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PDB: 88608 件

1SS1
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STAPHYLOCOCCAL PROTEIN A, B-DOMAIN, Y15W MUTANT, NMR, 25 STRUCTURES
分子名称: Immunoglobulin G binding protein A
著者Sato, S, Religa, T.L, Daggett, V, Fersht, A.R.
登録日2004-03-23
公開日2004-04-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献From The Cover: Testing protein-folding simulations by experiment: B domain of protein A.
Proc.Natl.Acad.Sci.USA, 101, 2004
7ZVW
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NuA4 Histone Acetyltransferase Complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, Chromatin modification-related protein EAF1, ...
著者Schultz, P, Ben-Shem, A, Frechard, A.
登録日2022-05-17
公開日2023-05-31
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The structure of the NuA4-Tip60 complex reveals the mechanism and importance of long-range chromatin modification.
Nat.Struct.Mol.Biol., 30, 2023
2ITL
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The origin binding domain of the SV40 large T antigen bound to the functional pen palindrome DNA (23 bp)
分子名称: 24-nt PEN element of the SV40 DNA origin, large T antigen
著者Bochkareva, E, Seitova, A, Bochkarev, A.
登録日2006-10-19
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA
Embo J., 25, 2006
3E6S
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Crystal structure of ferritin soaked with iron from Pseudo-nitzschia multiseries
分子名称: FE (III) ION, Ferritin, SULFATE ION
著者Murphy, M.E.P, Arrieta, A.L.
登録日2008-08-15
公開日2008-11-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Ferritin is used for iron storage in bloom-forming marine pennate diatoms.
Nature, 457, 2009
7ALE
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Crystal structure of human PAICS in complex with inhibitor 69
分子名称: (2~{S})-2-[[5-azanyl-1-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]imidazol-4-yl]car bonylamino]butanedioic acid, 2-azanyl-~{N}-[2-bromanyl-5-[4-[3-(dimethylamino)propylsulfonyl]piperazin-1-yl]phenyl]-1,3-oxazole-4-carboxamide, Multifunctional protein ADE2
著者Skerlova, J, Marttila, P, Unterlass, J, Jemth, A.-S, Henriksson, M, Wakchaure, P, Grube, M, Warpman Berglund, U, Homan, E, Helleday, T, Stenmark, P.
登録日2020-10-06
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Cellular and biochemical validation of a potent PAICS inhibitor
To Be Published
7AN9
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Enzyme of biosynthetic pathway
分子名称: 3-[(1-Carboxyvinyl)oxy]benzoic acid, Chorismate dehydratase
著者Archna, A, Breithaupt, C, Stubbs, M.T.
登録日2020-10-11
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Mechanism of the chorismate dehydratase MqnA, first enzyme of the futalosine pathway
Chemrxiv, 2022
5DFL
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Crystal structure of Ube2K~Ubiquitin conjugate
分子名称: GLYCEROL, Ubiquitin, Ubiquitin-conjugating enzyme E2 K
著者Middleton, A.J, Day, C.L.
登録日2015-08-27
公開日2015-12-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The molecular basis of lysine 48 ubiquitin chain synthesis by Ube2K.
Sci Rep, 5, 2015
1SYG
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ENGINEERING ALTERNATIVE BETA-TURN TYPES IN STAPHYLOCOCCAL NUCLEASE
分子名称: STAPHYLOCOCCAL NUCLEASE
著者Hynes, T.R, Hodel, A, Fox, R.O.
登録日1994-01-07
公開日1994-07-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engineering alternative beta-turn types in staphylococcal nuclease.
Biochemistry, 33, 1994
7ZWA
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CryoEM structure of Ku heterodimer bound to DNA and PAXX
分子名称: DNA (5'-D(P*CP*GP*AP*TP*AP*TP*CP*TP*AP*GP*AP*GP*GP*GP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*CP*CP*CP*TP*CP*TP*AP*GP*AP*TP*AP*T)-3'), PHOSPHATE ION, ...
著者Hardwick, S.W, Kefala-Stavridi, A, Chirgadze, D.Y, Blundell, T.L, Chaplin, A.K.
登録日2022-05-19
公開日2023-05-31
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献PAXX binding to the NHEJ machinery explains functional redundancy with XLF.
Sci Adv, 9, 2023
1SXY
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1.07 A Crystal Structure of D30N Mutant of Nitrophorin 4 from Rhodnius Prolixus
分子名称: AMMONIUM ION, Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE
著者Maes, E.M, Weichsel, A, Andersen, J.F, Shepley, D, Montfort, W.R.
登録日2004-03-31
公開日2004-06-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Role of binding site loops in controlling nitric oxide release: structure and kinetics of mutant forms of nitrophorin 4
Biochemistry, 43, 2004
7AYC
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Crystal Structure of human mitochondrial 2-Enoyl Thioester Reductase (MECR) with single mutation G165Q
分子名称: CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase, mitochondrial
著者Rahman, M.T, Koski, M.K, Autio, K.J, Kastaniotis, A.J, Wierenga, R.K, Hiltunen, J.K.
登録日2020-11-12
公開日2022-06-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献An engineered variant of MECR reductase reveals indispensability of long-chain acyl-ACPs for mitochondrial respiration.
Nat Commun, 14, 2023
1SY9
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Structure of calmodulin complexed with a fragment of the olfactory CNG channel
分子名称: CALCIUM ION, CALMODULIN, Cyclic-nucleotide-gated olfactory channel
著者Contessa, G.M, Orsale, M, Melino, S, Torre, V, Paci, M, Desideri, A, Cicero, D.O.
登録日2004-04-01
公開日2005-04-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of calmodulin complexed with an olfactory CNG channel fragment and role of the central linker: residual dipolar couplings to evaluate calmodulin binding modes outside the kinase family.
J.Biomol.Nmr, 31, 2005
6VQP
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Structure of CalU17 from the Calicheamicin Biosynthesis Pathway of Micromonospora echinospora
分子名称: CalU17, CalU17 His-Tagged protein, GLYCEROL, ...
著者Kosgei, A.J, Miller, M.D, Xu, W, Van Lanen, S.G, Thorson, J.S, Phillips Jr, G.N.
登録日2020-02-05
公開日2021-02-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of DynF from the Dynemicin Biosynthesis Pathway of Micromonospora chersina
To Be Published
7B0C
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[4Fe-4S]-NsrR complexed to 23-bp HmpA1 operator fragment
分子名称: DNA (5'-D(P*AP*AP*CP*AP*CP*GP*AP*AP*TP*AP*TP*CP*AP*TP*CP*TP*AP*CP*CP*AP*AP*TP*T)-3'), DNA (5'-D(P*AP*AP*TP*TP*GP*GP*TP*AP*GP*AP*TP*GP*AP*TP*AP*TP*TP*CP*GP*TP*GP*TP*T)-3'), HTH-type transcriptional repressor NsrR, ...
著者Rohac, R, Fontecilla-Camps, J.C, Volbeda, A.
登録日2020-11-19
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural determinants of DNA recognition by the NO sensor NsrR and related Rrf2-type [FeS]-transcription factors.
Commun Biol, 5, 2022
6VX2
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HIV Integrase core domain in complex with inhibitor (5-methyl-1-benzofuran-3-yl)acetic acid
分子名称: (5-methyl-1-benzofuran-3-yl)acetic acid, IODIDE ION, Integrase, ...
著者Gorman, M.A, Parker, M.W.
登録日2020-02-21
公開日2021-02-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献HIV Integrase core domain in complex with inhibitor (5-methyl-1-benzofuran-3-yl)acetic acid
To Be Published
2IHO
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BU of 2iho by Molmil
Crystal structure of MOA, a lectin from the mushroom Marasmius oreades in complex with the trisaccharide Gal(1,3)Gal(1,4)GlcNAc
分子名称: Lectin, beta-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Grahn, E, Askarieh, G, Holmner, A, Tateno, H, Winter, H.C, Goldstein, I.J, Krengel, U.
登録日2006-09-27
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal structure of the marasmius oreades mushroom lectin in complex with a xenotransplantation epitope.
J.Mol.Biol., 369, 2007
6VXG
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Structure of the C-terminal Domain of RAGE and Its Inhibitor
分子名称: Advanced glycosylation end product-specific receptor, N-(4-{7-cyano-4-[(morpholin-4-yl)methyl]quinolin-2-yl}phenyl)acetamide
著者Ramirez, L, Shekhtman, A.
登録日2020-02-21
公開日2021-02-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Small-molecule antagonism of the interaction of the RAGE cytoplasmic domain with DIAPH1 reduces diabetic complications in mice.
Sci Transl Med, 13, 2021
4RGU
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Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with ferulic acid
分子名称: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CHLORIDE ION, GLYCEROL, ...
著者Kim, Y, Joachimiak, G, Bigelow, L, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-09-30
公開日2015-03-04
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.891 Å)
主引用文献Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with ferulic acid
To be Published, 2014
7ZW4
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Crystal structure of Talin R7R8 domains with Caskin-2 LD-peptide
分子名称: Caskin-2, Talin-1
著者Celie, P.H.N, Joosten, R.P, Sonnenberg, A, Perrakis, A.
登録日2022-05-18
公開日2023-05-31
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Caskin2 is a novel talin- and Abi1-binding protein that promotes cell motility.
J.Cell.Sci., 137, 2024
2IIV
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Human dipeptidyl peptidase 4 in complex with a diazepan-2-one inhibitor
分子名称: (3R)-4-[(3R)-3-AMINO-4-(2,4,5-TRIFLUOROPHENYL)BUTANOYL]-3-METHYL-1,4-DIAZEPAN-2-ONE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Scapin, G, Weber, A.E, Biftu, T.
登録日2006-09-28
公開日2006-11-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献(3R)-4-[(3R)-3-Amino-4-(2,4,5-trifluorophenyl)butanoyl]-3-(2,2,2-trifluoroethyl)-1,4-diazepan-2-one, a selective dipeptidyl peptidase IV inhibitor for the treatment of type 2 diabetes
Bioorg.Med.Chem.Lett., 17, 2007
1T1O
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Components of the control 70S ribosome to provide reference for the RRF binding site
分子名称: 19-mer fragment of the 23S rRNA, 42-mer fragment of double helix from 16S rRNA, dodecamer fragment of double helix from 23S rRNA
著者Agrawal, R.K, Sharma, M.R, Kiel, M.C, Hirokawa, G, Booth, T.M, Spahn, C.M, Grassucci, R.A, Kaji, A, Frank, J.
登録日2004-04-16
公開日2004-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
6PXJ
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Crystal structure of human thrombin mutant I16T
分子名称: GLYCEROL, MAGNESIUM ION, Thrombin heavy chain, ...
著者Stojanovski, B, Chen, Z, Koester, S.K, Pelc, L.A, Di Cera, E.
登録日2019-07-26
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Role of the I16-D194 ionic interaction in the trypsin fold.
Sci Rep, 9, 2019
6J2M
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Crystal structure of AtFKBP53 C-terminal domain
分子名称: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN, CHLORIDE ION, Peptidyl-prolyl cis-trans isomerase FKBP53
著者Singh, A.K, Vasudevan, D.
登録日2019-01-01
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献AtFKBP53: a chimeric histone chaperone with functional nucleoplasmin and PPIase domains.
Nucleic Acids Res., 48, 2020
4RGQ
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Crystal structure of the Methanocaldococcus jannaschii G1PDH with NADPH and DHAP
分子名称: 1,2-ETHANEDIOL, 1,3-DIHYDROXYACETONEPHOSPHATE, Glycerol-1-phosphate dehydrogenase, ...
著者Carbone, V, Ronimus, R.S, Schofield, L.R, Sutherland-Smith, A.J.
登録日2014-09-30
公開日2015-07-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structure and Evolution of the Archaeal Lipid Synthesis Enzyme sn-Glycerol-1-phosphate Dehydrogenase.
J.Biol.Chem., 290, 2015
1JOV
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Crystal Structure Analysis of HI1317
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HI1317, SULFATE ION
著者Bonander, N, Tordova, M, Howard, A.J, Eisenstein, E, Gilliland, G, Structure 2 Function Project (S2F)
登録日2001-07-31
公開日2003-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal 1.57-A Crystal Structure of HI1317
TO BE PUBLISHED

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