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PDB: 89111 件

7S4V
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Cas9 bound to 12-14MM DNA, 60 min time-point, kinked conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
登録日2021-09-09
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
6FJQ
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Adenovirus species 48, fiber knob protein
分子名称: 1,2-ETHANEDIOL, Fiber, GLYCEROL, ...
著者Rizkallah, P.J, Parker, A.L, Baker, A.T.
登録日2018-01-22
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Diversity within the adenovirus fiber knob hypervariable loops influences primary receptor interactions.
Nat Commun, 10, 2019
4S2X
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BU of 4s2x by Molmil
Structure of E. coli RppH bound to RNA and two magnesium ions
分子名称: MAGNESIUM ION, RNA (5'-R(*(APC)*GP*U)-3'), RNA pyrophosphohydrolase, ...
著者Vasilyev, N, Serganov, A.
登録日2015-01-23
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structures of RNA Complexes with the Escherichia coli RNA Pyrophosphohydrolase RppH Unveil the Basis for Specific 5'-End-dependent mRNA Decay.
J.Biol.Chem., 290, 2015
6VTC
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BU of 6vtc by Molmil
p53-specific T cell receptor
分子名称: T-cell Receptor 1a2, p53-specific T cell receptor, B-chain
著者Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
登録日2020-02-12
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
4YNO
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BU of 4yno by Molmil
Crystal structure of MAPK13 at INACTIVE FORM
分子名称: Mitogen-activated protein kinase 13
著者Miller, C.A, Brett, T.J.
登録日2015-03-10
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献IL-13-induced airway mucus production is attenuated by MAPK13 inhibition.
J.Clin.Invest., 122, 2012
6HI7
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BU of 6hi7 by Molmil
The ATAD2 bromodomain in complex with compound 10
分子名称: (2~{R})-~{N}-[5-(3-aminophenyl)-4-ethanoyl-1,3-thiazol-2-yl]-2-azanyl-propanamide, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Sledz, P, Caflisch, A.
登録日2018-08-29
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.743 Å)
主引用文献Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020
6HIC
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The ATAD2 bromodomain in complex with compound 15
分子名称: (2~{R})-~{N}-[4-ethanoyl-5-[4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]-1,3-thiazol-2-yl]piperazine-2-carboxamide, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Sledz, P, Caflisch, A.
登録日2018-08-29
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.768 Å)
主引用文献Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020
7NM8
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BU of 7nm8 by Molmil
The crystal structure of the antimycin pathway standalone ketoreductase, AntM, in complex with NADPH
分子名称: Antimycin pathway standalone ketoreductase, AntM, GLYCEROL, ...
著者Fazal, A, Hemsworth, G.R, Webb, M.E, Seipke, R.F.
登録日2021-02-23
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Standalone beta-Ketoreductase Acts Concomitantly with Biosynthesis of the Antimycin Scaffold.
Acs Chem.Biol., 16, 2021
8SIO
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BU of 8sio by Molmil
Crystal structure of PRMT3 with YD1-66
分子名称: 5'-S-{3-[N'-(4'-chloro[1,1'-biphenyl]-3-yl)carbamimidamido]propyl}-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Arrowsmith, C.H, Edwards, A.M, Deng, Y, Huang, R, Min, J.
登録日2023-04-16
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of PRMT3 with YD1-66
To be published
6W0B
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BU of 6w0b by Molmil
Open-gate KcsA soaked in 2 mM BaCl2
分子名称: BARIUM ION, Fab Heavy Chain, Fab Light Chain, ...
著者Rohaim, A, Gong, L, Li, J.
登録日2020-02-29
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.604 Å)
主引用文献Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
6HIZ
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BU of 6hiz by Molmil
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (143-MER), ...
著者Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boehringer, A, Schneider, A, Ban, N.
登録日2018-08-31
公開日2018-09-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
5ET6
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BU of 5et6 by Molmil
Human muscle fructose-1,6-bisphosphatase in inactive T-state in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Fructose-1,6-bisphosphatase isozyme 2
著者Barciszewski, J, Wisniewski, J, Kolodziejczyk, R, Dzugaj, A, Jaskolski, M, Rakus, D.
登録日2015-11-17
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.845 Å)
主引用文献T-to-R switch of muscle fructose-1,6-bisphosphatase involves fundamental changes of secondary and quaternary structure.
Acta Crystallogr D Struct Biol, 72, 2016
5L8B
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BU of 5l8b by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant E62A
分子名称: CALCIUM ION, Uncharacterized protein
著者He, D, Hughes, S, Vanden-Hehir, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
登録日2016-06-07
公開日2016-08-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016
7KBY
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BU of 7kby by Molmil
Artificial Metalloproteins with Dinuclear Iron Centers
分子名称: ACETATE ION, CYANIDE ION, Streptavidin, ...
著者Miller, K.R, Follmer, A.H, Jasniewski, A.J, Sabuncu, S, Biswas, S, Albert, T, Hendrich, M.P, Moenne-Loccoz, P, Borovik, A.S.
登録日2020-10-03
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.
J.Am.Chem.Soc., 143, 2021
6BZH
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BU of 6bzh by Molmil
Structure of mouse RIG-I tandem CARDs
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Probable ATP-dependent RNA helicase DDX58
著者Kershaw, N.J, D'Cruz, A.A, Babon, J.J, Nicholson, S.E.
登録日2017-12-24
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of a second binding site on the TRIM25 B30.2 domain.
Biochem. J., 475, 2018
5ET7
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BU of 5et7 by Molmil
Human muscle fructose-1,6-bisphosphatase in inactive T-state
分子名称: Fructose-1,6-bisphosphatase isozyme 2
著者Barciszewski, J, Wisniewski, J, Kolodziejczyk, R, Dzugaj, A, Jaskolski, M, Rakus, D.
登録日2015-11-17
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献T-to-R switch of muscle fructose-1,6-bisphosphatase involves fundamental changes of secondary and quaternary structure.
Acta Crystallogr D Struct Biol, 72, 2016
6R8I
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BU of 6r8i by Molmil
PP4R3A EVH1 domain bound to FxxP motif
分子名称: SER-LEU-PRO-PHE-THR-PHE-LYS-VAL-PRO-ALA-PRO-PRO-PRO-SER-LEU-PRO-PRO-SER, Serine/threonine-protein phosphatase 4 regulatory subunit 3A
著者Ueki, Y, Kruse, T, Weisser, M.B, Sundell, G.N, Yoo Larsen, M.S, Lopez Mendez, B, Jenkins, N.P, Garvanska, D.H, Cressey, L, Zhang, G, Davey, N, Montoya, G, Ivarsson, Y, Kettenbach, A, Nilsson, J.
登録日2019-04-02
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.517 Å)
主引用文献A Consensus Binding Motif for the PP4 Protein Phosphatase.
Mol.Cell, 76, 2019
5ETA
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BU of 5eta by Molmil
Structure of MAPK14 with bound the KIM domain of the Toxoplasma protein GRA24
分子名称: Mitogen-activated protein kinase 14, Putative transmembrane protein
著者Pellegrini, E, Palencia, A, Braun, L, Kapp, U, Bougdour, A, Belrhali, H, Bowler, M.W, Hakimi, M.
登録日2015-11-17
公開日2016-10-26
最終更新日2019-02-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for the Subversion of MAP Kinase Signaling by an Intrinsically Disordered Parasite Secreted Agonist.
Structure, 25, 2017
7NM7
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BU of 7nm7 by Molmil
The crystal structure of the antimycin pathway standalone ketoreductase, AntM
分子名称: Antimycin pathway standalone ketoreductase enzyme, AntM
著者Fazal, A, Hemsworth, G.R, Webb, M.E, Seipke, R.F.
登録日2021-02-23
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Standalone beta-Ketoreductase Acts Concomitantly with Biosynthesis of the Antimycin Scaffold.
Acs Chem.Biol., 16, 2021
8SPW
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BU of 8spw by Molmil
PS3 F1 Rotorless, low ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
著者Sobti, M, Stewart, A.G.
登録日2023-05-03
公開日2024-01-24
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
4YQK
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BU of 4yqk by Molmil
Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
分子名称: 4-amino-N-(piperidin-4-yl)-1,2,5-oxadiazole-3-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
著者Elkins, P.A, Bonnette, W.G, Madauss, K.P, Stuckey, J.A.
登録日2015-03-13
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
To Be Published
6FGH
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BU of 6fgh by Molmil
Crystal Structure of BAZ2A bromodomain in complex with 3-amino-2-methylpyridine derivative 1
分子名称: 2-methyl-~{N}-[(2~{R})-1-methylsulfonylpropan-2-yl]pyridin-3-amine, Bromodomain adjacent to zinc finger domain protein 2A
著者Dalle Vedove, A, Marchand, J.-R, Lolli, G, Caflisch, A.
登録日2018-01-10
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Analysis of Small-Molecule Binding to the BAZ2A and BAZ2B Bromodomains.
ChemMedChem, 13, 2018
5UU5
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BU of 5uu5 by Molmil
Bacteriophage P22 mature virion capsid protein
分子名称: Major capsid protein
著者Hryc, C.F, Chen, D.-H, Afonine, P.V, Jakana, J, Wang, Z, Haase-Pettingell, C, Jiang, W, Adams, P.D, King, J.A, Schmid, M.F, Chiu, W.
登録日2017-02-16
公開日2017-03-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Accurate model annotation of a near-atomic resolution cryo-EM map.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8KH3
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BU of 8kh3 by Molmil
Crystal Structure of Kemp Eliminase HG3.17 in complexed with 5-cyanobenzotriazole
分子名称: 1H-benzotriazole-5-carbonitrile, Kemp Eliminase HG3.17, SULFATE ION
著者Bunzel, A, Mori, T, Hilvert, D.
登録日2023-08-21
公開日2024-09-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evolution of preorganized electric fields boosts catalysis in a designer enzyme
To Be Published
8V5C
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BU of 8v5c by Molmil
IpaD (122-321) Bound to Deoxycholate
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, GLYCEROL, Invasin IpaD
著者Barker, S.A, Dickenson, N.E, Johnson, S.J.
登録日2023-11-30
公開日2024-08-21
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural and functional characterization of the IpaD pi-helix reveals critical roles in DOC interaction, T3SS apparatus maturation, and Shigella virulence.
J.Biol.Chem., 2024

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件を2024-09-11に公開中

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