T, Rohacs, T, Moiseenkova-Bell, V.Y.
Deposit date:2021-12-14
Release date:2022-05-04
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of TRPV5 regulation by physiological and pathophysiological modulators.
Cell Rep, 39, 2022
4RH9
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BU of 4rh9 by Molmil
Crystal structure of PTPN3 (PTPH1) H812F, M883G mutant in complex with Eps15 pTyr849 peptide
Descriptor: Epidermal growth factor receptor substrate 15, Tyrosine-protein phosphatase non-receptor type 3
Authors:Chen, K.-E, Meng, T.C, Wang, A.H.-J.
Deposit date:2014-10-01
Release date:2015-03-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Substrate specificity and plasticity of FERM-containing protein tyrosine phosphatases.
Structure, 23, 2015

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