Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89472 results

4MPX
DownloadVisualize
BU of 4mpx by Molmil
Human beta-tryptase co-crystal structure with [(1,1,3,3-tetramethyldisiloxane-1,3-diyl)di-1-benzothiene-4,2-diyl]bis({4-[3-(aminomethyl)phenyl]piperidin-1-yl}methanone)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, SULFATE ION, ...
Authors:White, A, Stein, A.J, Suto, R.
Deposit date:2013-09-13
Release date:2015-03-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Target-directed self-assembly of homodimeric drugs
To be Published
7Z2D
DownloadVisualize
BU of 7z2d by Molmil
Cryo-EM structure of HIV-1 reverse transcriptase with a DNA aptamer in complex with rilpivirine
Descriptor: 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, DNA (38-MER), Reverse transcriptase/ribonuclease H
Authors:Singh, A.K, Das, K.
Deposit date:2022-02-26
Release date:2022-07-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Cryo-EM structures of wild-type and E138K/M184I mutant HIV-1 RT/DNA complexed with inhibitors doravirine and rilpivirine.
Proc.Natl.Acad.Sci.USA, 119, 2022
4J4F
DownloadVisualize
BU of 4j4f by Molmil
Structure of P51G Cyanovirin-N swapped tetramer in the P212121 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
2D8Q
DownloadVisualize
BU of 2d8q by Molmil
Solution structure of the MYND domain of the human zinc finger MYND domain-containing protein 10
Descriptor: ZINC ION, Zinc finger MYND domain containing protein 10
Authors:Miyamoto, K, Kigawa, T, Tomizawa, T, Tochio, N, Sasagawa, A, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-06-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the MYND domain of the human zinc finger MYND domain-containing protein 10
To be Published
4MTL
DownloadVisualize
BU of 4mtl by Molmil
Human Methyltransferase-Like Protein 21C
Descriptor: Protein-lysine methyltransferase METTL21C, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN ATOM OR ION
Authors:Hong, B.S, Tempel, W, Dong, A, Li, Y, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2013-09-19
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Human Methyltransferase-Like Protein 21C
To be Published
5CON
DownloadVisualize
BU of 5con by Molmil
X-ray crystal structure of wild type HIV-1 protease in complex with GRL-015
Descriptor: (3R,3aS,4S,7aS)-3-hydroxyhexahydro-4H-furo[2,3-b]pyran-4-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, HIV-1 protease
Authors:Yedidi, R.S, Hayashi, H, Aoki, M, Das, D, Ghosh, A.K, Mitsuya, H.
Deposit date:2015-07-20
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:C-5-Modified Tetrahydropyrano-Tetrahydofuran-Derived Protease Inhibitors (PIs) Exert Potent Inhibition of the Replication of HIV-1 Variants Highly Resistant to Various PIs, including Darunavir.
J.Virol., 90, 2015
7Z29
DownloadVisualize
BU of 7z29 by Molmil
Cryo-EM structure of NNRTI resistant M184I/E138K mutant HIV-1 reverse transcriptase with a DNA aptamer in complex with nevirapine
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, DNA (38-MER), Reverse transcriptase/ribonuclease H, ...
Authors:Singh, A.K, Das, K.
Deposit date:2022-02-26
Release date:2022-07-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Cryo-EM structures of wild-type and E138K/M184I mutant HIV-1 RT/DNA complexed with inhibitors doravirine and rilpivirine.
Proc.Natl.Acad.Sci.USA, 119, 2022
7JUO
DownloadVisualize
BU of 7juo by Molmil
CBP bromodomain complexed with YF2-23
Descriptor: CREB-binding protein, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(1-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-3-yl)-1H-indol-4-yl}ethanesulfonamide
Authors:Ratia, K.M, Xiong, R, Principe, D, Li, Y, Huang, F, Rana, A, Thatcher, G.
Deposit date:2020-08-20
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:XP-524 is a dual-BET/EP300 inhibitor that represses oncogenic KRAS and potentiates immune checkpoint inhibition in pancreatic cancer.
Proc.Natl.Acad.Sci.USA, 119, 2022
5VFG
DownloadVisualize
BU of 5vfg by Molmil
Synaptotagmin 1 C2B domain, lead-bound (high occupancy)
Descriptor: LEAD (II) ION, Synaptotagmin-1
Authors:Taylor, A.B, Hart, P.J, Igumenova, T.I.
Deposit date:2017-04-07
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:High affinity interactions of Pb2+with synaptotagmin I.
Metallomics, 10, 2018
3WLC
DownloadVisualize
BU of 3wlc by Molmil
Crystal structure of dimeric GCaMP6m
Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
Authors:Ding, J, Luo, A.F, Hu, L.Y, Wang, D.C, Shao, F.
Deposit date:2013-11-08
Release date:2014-01-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 57, 2014
7Z2E
DownloadVisualize
BU of 7z2e by Molmil
Cryo-EM structure of NNRTI resistant M184I/E138K mutant HIV-1 reverse transcriptase with a DNA aptamer in complex with rilpivirine
Descriptor: 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, DNA (38-MER), Reverse transcriptase/ribonuclease H, ...
Authors:Singh, A.K, Das, K.
Deposit date:2022-02-26
Release date:2022-07-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Cryo-EM structures of wild-type and E138K/M184I mutant HIV-1 RT/DNA complexed with inhibitors doravirine and rilpivirine.
Proc.Natl.Acad.Sci.USA, 119, 2022
3KF8
DownloadVisualize
BU of 3kf8 by Molmil
Crystal structure of C. tropicalis Stn1-ten1 complex
Descriptor: Protein stn1, Protein ten1
Authors:Sun, J, Yu, E.Y, Yang, Y.T, Confer, L.A, Sun, S.H, Wan, K, Lue, N.F, Lei, M.
Deposit date:2009-10-27
Release date:2009-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres.
Genes Dev., 23, 2009
4MYM
DownloadVisualize
BU of 4mym by Molmil
Crystal structure of a glyoxalase/ bleomycin resistance protein/ dioxygenase from Nocardioides
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glyoxalase/bleomycin resistance protein/dioxygenase
Authors:Eswaramoorthy, S, Chamala, S, Evans, B, Foti, F, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, AL Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-09-27
Release date:2013-12-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a glyoxalase/ bleomycin resistance protein/ dioxygenase from Nocardioides.
To be Published
5CDL
DownloadVisualize
BU of 5cdl by Molmil
Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
Deposit date:2015-07-04
Release date:2016-08-10
Last modified:2018-07-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
To Be Published
5OVL
DownloadVisualize
BU of 5ovl by Molmil
crystal structure of MabA bound to NADP+ from M. smegmatis
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase FabG, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kussau, T, Van Wyk, N, Viljoen, A, Olieric, V, Flipo, M, Kremer, L, Blaise, M.
Deposit date:2017-08-29
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural rearrangements occurring upon cofactor binding in the Mycobacterium smegmatis beta-ketoacyl-acyl carrier protein reductase MabA.
Acta Crystallogr D Struct Biol, 74, 2018
4N0D
DownloadVisualize
BU of 4n0d by Molmil
Crystal structure of the K345L variant of the Gi alpha1 subunit bound to GTPgammaS
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, MAGNESIUM ION, ...
Authors:Thaker, T.M, Preininger, A.M, Sarwar, M, Hamm, H.E, Iverson, T.M.
Deposit date:2013-10-01
Release date:2014-03-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Transient Interaction between the Phosphate Binding Loop and Switch I Contributes to the Allosteric Network between Receptor and Nucleotide in G alpha i1.
J.Biol.Chem., 289, 2014
4J43
DownloadVisualize
BU of 4j43 by Molmil
PylD holoenzyme
Descriptor: MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PylD, ...
Authors:Quitterer, F, Beck, P, Bacher, A, Groll, M.
Deposit date:2013-02-06
Release date:2013-06-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Reaction Mechanism of Pyrrolysine Synthase (PylD).
Angew.Chem.Int.Ed.Engl., 52, 2013
6G81
DownloadVisualize
BU of 6g81 by Molmil
Solution structure of the Ni metallochaperone HypA from Helicobacter pylori
Descriptor: Hydrogenase maturation factor HypA, ZINC ION
Authors:Spronk, C.A.E.M, Zerko, S, Gorka, M, Kozminski, W, Bardiaux, B, Zambelli, B, Musiani, F, Piccioli, M, Hu, H, Maroney, M, Ciurli, S.
Deposit date:2018-04-07
Release date:2018-10-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools.
J. Biol. Inorg. Chem., 23, 2018
1A8Y
DownloadVisualize
BU of 1a8y by Molmil
CRYSTAL STRUCTURE OF CALSEQUESTRIN FROM RABBIT SKELETAL MUSCLE SARCOPLASMIC RETICULUM AT 2.4 A RESOLUTION
Descriptor: CALSEQUESTRIN
Authors:Wang, S, Trumble, W.R, Liao, H, Wesson, C.R, Dunker, A.K, Kang, C.
Deposit date:1998-03-31
Release date:1999-03-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum.
Nat.Struct.Biol., 5, 1998
5HKY
DownloadVisualize
BU of 5hky by Molmil
Crystal structure of c-Cbl TKBD domain in complex with SPRY2 peptide (36-60, pY55) Refined to 1.8A Resolution (P6 form)
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase CBL, PENTAETHYLENE GLYCOL, ...
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Zhang, N, Cooper, A, Gao, P, Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of c-Cbl TKBD domain in complex with SPRY2 peptide (36-60, pY55) Refined to 1.8A Resolution (P6 form)
To be published
5YW1
DownloadVisualize
BU of 5yw1 by Molmil
Crystal structure of full length NS3 protein (eD4NS2BNS3) in complex with Bovine Pancreatic Trypsin Inhibitor
Descriptor: FLAVIVIRUS_NS2B, PTI protein, Peptidase S7
Authors:Phoo, W.W, El Sahili, A.
Deposit date:2017-11-28
Release date:2019-01-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of unlinked full length NS3 from Dengue virus provide insights into dynamics of protease domain
To Be Published
3R5O
DownloadVisualize
BU of 3r5o by Molmil
Crystal structure of the complex of bovine lactoperoxidase with 4-allyl-2-methoxyphenol at 2.6 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pandey, N, Singh, A.K, Singh, R.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-03-19
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of bovine lactoperoxidase with 4-allyl-2-methoxyphenol at 2.6 A resolution
To be Published
7N2Y
DownloadVisualize
BU of 7n2y by Molmil
Crystal Structure of a de Novo Three-stranded Coiled Coil Peptide Containing a dual Tris-thiolate Binding Site for Heavy Metal Complexes
Descriptor: Apo-(GRAND CoilSerL16CL23C)3, ZINC ION
Authors:Ruckthong, L, Stuckey, J.A, Pecoraro, V.L.
Deposit date:2021-05-30
Release date:2022-06-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Open Reading Frame 1 Protein of the Human Long Interspersed Nuclear Element 1 Retrotransposon Binds Multiple Equivalents of Lead.
J.Am.Chem.Soc., 143, 2021
3AEN
DownloadVisualize
BU of 3aen by Molmil
Reaction intermediate structure of Entamoeba histolytica methionine gamma-lyase 1 containing Michaelis complex and alpha-amino-alpha, beta-butenoic acid-pyridoxal-5'-phosphate
Descriptor: (2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid, GLYCEROL, METHIONINE, ...
Authors:Karaki, T, Sato, D, Shimizu, A, Nozaki, T, Harada, S.
Deposit date:2010-02-10
Release date:2011-02-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
To be Published
1A5T
DownloadVisualize
BU of 1a5t by Molmil
CRYSTAL STRUCTURE OF THE DELTA PRIME SUBUNIT OF THE CLAMP-LOADER COMPLEX OF ESCHERICHIA COLI DNA POLYMERASE III
Descriptor: DELTA PRIME, ZINC ION
Authors:Guenther, B, Onrust, R, Sali, A, O'Donnell, M, Kuriyan, J.
Deposit date:1998-02-18
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III.
Cell(Cambridge,Mass.), 91, 1997

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon