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PDB: 89035 件

3TX4
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Crystal Structure of Mutant (C354A) M. tuberculosis LD-transpeptidase type 2
分子名称: Mycobacterium Tuberculosis LD-transpeptidase type 2
著者Erdemli, S, Bianchet, M.A, Gupta, R, Lamichhane, G, Amzel, L.M.
登録日2011-09-22
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Targeting the Cell Wall of Mycobacterium tuberculosis: Structure and Mechanism of L,D-Transpeptidase 2.
Structure, 20, 2012
6DFT
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BU of 6dft by Molmil
Trypanosoma brucei deoxyhypusine synthase
分子名称: Deoxyhypusine synthase, Deoxyhypusine synthase regulatory subunit, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Tomchick, D.R, Phillips, M.A, Afanador, G.A.
登録日2018-05-15
公開日2018-08-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Trypanosomatid Deoxyhypusine Synthase Activity Is Dependent on Shared Active-Site Complementation between Pseudoenzyme Paralogs.
Structure, 26, 2018
4ONF
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Fab fragment of 3D6 in complex with amyloid beta 1-7
分子名称: 3D6 FAB ANTIBODY HEAVY CHAIN, 3D6 FAB ANTIBODY LIGHT CHAIN, Amyloid beta A4 protein
著者Feinberg, H, Saldanha, J.W, Diep, L, Goel, A, Widom, A, Veldman, G.M, Weis, W.I, Schenk, D, Basi, G.S.
登録日2014-01-28
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure reveals conservation of amyloid-beta conformation recognized by 3D6 following humanization to bapineuzumab.
Alzheimers Res Ther, 6, 2014
8GLU
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BU of 8glu by Molmil
CryoEM structure of TnsC(1-503) bound to TnsD(1-318) from E.coli Tn7
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Shen, Y, Guarne, A.
登録日2023-03-23
公開日2024-07-31
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Assembly of the Tn7 targeting complex by a regulated stepwise process.
Mol.Cell, 84, 2024
4OTI
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Crystal Structure of PRK1 Catalytic Domain in Complex with Tofacitinib
分子名称: 3-{(3R,4R)-4-methyl-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}-3-oxopropanenitrile, Serine/threonine-protein kinase N1
著者Chamberlain, P.P, Delker, S, Pagarigan, B, Mahmoudi, A, Jackson, P, Abbassian, M, Muir, J, Raheja, N, Cathers, B.
登録日2014-02-13
公開日2014-08-27
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal Structures of PRK1 in Complex with the Clinical Compounds Lestaurtinib and Tofacitinib Reveal Ligand Induced Conformational Changes.
Plos One, 9, 2014
4F1W
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BU of 4f1w by Molmil
Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Salmonella enterica with Adenine
分子名称: 1,2-ETHANEDIOL, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, ADENINE, ...
著者Haapalainen, A.M, Thomas, K, Bonanno, J.B, Almo, S.C, Schramm, V.L.
登録日2012-05-07
公開日2013-05-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Salmonella enterica with Adenine
Structure, 21, 2013
2Y2W
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Elucidation of the substrate specificity and protein structure of AbfB, a family 51 alpha-L-arabinofuranosidase from Bifidobacterium longum.
分子名称: ARABINOFURANOSIDASE
著者Lagaert, S, Schoepe, J, Delcour, J.A, Lavigne, R, Strelkov, S.V, Courtin, C.M, Mikkelsen, N.E, Sandgren, M, Volckaert, G.
登録日2010-12-16
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Elucidation of the Substrate Specificity and Protein Structure of Abfb, a Family 51 Alpha-L- Arabinofuranosidase from Bifidobacterium Longum.
To be Published
1I1N
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BU of 1i1n by Molmil
HUMAN PROTEIN L-ISOASPARTATE O-METHYLTRANSFERASE WITH S-ADENOSYL HOMOCYSTEINE
分子名称: PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE, S-ADENOSYL-L-HOMOCYSTEINE
著者Smith, C.D, Chattopadhyay, D, Carson, M, Friedman, A.M, Skinner, M.M.
登録日2001-02-02
公開日2002-03-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of human L-isoaspartyl-O-methyl-transferase with S-adenosyl homocysteine at 1.6-A resolution and modeling of an isoaspartyl-containing peptide at the active site.
Protein Sci., 11, 2002
1W6Q
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BU of 1w6q by Molmil
X-RAY CRYSTAL STRUCTURE OF R111H HUMAN GALECTIN-1
分子名称: BETA-MERCAPTOETHANOL, GALECTIN-1
著者Lopez-Lucendo, M.I.F, Gabius, H.J, Romero, A.
登録日2004-08-21
公開日2004-10-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding
J.Mol.Biol., 343, 2004
8SV8
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BU of 8sv8 by Molmil
Cryo-EM structure of a double loaded human UBA7-UBE2L6-ISG15 thioester mimetic complex from a composite map
分子名称: ADENOSINE MONOPHOSPHATE, Ubiquitin-like modifier-activating enzyme 7, Ubiquitin-like protein ISG15, ...
著者Afsar, M, Jia, L, Ruben, E.A, Olsen, S.K.
登録日2023-05-15
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Cryo-EM structures of Uba7 reveal the molecular basis for ISG15 activation and E1-E2 thioester transfer.
Nat Commun, 14, 2023
6DND
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BU of 6dnd by Molmil
Crystal structure of wild-type (WT) human Glutamate oxaloacetate transaminase 1 (GOT1)
分子名称: Aspartate aminotransferase, cytoplasmic, PYRIDOXAL-5'-PHOSPHATE, ...
著者Assar, Z, Holt, M.C, Stein, A.J, Lairson, L, Lyssiotis, C.A.
登録日2018-06-06
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biochemical Characterization and Structure-Based Mutational Analysis Provide Insight into the Binding and Mechanism of Action of Novel Aspartate Aminotransferase Inhibitors.
Biochemistry, 57, 2018
2XHW
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BU of 2xhw by Molmil
HCV-J4 NS5B Polymerase Trigonal Crystal Form
分子名称: RNA-directed RNA polymerase
著者Harrus, D, Ahmed-El-Sayed, N, Simister, P.C, Miller, S, Triconnet, M, Hagedorn, C.H, Mahias, K, Rey, F.A, Astier-Gin, T, Bressanelli, S.
登録日2010-06-21
公開日2010-08-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Further Insights Into the Roles of GTP and the C- Terminus of the Hepatitis C Virus Polymerase in the Initiation of RNA Synthesis
J.Biol.Chem., 285, 2010
3KYW
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BU of 3kyw by Molmil
Xray crystal structure determination of H-labeled perdeuterated rubredoxin at 295K
分子名称: FE (III) ION, Rubredoxin
著者Gardberg, A.S.
登録日2009-12-07
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography.
Acta Crystallogr.,Sect.D, 66, 2010
5DMU
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BU of 5dmu by Molmil
Structure of the NHEJ polymerase from Methanocella paludicola
分子名称: 1,2-ETHANEDIOL, GLYCEROL, NHEJ Polymerase, ...
著者Brissett, N.C, Bartlett, E.J, Doherty, A.J.
登録日2015-09-09
公開日2015-10-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Molecular basis for DNA strand displacement by NHEJ repair polymerases.
Nucleic Acids Res., 44, 2016
3UD2
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BU of 3ud2 by Molmil
Crystal structure of Selenomethionine ZU5A-ZU5B protein domains of human erythrocyte ankyrin
分子名称: Ankyrin-1, CHLORIDE ION, ETHANOL, ...
著者Yasunaga, M, Ipsaro, J.J, Mondragon, A.
登録日2011-10-27
公開日2012-02-22
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structurally Similar but Functionally Diverse ZU5 Domains in Human Erythrocyte Ankyrin.
J.Mol.Biol., 417, 2012
2G6F
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BU of 2g6f by Molmil
Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2
分子名称: COBALT HEXAMMINE(III), Rho guanine nucleotide exchange factor 7
著者Hoelz, A.
登録日2006-02-24
公開日2006-04-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2
J.Mol.Biol., 358, 2006
8H2I
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BU of 8h2i by Molmil
Near-atomic structure of five-fold averaged PBCV-1 capsid
分子名称: MCPv1, MCPv2, MCPv3, ...
著者Shao, Q, Agarkova, I.V, Noel, E.A, Dunigan, D.D, Liu, Y, Wang, A, Guo, M, Xie, L, Zhao, X, Rossmann, M.G, Van Etten, J.L, Klose, T, Fang, Q.
登録日2022-10-06
公開日2022-11-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.
Nat Commun, 13, 2022
6RAU
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BU of 6rau by Molmil
PostS3_Pmar_lig4_WT
分子名称: ADENOSINE MONOPHOSPHATE, ATP-dependent DNA ligase, DNA (5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*CP*CP*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3'), ...
著者Leiros, H.K.S, Williamson, A.
登録日2019-04-08
公開日2019-07-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.
Nucleic Acids Res., 47, 2019
4W7J
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BU of 4w7j by Molmil
CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE
分子名称: Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Medrano, F.J, Romero, A.
登録日2014-08-22
公開日2015-03-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study.
Biochem.J., 466, 2015
5VY4
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BU of 5vy4 by Molmil
Thermoplasma acidophilum 20S Proteasome using 200keV with image shift
分子名称: Proteasome subunit alpha, Proteasome subunit beta
著者Herzik Jr, M.A, Wu, M, Lander, G.C.
登録日2017-05-24
公開日2017-06-14
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Achieving better-than-3- angstrom resolution by single-particle cryo-EM at 200 keV.
Nat. Methods, 14, 2017
4F07
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BU of 4f07 by Molmil
Structure of the Styrene Monooxygenase Flavin Reductase (SMOB) from Pseudomonas putida S12
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NITRATE ION, SULFATE ION, ...
著者Sazinsky, M.H, Morrison, E, Kantz, A, Gassner, G.
登録日2012-05-03
公開日2013-05-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Mechanism of Styrene Monooxygenase Reductase: New Insight into the FAD-Transfer Reaction.
Biochemistry, 52, 2013
5DWP
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BU of 5dwp by Molmil
Crystal Structure of human transthyretin (TTR) processed with the CrystalDirect automated mounting and cryo-cooling technology
分子名称: Transthyretin
著者Zander, U, Cornaciu, I, Forsyth, T, Yee, A, Marquez, J.A.
登録日2015-09-22
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Automated harvesting and processing of protein crystals through laser photoablation.
Acta Crystallogr D Struct Biol, 72, 2016
4OVD
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BU of 4ovd by Molmil
Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469
分子名称: CALCIUM ION, Peptidoglycan glycosyltransferase
著者Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Babnigg, G, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-02-21
公開日2014-03-12
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469
To be Published
2GAE
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BU of 2gae by Molmil
Crystal structure of MltA from E. coli
分子名称: Membrane-bound lytic murein transglycosylase A
著者Powell, A.J, Liu, Z.J, Nicholas, R.A, Davies, C.
登録日2006-03-08
公開日2006-05-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
J.Mol.Biol., 359, 2006
5KN4
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BU of 5kn4 by Molmil
Pavine N-methyltransferase apoenzyme pH 6.0
分子名称: Pavine N-methyltransferase
著者Torres, M.A, Hoffarth, E, Eugenio, L, Savtchouk, J, Chen, X, Morris, J, Facchini, P.J, Ng, K.K.S.
登録日2016-06-27
公開日2016-09-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural and Functional Studies of Pavine N-Methyltransferase from Thalictrum flavum Reveal Novel Insights into Substrate Recognition and Catalytic Mechanism.
J.Biol.Chem., 291, 2016

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件を2024-09-04に公開中

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