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PDB: 89346 results

7ZT7
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BU of 7zt7 by Molmil
Structure of E8 TCR in complex in human MR1 bound to 5FSA
Descriptor: 1,2-ETHANEDIOL, 2-hydroxy-5-methylbenzoic acid, Beta-2-microglobulin, ...
Authors:Karuppiah, V, Robinson, R.A.
Deposit date:2022-05-09
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Promiscuous recognition of MR1 drives self-reactive mucosal-associated invariant T cell responses.
J.Exp.Med., 220, 2023
8RGE
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BU of 8rge by Molmil
Serial synchrotron in plate room temperature structure of Lysozyme.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Thompson, A.J, Hough, M.A, Sanchez-Weatherby, J, Williams, L.J, Sandy, J, Worrall, J.A.R.
Deposit date:2023-12-13
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
7T6W
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BU of 7t6w by Molmil
Crystal structure of Chaetomium Glucosidase I (apo)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, GLYCEROL, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2021-12-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of Endoplasmic Reticulum alpha-Glucosidase I from a Thermophilic Fungus as a Platform for Structure-Guided Antiviral Drug Design.
Biochemistry, 61, 2022
3M8R
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BU of 3m8r by Molmil
Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in a closed ternary complex with trapped 4'-ethylated dTTP
Descriptor: 4'-ethylthymidine 5'-(tetrahydrogen triphosphate), ACETATE ION, DNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), ...
Authors:Diederichs, K, Marx, A, Betz, K.
Deposit date:2010-03-19
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of DNA polymerases caught processing size-augmented nucleotide probes.
Angew.Chem.Int.Ed.Engl., 49, 2010
4TTA
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BU of 4tta by Molmil
Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 2 FMC molecules
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type, ...
Authors:Stefanic, Z, Bzowska, A.
Deposit date:2014-06-20
Release date:2015-07-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
3MA8
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BU of 3ma8 by Molmil
Crystal structure of CGD1_2040, a pyruvate kinase from cryptosporidium Parvum
Descriptor: CITRIC ACID, Pyruvate kinase, SULFATE ION
Authors:Wernimont, A.K, Hutchinson, A, Hassanali, A, Kozieradzki, I, Cossar, D, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Hills, T, Pizarro, J.C, Structural Genomics Consortium (SGC)
Deposit date:2010-03-23
Release date:2010-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of CGD1_2040, a pyruvate kinase from cryptosporidium Parvum
To be Published
6MKV
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BU of 6mkv by Molmil
Crystal structure of Retinal-bound holo Q108K:K40L:T51W domain-swapped dimer of human cellular retinol binding protein 2
Descriptor: ACETATE ION, GLYCEROL, RETINAL, ...
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2018-09-26
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.107 Å)
Cite:Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019
6MQN
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BU of 6mqn by Molmil
Crystal structure of KRAS V14I-GDP demonstrating disorder switch 1 conformation - Form 2
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE
Authors:Bera, A.K, Westover, K.D.
Deposit date:2018-10-10
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of the atypical activation mechanism of KRASV14I.
J.Biol.Chem., 294, 2019
6W9S
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BU of 6w9s by Molmil
Crystal structure of an OTU deubiquitinase from Escherichia albertii bound to ubiquitin
Descriptor: FORMIC ACID, OTU domain-containing protein EschOTU, Ubiquitin
Authors:Schubert, A.F, Pruneda, J.N, Komander, D.
Deposit date:2020-03-23
Release date:2020-07-01
Last modified:2020-08-12
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification and characterization of diverse OTU deubiquitinases in bacteria.
Embo J., 39, 2020
5FQP
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BU of 5fqp by Molmil
Selective estrogen receptor downregulator antagonists: Tetrahydroisoquinoline phenols 1.
Descriptor: (E)-3-[4-[(1R,3R)-6-hydroxy-2-isobutyl-3-methyl-3,4-dihydro-1H-isoquinolin-1-yl]phenyl]prop-2-enoic acid, ESTROGEN RECEPTOR ALPHA
Authors:Scott, J.S, Bailey, A, Davies, R.D.M, Degorce, S.L, MacFaul, P.A, Gingell, H, Moss, T, Norman, R.A, Pink, J.H, Rabow, A.A, Roberts, B, Smith, P.D.
Deposit date:2015-12-14
Release date:2016-02-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Tetrahydroisoquinoline Phenols: Selective Estrogen Receptor Downregulator Antagonists with Oral Bioavailability in Rat.
Acs Med.Chem.Lett., 7, 2016
6TNH
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BU of 6tnh by Molmil
Deoxyguanylosuccinate synthase (DgsS) quaternary structure with AMPPcP, dGMP, Asp, Magnesium at 2.21 Angstrom resolution
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ASPARTIC ACID, Adenylosuccinate synthetase, ...
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2019-12-08
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Science, 372, 2021
7ZGF
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BU of 7zgf by Molmil
Crystal Structure of Amycolatopsis jejuensis Multiple Inositol Polyphosphate Phosphatase, apo-protein
Descriptor: Multiple inositol-polyphosphate phosphatase
Authors:Acquistapace, I.M, Brearley, C.A, Hemmings, A.M.
Deposit date:2022-04-03
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Amycolatopsis jejuensis Multiple Inositol Polyphosphate Phosphatase, apo-protein
To Be Published
8OK3
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BU of 8ok3 by Molmil
Structure of the C-terminal domain of the Bdellovibrio bacteriovorus Bd2133 fibre
Descriptor: Bd2133, CHLORIDE ION, SODIUM ION, ...
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-03-27
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
5F8K
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BU of 5f8k by Molmil
Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Seefeldt, A.C, Graf, M, Perebaskine, N, Nguyen, F, Arenz, S, Mardirossian, M, Scocchi, M, Wilson, D.N, Innis, C.A.
Deposit date:2015-12-09
Release date:2016-02-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome.
Nucleic Acids Res., 44, 2016
4RKE
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BU of 4rke by Molmil
Drosophila melanogaster Rab2 bound to GMPPNP
Descriptor: GH01619p, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Lardong, J.A, Driller, J.H, Depner, H, Weise, C, Petzoldt, A, Wahl, M.C, Sigrist, S.J, Loll, B.
Deposit date:2014-10-13
Release date:2014-12-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.0006 Å)
Cite:Structures of Drosophila melanogaster Rab2 and Rab3 bound to GMPPNP.
Acta Crystallogr F Struct Biol Commun, 71, 2015
8C0N
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BU of 8c0n by Molmil
Crystal structure of the red form of the mTagFT fluorescent timer
Descriptor: Blue-to-red TagFT fluorescent timer
Authors:Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Agapova, Y.K, Subach, O.M, Popov, V.O, Subach, F.V.
Deposit date:2022-12-19
Release date:2023-03-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Blue-to-Red TagFT, mTagFT, mTsFT, and Green-to-FarRed mNeptusFT2 Proteins, Genetically Encoded True and Tandem Fluorescent Timers.
Int J Mol Sci, 24, 2023
4RQ7
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BU of 4rq7 by Molmil
Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dATP soaked with MgCl2 for 1hr
Descriptor: ACETATE ION, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Vyas, R, Reed, A.J, Suo, Z.
Deposit date:2014-10-31
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.
J.Am.Chem.Soc., 137, 2015
4RRC
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BU of 4rrc by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA (snapshot 3)
Descriptor: 3'-deoxy-3'-(L-threonylamino)adenosine, Probable threonine--tRNA ligase 2
Authors:Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
8SMS
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BU of 8sms by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase, FabB, and cerulenin crosslinker-crypto Acyl Carrier Protein, AcpP
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 1, Acyl carrier protein, N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-{2-[(2R)-2-hydroxy-4-oxododecanamido]ethyl}-beta-alaninamide
Authors:Jiang, Z, Chen, A, Chen, J, Sekhon, A, Louie, G.V, Noel, J.P, La Clair, J.J, Burkart, M.D.
Deposit date:2023-04-26
Release date:2023-09-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Masked cerulenin enables a dual-site selective protein crosslink.
Chem Sci, 14, 2023
4YLI
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BU of 4yli by Molmil
CL-K1 trimer
Descriptor: CALCIUM ION, CHLORIDE ION, Collectin-11, ...
Authors:Wallis, R, Girija, U.V, Gingras, A.R, Moody, P.C.E, Marshall, J.E.
Deposit date:2015-03-05
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome.
Bmc Biol., 13, 2015
6WAT
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BU of 6wat by Molmil
complex structure of PHF1
Descriptor: Histone H3.1t peptide, PHD finger protein 1, UNKNOWN ATOM OR ION
Authors:Dong, C, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2020-03-26
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for histone variant H3tK27me3 recognition by PHF1 and PHF19.
Elife, 9, 2020
4RNX
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BU of 4rnx by Molmil
K154 Circular Permutation of Old Yellow Enzyme
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NADPH dehydrogenase 1
Authors:Horton, J.R, Daugherty, A.B, Cheng, X, Lutz, S.
Deposit date:2014-10-26
Release date:2015-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:STRUCTURAL AND FUNCTIONAL CONSEQUENCES OF CIRCULAR PERMUTATION ON THE ACTIVE SITE OF OLD YELLOW ENZYME.
ACS Catal, 5, 2015
5NHS
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BU of 5nhs by Molmil
The crystal structure of Xanthomonas albilineans N5, N10-methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD)
Descriptor: 1,2-ETHANEDIOL, Bifunctional protein FolD
Authors:Bueno, R.V, Guido, R.V.C, Maluf, F.V, Lima, G.M.A, Oliveira, A.A.
Deposit date:2017-03-22
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The crystal structure of Xanthomonas albilineans N5, N10-methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD)
To Be Published
8CK0
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BU of 8ck0 by Molmil
Carin1 bacteriophage portal assembly
Descriptor: Portal protein
Authors:d'Acapito, A, Neumann, E, Schoehn, G.
Deposit date:2023-02-14
Release date:2023-03-15
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural Study of the Cobetia marina Bacteriophage 1 (Carin-1) by Cryo-EM.
J.Virol., 97, 2023
6FJ6
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BU of 6fj6 by Molmil
Structure of Thaumatin collected at 100K on ID30B
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin-1
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-20
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018

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PDB entries from 2024-10-09

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