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PDB: 88608 件

4QVB
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Mycobacterium tuberculosis protein Rv1155 in complex with co-enzyme F420
分子名称: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, COENZYME F420, ...
著者Mashalidis, E.H, Gittis, A.G, Tomczak, A, Abell, C, Barry III, C.E, Garboczi, D.N.
登録日2014-07-14
公開日2015-02-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular insights into the binding of coenzyme F420 to the conserved protein Rv1155 from Mycobacterium tuberculosis.
Protein Sci., 24, 2015
1THA
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MECHANISM OF MOLECULAR RECOGNITION. STRUCTURAL ASPECTS OF 3,3'-DIIODO-L-THYRONINE BINDING TO HUMAN SERUM TRANSTHYRETIN
分子名称: 3,3'-DEIODO-THYROXINE, TRANSTHYRETIN
著者Wojtczak, A, Luft, J, Cody, V.
登録日1991-11-21
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanism of molecular recognition. Structural aspects of 3,3'-diiodo-L-thyronine binding to human serum transthyretin.
J.Biol.Chem., 267, 1992
3X2N
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Proton relay pathway in inverting cellulase
分子名称: Endoglucanase V-like protein, SULFATE ION
著者Nakamura, A, Ishida, T, Fushinobu, S, Igarashi, K, Samejima, M.
登録日2014-12-22
公開日2015-10-14
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
5KCT
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Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with an N-ethyl, 4-chlorobenzyl OBHS-N derivative
分子名称: (1R,2S,4R)-N-(4-chlorophenyl)-N-ethyl-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, (1S,2R,4S)-N-(4-chlorophenyl)-N-ethyl-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor, ...
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Dharmarajan, V, Goswami, D, Kastrati, I, Novick, S, Nowak, J, Zhou, H.B, Boonmuen, N, Zhao, Y, Min, J, Frasor, J, Katzenellenbogen, B.S, Griffin, P.R, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-06-07
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Full antagonism of the estrogen receptor without a prototypical ligand side chain.
Nat. Chem. Biol., 13, 2017
2IGQ
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Human euchromatic histone methyltransferase 1
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, euchromatic histone methyltransferase 1
著者Min, J, Wu, H, Antoshenko, T, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-09-23
公開日2006-10-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural biology of human H3K9 methyltransferases
Plos One, 5, 2010
5KD5
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BT_4244 metallopeptidase from Bacteroides thetaiotaomicron
分子名称: 1,2-ETHANEDIOL, Metallopeptidase, PHOSPHATE ION, ...
著者Noach, I, Boraston, A.B.
登録日2016-06-07
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5KF9
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X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum in complex with N-acetylglucosamine
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACID, ...
著者Dopkins, B.J, Thoden, J.B, Holden, H.M, Tipton, P.A.
登録日2016-06-12
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase.
Biochemistry, 55, 2016
6W3T
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Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-norvaline
分子名称: GLYCEROL, Methyl-accepting chemotaxis protein, NORVALINE, ...
著者Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
登録日2020-03-09
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
3EQB
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BU of 3eqb by Molmil
X-ray structure of the human mitogen-activated protein kinase kinase 1 (MEK1) in a complex with ligand and MgATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, ...
著者Ohren, J.F, Pavlovsky, A, Zhang, E.
登録日2008-09-30
公開日2008-11-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献2-Alkylamino- and alkoxy-substituted 2-amino-1,3,4-oxadiazoles-O-Alkyl benzohydroxamate esters replacements retain the desired inhibition and selectivity against MEK (MAP ERK kinase).
Bioorg.Med.Chem.Lett., 18, 2008
4RBP
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BU of 4rbp by Molmil
Crystal structure of HIV neutralizing antibody 2G12 in complex with a bacterial oligosaccharide analog of mammalian oligomanose
分子名称: Fab 2G12 heavy chain, Fab 2G12 light chain, GLYCEROL, ...
著者Stanfield, R.L, Wilson, I.A, De Castro, C, Marzaioli, A.M, Pantophlet, R.
登録日2014-09-12
公開日2014-11-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of the HIV neutralizing antibody 2G12 in complex with a bacterial oligosaccharide analog of mammalian oligomannose.
Glycobiology, 25, 2015
5KGJ
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X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum in complex with galactosamine
分子名称: 1,2-ETHANEDIOL, 2-amino-2-deoxy-alpha-D-galactopyranose, 3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACID, ...
著者Dopkins, B.J, Thoden, J.B, Tipton, P.A, Holden, H.M.
登録日2016-06-13
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase.
Biochemistry, 55, 2016
4IJD
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Crystal structure of methyltransferase domain of human PR domain-containing protein 9
分子名称: Histone-lysine N-methyltransferase PRDM9, UNKNOWN ATOM OR ION, ZINC ION
著者Dong, A, Dombrovski, L, Li, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
登録日2012-12-21
公開日2013-02-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of methyltransferase domain of human PR domain-containing protein 9
To be Published
6VQ2
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BU of 6vq2 by Molmil
HLA-B*27:05 presenting an HIV-1 14mer peptide
分子名称: 14-mer peptide, Beta-2-microglobulin, GLYCEROL, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-04
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
6VQD
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HLA-B*27:05 presenting an HIV-1 8mer peptide
分子名称: 8-mer peptide, Beta-2-microglobulin, GLYCEROL, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-05
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
6VQE
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BU of 6vqe by Molmil
HLA-B*27:05 presenting an HIV-1 13mer peptide
分子名称: 13-mer peptide, Beta-2-microglobulin, GLYCEROL, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-05
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
7AN6
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BU of 7an6 by Molmil
Enzyme of biosynthetic pathway
分子名称: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, Chorismate dehydratase, GLYCEROL
著者Archna, A, Breithaupt, C, Stubbs, M.T.
登録日2020-10-11
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Mechanism of chorismate dehydratase MqnA, the first enzyme of the futalosine pathway, proceeds via substrate-assisted catalysis
J.Biol.Chem., 2022
3EOZ
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BU of 3eoz by Molmil
Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w
分子名称: GLYCEROL, PHOSPHATE ION, putative Phosphoglycerate mutase
著者Wernimont, A.K, Tempel, W, Lam, A, Zhao, Y, Lew, J, Lin, Y.H, Wasney, G, Vedadi, M, Kozieradzki, I, Cossar, D, Schapira, M, Weigelt, J, Arrowsmith, C.H, Bochkarev, A, Edwards, A.M, Hui, R, Pizarro, J, Hills, T, Structural Genomics Consortium (SGC)
登録日2008-09-29
公開日2008-11-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Characterization of a new phosphatase from Plasmodium.
Mol.Biochem.Parasitol., 179, 2011
6VPZ
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BU of 6vpz by Molmil
HLA-B*27:05 presenting an HIV-1 11mer peptide
分子名称: 11-mer peptide, Beta-2-microglobulin, GLYCEROL, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-04
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
5KGA
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BU of 5kga by Molmil
X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, mutant D287N, in complex with N-acetylglucosamine
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL COENZYME *A, ...
著者Dopkins, B.J, Thoden, J.B, Tipton, P.A, Holden, H.M.
登録日2016-06-13
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase.
Biochemistry, 55, 2016
2W9Y
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The structure of the lipid binding protein Ce-FAR-7 from Caenorhabditis elegans
分子名称: FATTY ACID/RETINOL BINDING PROTEIN PROTEIN 7, ISOFORM A, CONFIRMED BY TRANSCRIPT EVIDENCE, ...
著者Jordanova, R, Groves, M.R, Tucker, P.A.
登録日2009-01-30
公開日2009-10-20
最終更新日2015-04-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fatty Acid and Retinoid Binding Proteins Have Distinct Binding Pockets for the Two Types of Cargo
J.Biol.Chem., 284, 2009
7AMQ
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Crystal structure of the complex of HuJovi-1 Fab with the human TRBC2
分子名称: CHLORIDE ION, GLYCEROL, Human A6 T-cell receptor alpha chain, ...
著者Ferrari, M, Bulek, A, Bughda, R, Jha, R, Welin, M, Logan, D.T, Sewell, A, Onuoha, S, Pule, M.
登録日2020-10-09
公開日2022-04-20
最終更新日2022-04-27
実験手法X-RAY DIFFRACTION (2.353 Å)
主引用文献Structure-Guided Engineering of Immunotherapies Targeting TRBC1 and TRBC2 in T Cell Malignancies
Res Sq, 2022
6VR0
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BU of 6vr0 by Molmil
Agrobacterium Tumefaciens ADP-glucose pyrophosphorylase W106A
分子名称: GLYCEROL, Glucose-1-phosphate adenylyltransferase, SULFATE ION
著者Mascarenhas, R.N, Liu, D, Ballicora, M, Iglesias, A, Asencion, M, Figueroa, C.
登録日2020-02-06
公開日2021-02-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Agrobacterium Tumefaciens ADP-glucose pyrophosphorylase W106A
To Be Published
6Q0W
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Structure of DDB1-DDA1-DCAF15 complex bound to Indisulam and RBM39
分子名称: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, ...
著者Faust, T, Yoon, H, Nowak, R.P, Donovan, K.A, Li, Z, Cai, Q, Eleuteri, N.A, Zhang, T, Gray, N.S, Fischer, E.S.
登録日2019-08-02
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural complementarity facilitates E7820-mediated degradation of RBM39 by DCAF15.
Nat.Chem.Biol., 16, 2020
5JYT
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NMR structure of foldswitch-stablized KaiB from Thermosynechococcus elongatus
分子名称: Circadian clock protein KaiB
著者Tseng, R.D, LiWang, A.L.
登録日2016-05-15
公開日2017-03-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
7AMR
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Crystal structure of the complex of the KFN mutant of Jovi-1 Fab with human TRBC1
分子名称: CHLORIDE ION, GLYCEROL, Human Jovi-1 Fab fragment, ...
著者Ferrari, M, Bulek, A, Bughda, R, Jha, R, Welin, M, Logan, D.T, Sewell, A, Onuoha, S, Pule, M.
登録日2020-10-09
公開日2022-04-20
最終更新日2022-04-27
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Structure-Guided Engineering of Immunotherapies Targeting TRBC1 and TRBC2 in T Cell Malignancies
Res Sq, 2022

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