Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88608 件

2J10
DownloadVisualize
BU of 2j10 by Molmil
p53 tetramerization domain mutant T329F Q331K
分子名称: CELLULAR TUMOR ANTIGEN P53
著者Carbajo, R.J, Mora, P, Sanchez del Pino, M.M, Perez-Paya, E, Pineda-Lucena, A.
登録日2006-08-08
公開日2007-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solvent-exposed residues located in the beta-sheet modulate the stability of the tetramerization domain of p53--a structural and combinatorial approach.
Proteins, 71, 2008
5K6P
DownloadVisualize
BU of 5k6p by Molmil
The NMR structure of the m domain tri-helix bundle and C2 of human cardiac Myosin Binding Protein C
分子名称: Myosin-binding protein C, cardiac-type
著者Michie, K.A, Kwan, A.H, Tung, C.S, Guss, J.M, Trewhella, J.
登録日2016-05-25
公開日2016-11-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Highly Conserved Yet Flexible Linker Is Part of a Polymorphic Protein-Binding Domain in Myosin-Binding Protein C.
Structure, 24, 2016
6PSU
DownloadVisualize
BU of 6psu by Molmil
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi2) with TraR and rpsT P2 promoter
分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A.
登録日2019-07-13
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Stepwise Promoter Melting by Bacterial RNA Polymerase.
Mol.Cell, 78, 2020
5KJ5
DownloadVisualize
BU of 5kj5 by Molmil
Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+
分子名称: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
登録日2016-06-17
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
6PXI
DownloadVisualize
BU of 6pxi by Molmil
The crystal structure of a singly capped HslUV complex with an axial pore plug and a HslU E257Q mutation
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU, ATP-dependent protease subunit HslV, ...
著者Baytshtok, V, Grant, R.A, Sauer, R.T.
登録日2019-07-26
公開日2020-07-29
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.447 Å)
主引用文献Heat activates the AAA+ HslUV protease by melting an axial autoinhibitory plug.
Cell Rep, 34, 2021
2IJC
DownloadVisualize
BU of 2ijc by Molmil
Structure of a Conserved Protein of Unknown Function PA0269 from Pseudomonas aeruginosa
分子名称: Hypothetical protein
著者Binkowski, T.A, Xu, X, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-09-29
公開日2006-12-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Crystal Structure of a Conserved Hypothetical Protein PA0269 from Pseudomonas aeruginosa
To be Published
5KMD
DownloadVisualize
BU of 5kmd by Molmil
Structure of CavAb in complex with amlodipine
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein, ...
著者Tang, L, Gamal EL-Din, T.M, Swanson, T.M, Pryde, D.C, Scheuer, T, Zheng, N, Catterall, W.A.
登録日2016-06-26
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs.
Nature, 537, 2016
4ILK
DownloadVisualize
BU of 4ilk by Molmil
Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MANGANESE (II) ION, Starvation sensing protein rspB, ...
著者Lukk, T, Wichelecki, D, Imker, H.J, Gerlt, J.A, Nair, S.K.
登録日2012-12-31
公開日2013-01-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
To be Published
4RCV
DownloadVisualize
BU of 4rcv by Molmil
M. tuberculosis 1-deoxy-d-xylulose-5-phosphate reductoisomerase bound to 1-deoxy-L-erythrulose
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 1-deoxy-L-erythrulose, MANGANESE (II) ION, ...
著者Gulick, A.M, Allen, C.L, Kholodar, S.A, Murkin, A.S.
登録日2014-09-17
公開日2015-03-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.294 Å)
主引用文献The role of phosphate in a multistep enzymatic reaction: reactions of the substrate and intermediate in pieces.
J.Am.Chem.Soc., 137, 2015
2IHD
DownloadVisualize
BU of 2ihd by Molmil
Crystal structure of Human Regulator of G-protein signaling 8, RGS8
分子名称: CHLORIDE ION, Regulator of G-protein signaling 8
著者Turnbull, A.P, Papagrigoriou, E, Ugochukwu, E, Salah, E, Gileadi, C, Burgess, N, Bhatia, C, Gileadi, O, Bray, J, Elkins, J, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2006-09-26
公開日2006-11-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2W5P
DownloadVisualize
BU of 2w5p by Molmil
DraE Adhesin in complex with Chloramphenicol Succinate (monoclinic form)
分子名称: CHLORAMPHENICOL SUCCINATE, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, SULFATE ION
著者Pettigrew, D.M, Roversi, P, Davies, S.G, Russell, A.J, Lea, S.M.
登録日2008-12-11
公開日2009-06-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Structural Study of the Interaction between the Dr Haemagglutinin Drae and Derivatives of Chloramphenicol
Acta Crystallogr.,Sect.D, 65, 2009
3ZLT
DownloadVisualize
BU of 3zlt by Molmil
Crystal structure of acetylcholinesterase in complex with RVX
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
著者Artursson, E, Andersson, P.O, Akfur, C, Linusson, A, Borjegren, S, Ekstrom, F.
登録日2013-02-04
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Catalytic-Site Conformational Equilibrium in Nerve-Agent Adducts of Acetylcholinesterase; Possible Implications for the Hi-6 Antidote Substrate Specificity.
Biochem.Pharmacol., 85, 2013
4RHA
DownloadVisualize
BU of 4rha by Molmil
Structure of the C-terminal domain of outer-membrane protein OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Outer membrane protein A, ...
著者Cuff, M.E, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-10-01
公開日2014-10-29
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017
5D3M
DownloadVisualize
BU of 5d3m by Molmil
Folate ECF transporter: AMPPNP bound state
分子名称: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT, ...
著者Guskov, A, Swier, L.J.Y.M, Slotboom, D.J.
登録日2015-08-06
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.303 Å)
主引用文献Structural insight in the toppling mechanism of an energy-coupling factor transporter.
Nat Commun, 7, 2016
7BNN
DownloadVisualize
BU of 7bnn by Molmil
Open conformation of D614G SARS-CoV-2 spike with 1 Erect RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2021-01-22
公開日2021-02-03
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The effect of the D614G substitution on the structure of the spike glycoprotein of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 118, 2021
6W6R
DownloadVisualize
BU of 6w6r by Molmil
WT HTLV-1 Protease in Complex with UMass6 (UM6)
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{[(4-aminophenyl)sulfonyl](2-ethylbutyl)amino}-1-benzyl-2-hydroxypropyl]carbamate, HTLV-1 Protease
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Nalivaika, E.A, Ali, A, KurtYilmaz, N, Schiffer, C.A.
登録日2020-03-17
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献To Be Determined
To Be Published
6PSR
DownloadVisualize
BU of 6psr by Molmil
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1) with TraR and rpsT P2 promoter
分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A.
登録日2019-07-13
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Stepwise Promoter Melting by Bacterial RNA Polymerase.
Mol.Cell, 78, 2020
5KOQ
DownloadVisualize
BU of 5koq by Molmil
Discovery of TAK-272: A Novel, Potent and Orally Active Renin In-hibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-~{tert}-butyl-4-(furan-2-ylmethylamino)-~{N}-(2-methylpropyl)-~{N}-[(3~{S})-piperidin-3-yl]pyrimidine-5-carboxamide, DI(HYDROXYETHYL)ETHER, ...
著者Snell, G.P, Behnke, C.A, Okada, K, Hideyuki, O, Sang, B.-C, Lane, W.
登録日2016-07-01
公開日2016-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based design of a new series of N-(piperidin-3-yl)pyrimidine-5-carboxamides as renin inhibitors.
Bioorg.Med.Chem., 24, 2016
6PTK
DownloadVisualize
BU of 6ptk by Molmil
Crystal structure of the sulfatase PsS1_NC C84A with bound sulfate ion
分子名称: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-O-sulfo-beta-D-galactopyranose, ...
著者Hettle, A.G, Boraston, A.B.
登録日2019-07-16
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6W6S
DownloadVisualize
BU of 6w6s by Molmil
WT HTLV-1 Protease in Complex with Phosphonated UMass6 (PU6)
分子名称: HTLV-1 Protease, diethyl [(4-{(2S,3R)-4-{[(4-aminophenyl)sulfonyl](2-ethylbutyl)amino}-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxybutyl}phenoxy)methyl]phosphonate
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Nalivaika, E.A, Ali, A, KurtYilmaz, N, Schiffer, C.A.
登録日2020-03-17
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献To Be Determined
To Be Published
6PU8
DownloadVisualize
BU of 6pu8 by Molmil
Room temperature X-ray structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate of keto-darunavir
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S)-4-{[(4-aminophenyl)sulfonyl](2-methylpropyl)amino}-3,3-dihydroxy-1-phenylbutan-2-yl]carbamate, HIV-1 protease
著者Kovalevsky, A, Das, A.
登録日2019-07-17
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Visualizing Tetrahedral Oxyanion Bound in HIV-1 Protease Using Neutrons: Implications for the Catalytic Mechanism and Drug Design.
Acs Omega, 5, 2020
1T7J
DownloadVisualize
BU of 1t7j by Molmil
crystal structure of inhibitor amprenavir in complex with a multi-drug resistant variant of HIV-1 protease (L63P/V82T/I84V)
分子名称: ACETATE ION, Pol Polyprotein, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
著者King, N.M, Prabu-Jeyabalan, M, Nalivaika, E.A, Wigerinck, P.B.T.P, De Bethune, M.-P, Schiffer, C.A.
登録日2004-05-10
公開日2005-05-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery and selection of TMC114, a next generation HIV-1 protease inhibitor
J.Med.Chem., 48, 2005
3ZN8
DownloadVisualize
BU of 3zn8 by Molmil
Structural Basis of Signal Sequence Surveillance and Selection by the SRP-SR Complex
分子名称: 4.5 S RNA, DIPEPTIDYL AMINOPEPTIDASE B, MAGNESIUM ION, ...
著者von Loeffelholz, O, Knoops, K, Ariosa, A, Zhang, X, Karuppasamy, M, Huard, K, Schoehn, G, Berger, I, Shan, S.O, Schaffitzel, C.
登録日2013-02-13
公開日2013-03-06
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structural Basis of Signal Sequence Surveillance and Selection by the Srp-Sr Complex
Nat.Struct.Mol.Biol., 20, 2013
3ZSF
DownloadVisualize
BU of 3zsf by Molmil
Crystal structure of the L-cystine solute receptor of Neisseria gonorrhoeae in the unliganded open conformation
分子名称: ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID
著者Bulut, H, Moniot, S, Scheffel, F, Gathmann, S, Licht, A, Saenger, W, Schneider, E.
登録日2011-06-27
公開日2011-12-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal Structures of Two Solute Receptors for L-Cystine and L-Cysteine, Respectively, of the Human Pathogen Neisseria Gonorrhoeae.
J.Mol.Biol., 415, 2012
2IL1
DownloadVisualize
BU of 2il1 by Molmil
Crystal structure of a predicted human GTPase in complex with GDP
分子名称: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Wang, J, Shen, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2006-10-02
公開日2006-10-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a predicted human GTPase in complex with GDP
To be Published

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon