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PDB: 89472 件

4HVV
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Crystal structure of the T98E c-Src-SH3 domain mutant in complex with the high affinity peptide APP12
分子名称: Proto-oncogene tyrosine-protein kinase Src, SULFATE ION, SYNTHETIC PEPTIDE Acetyl-APPLPPRNRP
著者Camara-Artigas, A.
登録日2012-11-07
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic resolution structures of the c-Src SH3 domain in complex with two high-affinity peptides from classes I and II.
Acta Crystallogr.,Sect.D, 69, 2013
5L2I
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The X-ray co-crystal structure of human CDK6 and Palbociclib.
分子名称: 6-ACETYL-8-CYCLOPENTYL-5-METHYL-2-[(5-PIPERAZIN-1-YLPYRIDIN-2-YL)AMINO]PYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE, Cyclin-dependent kinase 6
著者Chen, P, Ferre, R.A, Deihl, W, Yu, X, He, Y.-A.
登録日2016-08-01
公開日2016-08-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Spectrum and Degree of CDK Drug Interactions Predicts Clinical Performance.
Mol.Cancer Ther., 15, 2016
6CXV
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Structure of the S167H mutant of human indoleamine 2,3 dioxygenase in complex with tryptophan and cyanide
分子名称: 2-(1H-indol-3-yl)ethanol, CYANIDE ION, Indoleamine 2,3-dioxygenase 1, ...
著者Lewis-Ballester, A, Yeh, S.-R, Karkashon, S, Batabyal, D, Poulos, T.L.
登録日2018-04-04
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Inhibition Mechanisms of Human Indoleamine 2,3 Dioxygenase 1.
J. Am. Chem. Soc., 140, 2018
4NYX
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Crystal Structure of the Bromodomain of human CREBBP in complex with a dihydroquinoxalinone ligand
分子名称: (3R)-N-[3-(7-methoxy-3,4-dihydroquinolin-1(2H)-yl)propyl]-3-methyl-2-oxo-1,2,3,4-tetrahydroquinoxaline-5-carboxamide, CREB-binding protein
著者Filippakopoulos, P, Picaud, S, Felletar, I, Rooney, T.P.C, Fedorov, O, Martin, S, Monteiro, O.P, Conway, S.J, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2013-12-11
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal Structure of the Bromodomain of human CREBBP in complex with a dihydroquinoxalinone ligand
TO BE PUBLISHED
4X9V
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PLK-1 polo-box domain in complex with Bioactive Imidazolium-containing phosphopeptide macrocycle 3C
分子名称: Phosphopeptide macrocycle 3C, Serine/threonine-protein kinase PLK1
著者Grant, R.A, Qian, W.-J, Yaffe, M.B, Burke, T.R.
登録日2014-12-11
公開日2015-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.429 Å)
主引用文献Neighbor-directed histidine N ( tau )-alkylation: A route to imidazolium-containing phosphopeptide macrocycles.
Biopolymers, 104, 2015
7KWS
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Cj1441 with NAD+ and UDP-glucose
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Riegert, A.S, Raushel, F.M.
登録日2020-12-02
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Functional and Structural Characterization of the UDP-Glucose Dehydrogenase Involved in Capsular Polysaccharide Biosynthesis from Campylobacter jejuni .
Biochemistry, 60, 2021
7KY5
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Structure of the S. cerevisiae phosphatidylcholine flippase Dnf2-Lem3 complex in the E2P transition state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alkylphosphocholine resistance protein LEM3, CHOLESTEROL, ...
著者Bai, L, You, Q, Jain, B.K, Duan, H.D, Kovach, A, Graham, T.R, Li, H.
登録日2020-12-07
公開日2021-01-06
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.98 Å)
主引用文献Transport mechanism of P4 ATPase phosphatidylcholine flippases.
Elife, 9, 2020
6D0I
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ParT: Prs ADP-ribosylating toxin bound to cognate antitoxin ParS. L48M ParT, SeMet-substituted complex.
分子名称: GLYCEROL, ParS: COG5642 (DUF2384) antitoxin fragment, ParT: COG5654 (RES domain) toxin
著者Piscotta, F.J, Jeffrey, P.D, Link, A.J.
登録日2018-04-10
公開日2019-01-09
最終更新日2019-01-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献ParST is a widespread toxin-antitoxin module that targets nucleotide metabolism.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7KYB
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Structure of the S. cerevisiae phosphatidylcholine flippase Dnf1-Lem3 complex in the E1-ADP state
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bai, L, You, Q, Jain, B.K, Duan, H.D, Kovach, A, Graham, T.R, Li, H.
登録日2020-12-07
公開日2021-01-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Transport mechanism of P4 ATPase phosphatidylcholine flippases.
Elife, 9, 2020
6TMH
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Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, OSCP/F1/c-ring model
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha,subunit alpha, ...
著者Muhleip, A, Kock Flygaard, R, Amunts, A.
登録日2019-12-04
公開日2020-12-16
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun, 12, 2021
6D17
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Crystal structure of KPC-2 complexed with compound 3
分子名称: Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, [(6-oxo-2H,6H-[1,3]dioxolo[4,5-g][1]benzopyran-8-yl)methyl]phosphonic acid
著者Pemberton, O.A, Chen, Y.
登録日2018-04-11
公開日2019-04-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6TNG
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Structure of FANCD2 in complex with FANCI
分子名称: Fanconi anemia complementation group I, Uncharacterized protein
著者Alcon, P, Shakeel, S, Passmore, L.A.
登録日2019-12-07
公開日2020-02-19
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献FANCD2-FANCI is a clamp stabilized on DNA by monoubiquitination of FANCD2 during DNA repair.
Nat.Struct.Mol.Biol., 27, 2020
4I22
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BU of 4i22 by Molmil
Structure of the monomeric (V948R)gefitinib/erlotinib resistant double mutant (L858R+T790M) EGFR kinase domain co-crystallized with gefitinib
分子名称: Epidermal growth factor receptor, Gefitinib, SULFATE ION
著者Gajiwala, K.S, Feng, J, Ferre, R, Ryan, K, Brodsky, O, Stewart, A.
登録日2012-11-21
公開日2013-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Insights into the Aberrant Activity of Mutant EGFR Kinase Domain and Drug Recognition.
Structure, 21, 2013
4RXM
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BU of 4rxm by Molmil
Crystal structure of periplasmic ABC transporter solute binding protein A7JW62 from Mannheimia haemolytica PHL213, Target EFI-511105, in complex with Myo-inositol
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, ASPARTIC ACID, CHLORIDE ION, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Morisco, L.L, Wasserman, S.R, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Hillerich, B, Siedel, R.D, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-12-11
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of solute binding sugar transporter A7JW62 from Mannheimia haemolytica, Target EFI-511105.
To be Published
5VC1
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Crystal structure of L-selectin lectin/EGF domains
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Wedepohl, S, Dernedde, J, Vahedi-Faridi, A, Tauber, R, Saenger, W, Bulut, H.
登録日2017-03-30
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Reducing Macro- and Microheterogeneity of N-Glycans Enables the Crystal Structure of the Lectin and EGF-Like Domains of Human L-Selectin To Be Solved at 1.9 angstrom Resolution.
Chembiochem, 18, 2017
2Q4U
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Ensemble refinement of the crystal structure of an EF-hand protein from Danio rerio Dr.36843
分子名称: Protein Zgc:100843
著者Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2007-05-31
公開日2007-06-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
5L4Z
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Crystal structure of enzyme in purine metabolism
分子名称: Cytosolic purine 5'-nucleotidase, GLYCEROL
著者Hnizda, A, Pachl, P, Rezacova, P.
登録日2016-05-27
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Oligomeric interface modulation causes misregulation of purine 5 -nucleotidase in relapsed leukemia.
Bmc Biol., 14, 2016
8W3V
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Crystal structure of human WDR41
分子名称: WD repeat-containing protein 41
著者Hutchinson, A, Dong, A, Li, Y, Seitova, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-02-22
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human WDR41
To be published
8VXY
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Structure of HamA(E138A,K140A)B-plasmid DNA complex from the Escherichia coli Hachiman defense system
分子名称: ADENOSINE-5'-TRIPHOSPHATE, HamA, HamB, ...
著者Tuck, O.T, Hu, J.J, Doudna, J.A.
登録日2024-02-06
公開日2024-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Hachiman is a genome integrity sensor.
Biorxiv, 2024
6NBG
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2.05 Angstrom Resolution Crystal Structure of Hypothetical Protein KP1_5497 from Klebsiella pneumoniae.
分子名称: CHLORIDE ION, Glucosamine-6-phosphate deaminase, PHOSPHATE ION
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-12-07
公開日2018-12-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6NBY
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T.elongatus NDH (composite model)
分子名称: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase chain 4 1, NAD(P)H-quinone oxidoreductase subunit 1, ...
著者Laughlin, T.G, Bayne, A, Trempe, J.-F, Savage, D.F, Davies, K.M.
登録日2018-12-10
公開日2019-02-27
最終更新日2020-04-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the complex I-like molecule NDH of oxygenic photosynthesis.
Nature, 566, 2019
8VXA
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Structure of HamB-DNA complex, conformation 1, from the Escherichia coli Hachiman defense system
分子名称: DNA (40-MER), HamB
著者Tuck, O.T, Doudna, J.A.
登録日2024-02-03
公開日2024-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Hachiman is a genome integrity sensor.
Biorxiv, 2024
8WM0
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Crystal structure of TNIK-thiopeptide wTP3 complex
分子名称: ADENOSINE, THIOPEPTIDE wTP3, TRAF2 and NCK-interacting protein kinase
著者Hamada, K, Kobayashi, S, Vinogradov, A.A, Zhang, Y, Goto, Y, Suga, H, Ogata, K, Sengoku, T.
登録日2023-10-01
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Compact Reprogrammed Genetic Code for De Novo Discovery of Proteolytically Stable Thiopeptides.
J.Am.Chem.Soc., 2024
4I60
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Crystal structure of avidin - biotinylruthenocene complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}cyclopentadienyl]ruthenium
著者Strzelczyk, P, Bujacz, A, Bujacz, G.
登録日2012-11-29
公開日2013-08-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural investigation of the interactions of biotinylruthenocene with avidin.
Chem.Biol.Interact, 204, 2013
6CUV
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Engineered Holo TrpB from Pyrococcus furiosus, PfTrpB7E6
分子名称: PHOSPHATE ION, SODIUM ION, Tryptophan synthase beta chain 1
著者Scheele, R.A, Buller, A.R, Boville, C.E, Arnold, F.H.
登録日2018-03-26
公開日2018-09-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Engineered Biosynthesis of beta-Alkyl Tryptophan Analogues.
Angew. Chem. Int. Ed. Engl., 57, 2018

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