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PDB: 88608 results

4RII
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Chimeric Glycosyltransferase LanGT2S8Ac, TDP complex
Descriptor: Glycosyl transferase homolog,Glycosyl transferase, MAGNESIUM ION, THYMIDINE-5'-DIPHOSPHATE
Authors:Tam, H.K, Gerhardt, S, Breit, B, Bechthold, A, Einsle, O.
Deposit date:2014-10-06
Release date:2015-01-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of O- and C-Glycosylating Variants of the Landomycin Glycosyltransferase LanGT2.
Angew.Chem.Int.Ed.Engl., 54, 2015
7TC4
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BU of 7tc4 by Molmil
Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 15/16
Descriptor: 3C-like proteinase, GLYCEROL, Nonstructural protein 15/16
Authors:Shaqra, A.M, Schiffer, C.A.
Deposit date:2021-12-22
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Defining the substrate envelope of SARS-CoV-2 main protease to predict and avoid drug resistance.
Nat Commun, 13, 2022
6J2Z
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BU of 6j2z by Molmil
AtFKBP53 N-terminal Nucleoplasmin Domain
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP53
Authors:Singh, A.K, Vasudevan, D.
Deposit date:2019-01-03
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:AtFKBP53: a chimeric histone chaperone with functional nucleoplasmin and PPIase domains.
Nucleic Acids Res., 48, 2020
7T8M
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BU of 7t8m by Molmil
Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 5/6
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Shaqra, A.M, Schiffer, C.A.
Deposit date:2021-12-16
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Defining the substrate envelope of SARS-CoV-2 main protease to predict and avoid drug resistance.
Nat Commun, 13, 2022
7ZSK
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BU of 7zsk by Molmil
K3DAK4 bimodule core of BGC11 from Brevibacillus brevis.
Descriptor: Putative polyketide synthase
Authors:Tittes, Y.U, Herbst, D.A, Jakob, R.P, Maier, T.
Deposit date:2022-05-07
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:The structure of a polyketide synthase bimodule core.
Sci Adv, 8, 2022
1T5N
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BU of 1t5n by Molmil
Structural transitions as determinants of calcium-dependent antibiotic daptomycin
Descriptor: DAPTOMYCIN, DECANOIC ACID
Authors:Jung, D, Rozek, A, Okon, M, Hancock, R.E.
Deposit date:2004-05-04
Release date:2004-08-31
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Structural Transitions as Determinants of the Action of the Calcium-Dependent Antibiotic Daptomycin.
Chem.Biol., 11, 2004
3EUG
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI URACIL DNA GLYCOSYLASE AND ITS COMPLEXES WITH URACIL AND GLYCEROL: STRUCTURE AND GLYCOSYLASE MECHANISM REVISITED
Descriptor: GLYCEROL, PROTEIN (GLYCOSYLASE)
Authors:Xiao, G, Tordova, M, Jagadeesh, J, Drohat, A.C, Stivers, J.T, Gilliland, G.L.
Deposit date:1998-10-13
Release date:1999-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited.
Proteins, 35, 1999
1TCZ
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BU of 1tcz by Molmil
Crystal structure of a truncated version of the phage lamda protein gpD
Descriptor: Head decoration protein
Authors:Chang, C, Plueckthun, A, Wlodawer, A.
Deposit date:2004-05-21
Release date:2004-06-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a truncated version of the phage lambda protein gpD.
Proteins, 57, 2004
2J57
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BU of 2j57 by Molmil
X-ray reduced Paraccocus denitrificans methylamine dehydrogenase N- quinol in complex with amicyanin.
Descriptor: AMICYANIN, COPPER (II) ION, METHYLAMINE DEHYDROGENASE HEAVY CHAIN, ...
Authors:Pearson, A.R, Pahl, R, Davidson, V.L, Wilmot, C.M.
Deposit date:2006-09-12
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Tracking X-Ray-Derived Redox Changes in Crystals of a Methylamine Dehydrogenase/Amicyanin Complex Using Single-Crystal Uv/Vis Microspectrophotometry.
J.Synchrotron Radiat., 14, 2007
3ERR
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BU of 3err by Molmil
Microtubule binding domain from mouse cytoplasmic dynein as a fusion with seryl-tRNA synthetase
Descriptor: ADENOSINE MONOPHOSPHATE, fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA synthetase from Thermus thermophilus
Authors:Carter, A.P.
Deposit date:2008-10-03
Release date:2008-11-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure and functional role of dynein's microtubule-binding domain.
Science, 322, 2008
3ESV
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BU of 3esv by Molmil
Crystal structure of the engineered neutralizing antibody M18
Descriptor: Antibody M18 light chain and antibody M18 heavy chain linked with a synthetic (GGGGS)4 linker
Authors:Monzingo, A.F, Leysath, C.E, Barnett, J, Iverson, B.L, Georgiou, G, Robertus, J.D.
Deposit date:2008-10-06
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the engineered neutralizing antibody m18 complexed to domain 4 of the anthrax protective antigen.
J.Mol.Biol., 387, 2009
3ET9
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BU of 3et9 by Molmil
Crystal structure of the engineered neutralizing antibody 1H
Descriptor: Antibody 1H light chain and antibody 1H heavy chain linked with a synthetic (GGGGS)4 linker
Authors:Leysath, C.E, Monzingo, A.F, Barnett, J, Iverson, B.L, Georgiou, G, Robertus, J.D.
Deposit date:2008-10-07
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the engineered neutralizing antibody m18 complexed to domain 4 of the anthrax protective antigen.
J.Mol.Biol., 387, 2009
1T9Z
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BU of 1t9z by Molmil
Three-dimensional structure of a RNA-polymerase II binding protein.
Descriptor: CITRIC ACID, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, MAGNESIUM ION
Authors:Kamenski, T, Heilmeier, S, Meinhart, A, Cramer, P.
Deposit date:2004-05-19
Release date:2004-08-31
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Mechanism of RNA Polymerase II CTD Phosphatases.
Mol.Cell, 15, 2004
1TKY
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BU of 1tky by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with seryl-3'-aminoadenosine
Descriptor: SERINE-3'-AMINOADENOSINE, Threonyl-tRNA synthetase
Authors:Dock-Bregeon, A.C, Rees, B, Torres-Larios, A, Bey, G, Caillet, J, Moras, D.
Deposit date:2004-06-09
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Achieving Error-Free Translation; The Mechanism of Proofreading of Threonyl-tRNA Synthetase at Atomic Resolution.
Mol.Cell, 16, 2004
1TJN
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BU of 1tjn by Molmil
Crystal structure of hypothetical protein af0721 from Archaeoglobus fulgidus
Descriptor: Sirohydrochlorin cobaltochelatase
Authors:Yin, J, Xu, X.L, Cuff, M, Walker, J.R, Edwards, A, Savchenko, A, James, M.N.G, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-06-06
Release date:2004-09-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of af0721: a hypothetical protein bearing sequence similarity with class II chelatases in cobalamin synthesis
To be Published
4RY1
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BU of 4ry1 by Molmil
Crystal structure of periplasmic solute binding protein ECA2210 from Pectobacterium atrosepticum SCRI1043, Target EFI-510858
Descriptor: ACETATE ION, GLYCEROL, Periplasmic solute binding protein
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Morisco, L.L, Wasserman, S.R, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Hillerich, B, Siedel, R.D, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-12-12
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of periplasmic solute binding protein ECA2210 from Pectobacterium atrosepticum, Target EFI-510858
To be Published
1T0P
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BU of 1t0p by Molmil
Structural Basis of ICAM recognition by integrin alpahLbeta2 revealed in the complex structure of binding domains of ICAM-3 and alphaLbeta2 at 1.65 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin alpha-L, Intercellular adhesion molecule-3, ...
Authors:Song, G, Yang, Y.T, Liu, J.H, Shimaoko, M, Springer, T.A, Wang, J.H.
Deposit date:2004-04-12
Release date:2005-03-08
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:An atomic resolution view of ICAM recognition in a complex between the binding domains of ICAM-3 and integrin alphaLbeta2.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4RYQ
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BU of 4ryq by Molmil
Crystal structure of BcTSPO, type 2 at 1.7 Angstrom
Descriptor: Integral membrane protein, [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
Authors:Guo, Y, Liu, Q, Hendrickson, W.A, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-12-16
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Protein structure. Structure and activity of tryptophan-rich TSPO proteins.
Science, 347, 2015
3EYM
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BU of 3eym by Molmil
Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Descriptor: 2-tert-butylbenzene-1,4-diol, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Authors:Russell, R.J, Kerry, P.S, Stevens, D.A, Steinhauer, D.A, Martin, S.R, Gamblin, S.J, Skehel, J.J.
Deposit date:2008-10-21
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of influenza hemagglutinin in complex with an inhibitor of membrane fusion
Proc.Natl.Acad.Sci.USA, 105, 2008
3EZE
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BU of 3eze by Molmil
COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI NMR, RESTRAINED REGULARIZED MEAN STRUCTURE
Descriptor: PHOSPHITE ION, PROTEIN (PHOSPHOTRANSFERASE SYSTEM, ENZYME I), ...
Authors:Clore, G.M, Garrett, D.S, Gronenborn, A.M.
Deposit date:1998-11-04
Release date:1998-12-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the 40,000 Mr phosphoryl transfer complex between the N-terminal domain of enzyme I and HPr.
Nat.Struct.Biol., 6, 1999
7T1C
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BU of 7t1c by Molmil
Crystal structure of RUBISCO from Sulfurivirga caldicuralii
Descriptor: Ribulose-bisphosphate carboxylase
Authors:Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
Deposit date:2021-12-01
Release date:2022-09-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
1TBX
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BU of 1tbx by Molmil
Crystal structure of SSV1 F-93
Descriptor: Hypothetical 11.0 kDa protein
Authors:Kraft, P, Oeckinghaus, A, Kummel, D, Gauss, G.H, Wiedenheft, B, Young, M, Lawrence, C.M.
Deposit date:2004-05-20
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of F-93 from Sulfolobus spindle-shaped virus 1, a winged-helix DNA binding protein.
J.Virol., 78, 2004
2IOF
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BU of 2iof by Molmil
Crystal structure of phosphonoacetaldehyde hydrolase with sodium borohydride-reduced substrate intermediate
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Phosphonoacetaldehyde hydrolase
Authors:Allen, K.A, Lahiri, S.D, Zhang, G, Dunaway-Mariano, D.
Deposit date:2006-10-10
Release date:2007-07-17
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Diversification of function in the haloacid dehalogenase enzyme superfamily: The role of the cap domain in hydrolytic phosphoruscarbon bond cleavage.
Bioorg.Chem., 34, 2006
1T6F
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BU of 1t6f by Molmil
Crystal Structure of the Coiled-coil Dimerization Motif of Geminin
Descriptor: Geminin
Authors:Thepaut, M, Maiorano, D, Guichou, J.-F, Auge, M.-T, Dumas, C, Mechali, M, Padilla, A.
Deposit date:2004-05-06
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal Structure of the Coiled-coil Dimerization Motif of Geminin: Structural and Functional Insights on DNA Replication Regulation
J.Mol.Biol., 342, 2004
7TGM
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Crystal structure of HSC-AMS bound DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
Descriptor: 4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanoic acid, Desferrioxamine synthetase DesD, GLYCEROL, ...
Authors:Patel, K.D, Gulick, A.M.
Deposit date:2022-01-07
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An acyl-adenylate mimic reveals the structural basis for substrate recognition by the iterative siderophore synthetase DesD.
J.Biol.Chem., 298, 2022

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