Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89832 件

7AB6
DownloadVisualize
BU of 7ab6 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) I52T variant
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, Multi-sensor hybrid histidine kinase, ...
著者Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
登録日2020-09-06
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
8ACP
DownloadVisualize
BU of 8acp by Molmil
RNA polymerase at U-rich pause bound to regulatory RNA putL - inactive, open clamp state
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Dey, S, Weixlbaumer, A.
登録日2022-07-06
公開日2022-10-19
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
7QTG
DownloadVisualize
BU of 7qtg by Molmil
Crystal Structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase PlaO1
分子名称: FE (II) ION, PlaO1, SULFATE ION
著者Lukat, P, Daum, M, Bechthold, A, Einsle, O.
登録日2022-01-14
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献Structural investigations on the Fe(II)/alpha-ketoglutarate dependent dioxygense PlaO1 from Streptomyces sp. Tu6071
Thesis, 2011
4QF3
DownloadVisualize
BU of 4qf3 by Molmil
Crystal structure of human BAZ2B PHD zinc finger in the free form
分子名称: Bromodomain adjacent to zinc finger domain protein 2B, ZINC ION
著者Tallant, C, Van Molle, I, Chirgadze, D.Y, Ciulli, A.
登録日2014-05-19
公開日2014-07-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis of histone tail recognition by human TIP5 PHD finger and bromodomain of the chromatin remodeling complex NoRC.
Structure, 23, 2015
5LYK
DownloadVisualize
BU of 5lyk by Molmil
CRYSTAL STRUCTURE OF INTRACELLULAR B30.2 DOMAIN OF BTN3A1 BOUND TO CITRATE
分子名称: 1,2-ETHANEDIOL, Butyrophilin subfamily 3 member A1, CITRATE ANION
著者Mohammed, F, Baker, A.T, Salim, M, Willcox, B.E.
登録日2016-09-28
公開日2017-09-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献BTN3A1 Discriminates gamma delta T Cell Phosphoantigens from Nonantigenic Small Molecules via a Conformational Sensor in Its B30.2 Domain.
ACS Chem. Biol., 12, 2017
5XXG
DownloadVisualize
BU of 5xxg by Molmil
Crystal structure of SmyD3 in complex with covalent inhibitor 2
分子名称: S-ADENOSYLMETHIONINE, SMYD3, ZINC ION, ...
著者Baburajendran, N, Jansson, E.A.
登録日2017-07-03
公開日2018-08-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Crystal structure of SmyD3 in complex with covalent inhibitor 2
To Be Published
8CYR
DownloadVisualize
BU of 8cyr by Molmil
Alpha-synuclein fibril from spontaneous control
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Distinct cryo-EM structures and functions of alpha-synuclein fibrils amplified from cerebrospinal fluid
To Be Published
8TA4
DownloadVisualize
BU of 8ta4 by Molmil
Cryo-EM structure of the human CLC-2 chloride channel transmembrane domain with symmetric C-terminal
分子名称: CHLORIDE ION, Chloride channel protein 2
著者Xu, M, Neelands, T, Powers, A.S, Liu, Y, Miller, S, Pintilie, G, Du Bois, J, Dror, R.O, Chiu, W, Maduke, M.
登録日2023-06-26
公開日2024-01-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism.
Elife, 12, 2024
4XUT
DownloadVisualize
BU of 4xut by Molmil
Structure of the CBM22-2 xylan-binding domain in complex with 1,3:1,4 Beta-glucotetraose B from Paenibacillus barcinonensis Xyn10C
分子名称: CALCIUM ION, Endo-1,4-beta-xylanase C, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Sainz-Polo, M.A, Sanz-Aparicio, J.
登録日2015-01-26
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Exploring Multimodularity in Plant Cell Wall Deconstruction: STRUCTURAL AND FUNCTIONAL ANALYSIS OF Xyn10C CONTAINING THE CBM22-1-CBM22-2 TANDEM.
J.Biol.Chem., 290, 2015
8F9R
DownloadVisualize
BU of 8f9r by Molmil
Rabbit sialic acid esterase (SIAE)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sialic acid acetylesterase, ...
著者Ide, D, Gorelik, A, Illes, K, Nagar, B.
登録日2022-11-24
公開日2024-05-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Structural Analysis of Mammalian Sialic Acid Esterase.
J.Mol.Biol., 436, 2024
6OCO
DownloadVisualize
BU of 6oco by Molmil
HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 6
分子名称: 4-[(1S,4S)-5-(3-chlorophenyl)-2,5-diazabicyclo[2.2.1]heptan-2-yl]-2-(pyridin-3-yl)pyrimidine-5-carbonitrile, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
著者Lesburg, C.A, Augustin, M.A.
登録日2019-03-25
公開日2019-12-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Discovery and optimization of heteroaryl piperazines as potent and selective PI3K delta inhibitors.
Bioorg.Med.Chem.Lett., 30, 2020
6OKD
DownloadVisualize
BU of 6okd by Molmil
Crystal Structure of human transferrin receptor in complex with a cystine-dense peptide
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Finton, K.A.K, Rupert, P.B, Strong, R.K.
登録日2019-04-12
公開日2020-04-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A TfR-Binding Cystine-Dense Peptide Promotes Blood-Brain Barrier Penetration of Bioactive Molecules.
J.Mol.Biol., 432, 2020
8F9Q
DownloadVisualize
BU of 8f9q by Molmil
Guinea pig sialic acid esterase (SIAE)
分子名称: Sialic acid acetylesterase, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ide, D, Gorelik, A, Illes, K, Nagar, B.
登録日2022-11-24
公開日2024-05-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structural Analysis of Mammalian Sialic Acid Esterase.
J.Mol.Biol., 436, 2024
8AD7
DownloadVisualize
BU of 8ad7 by Molmil
Flavin-dependent tryptophan 6-halogenase Thal in complex with D-Trp
分子名称: D-TRYPTOPHAN, GLYCEROL, PHOSPHATE ION, ...
著者Moritzer, A.C, Niemann, H.H.
登録日2022-07-08
公開日2022-10-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Enzymatic Late-Stage Halogenation of Peptides.
Chembiochem, 24, 2023
6ON2
DownloadVisualize
BU of 6on2 by Molmil
Lon Protease from Yersinia pestis with Y2853 substrate
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent protease La, ...
著者Shin, M, Asmita, A, Puchades, C, Adjei, E, Wiseman, R.L, Karzai, A.W, Lander, G.C.
登録日2019-04-19
公開日2019-05-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for distinct operational modes and protease activation in AAA+ protease Lon.
Sci Adv, 6, 2020
6S5S
DownloadVisualize
BU of 6s5s by Molmil
Cfucosylated second generation peptide dendrimer SBD8 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.43 Angstrom resolution
分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, AMINO GROUP, CALCIUM ION, ...
著者Baeriswyl, S, Stocker, A, Reymond, J.-L.
登録日2019-07-02
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.433 Å)
主引用文献X-Ray Crystal Structure of a Second Generation Peptide Dendrimer in Complex with Pseudomonas aeruginosa Lectin LecB
Helv.Chim.Acta, 2019
7DG2
DownloadVisualize
BU of 7dg2 by Molmil
Nse1-Nse3-Nse4 complex
分子名称: ACETATE ION, GLYCEROL, MAGE domain-containing protein, ...
著者Cho, Y, Jo, A.
登録日2020-11-10
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure Basis for Shaping the Nse4 Protein by the Nse1 and Nse3 Dimer within the Smc5/6 Complex.
J.Mol.Biol., 433, 2021
8TU9
DownloadVisualize
BU of 8tu9 by Molmil
Cryo-EM structure of HGSNAT-acetyl-CoA complex at pH 7.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL COENZYME *A, Enhanced green fluorescent protein,Heparan-alpha-glucosaminide N-acetyltransferase,Isoform 2 of Heparan-alpha-glucosaminide N-acetyltransferase
著者Navratna, V, Kumar, A, Mosalaganti, S.
登録日2023-08-15
公開日2024-02-07
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structure of the human heparan-alpha-glucosaminide N -acetyltransferase (HGSNAT).
Elife, 13, 2024
1Z4A
DownloadVisualize
BU of 1z4a by Molmil
Ferritin from T. maritima
分子名称: EICOSANE, ferritin
著者Steinbacher, S, Schiffmann, S, Bacher, A, Fischer, M.
登録日2005-03-15
公開日2006-10-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of T. maritima ferritin
To be Published
3F0X
DownloadVisualize
BU of 3f0x by Molmil
Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine
分子名称: 5-[(3R)-3-(5-methoxy-3',5'-dimethylbiphenyl-3-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Trimethoprim-sensitive dihydrofolate reductase
著者Anderson, A.C, Frey, K.M, Liu, J, Lombardo, M.N.
登録日2008-10-27
公開日2009-10-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystallographic Complexes of Wildtype and Mutant MRSA DHFR Reveal Interactions for Lead Design
To be Published
8CWW
DownloadVisualize
BU of 8cww by Molmil
Structure of S. cerevisiae Hop1 CBR bound to a nucleosome
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Gu, Y, Ur, S.N, Milano, C.R, Tromer, E.C, Vale-Silva, L.A, Hochwagen, A, Corbett, K.D.
登録日2022-05-19
公開日2023-06-07
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Chromatin binding by HORMAD proteins regulates meiotic recombination initiation.
Embo J., 43, 2024
5IPS
DownloadVisualize
BU of 5ips by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 4
分子名称: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
著者Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
登録日2016-03-09
公開日2016-04-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
6UEB
DownloadVisualize
BU of 6ueb by Molmil
Structure of Rabies SAD-B19 L-P complex from cryo-EM
分子名称: Large structural protein, Phosphoprotein,Phosphoprotein, ZINC ION
著者Horwitz, J.A, Harrison, S.C.
登録日2019-09-20
公開日2020-02-05
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of a rabies virus polymerase complex from electron cryo-microscopy.
Proc.Natl.Acad.Sci.USA, 117, 2020
8AW6
DownloadVisualize
BU of 8aw6 by Molmil
Expanded Coxsackievirus A9 after 0.01% faf-BSA treatment
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
著者Domanska, A, Plavec, Z, Ruokolainen, V, Loflund, B, Marjomaki, V.S, Butcher, S.J.
登録日2022-08-29
公開日2022-10-26
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural Studies Reveal that Endosomal Cations Promote Formation of Infectious Coxsackievirus A9 A-Particles, Facilitating RNA and VP4 Release.
J.Virol., 96, 2022
6EKA
DownloadVisualize
BU of 6eka by Molmil
Solid-state MAS NMR structure of the HELLF prion amyloid fibrils
分子名称: Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2
著者Martinez, D, Daskalov, A, Andreas, L, Bardiaux, B, Coustou, V, Stanek, J, Berbon, M, Noubhani, M, Kauffmann, B, Wall, J.S, Pintacuda, G, Saupe, S.J, Habenstein, B, Loquet, A.
登録日2017-09-25
公開日2018-10-10
最終更新日2024-06-19
実験手法SOLID-STATE NMR
主引用文献Structural and molecular basis of cross-seeding barriers in amyloids
Proc.Natl.Acad.Sci.USA, 118, 2021

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon