Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88608 results

2I0S
DownloadVisualize
BU of 2i0s by Molmil
Crystal structure of aromatic amine dehydrogenase TTQ-phenylacetaldehyde adduct
Descriptor: Aromatic amine dehydrogenase, PHENYLACETALDEHYDE
Authors:Roujeinikova, A, Leys, D.
Deposit date:2006-08-11
Release date:2007-04-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:New insights into the reductive half-reaction mechanism of aromatic amine dehydrogenase revealed by reaction with carbinolamine substrates.
J.Biol.Chem., 282, 2007
7SEI
DownloadVisualize
BU of 7sei by Molmil
Glucose-6-phosphate 1-dehydrogenase (K403Q)
Descriptor: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Mathews, I.I, Garcia, A.A, Wakatsuki, S, Mochly-Rosen, D.
Deposit date:2021-09-30
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Stabilization of glucose-6-phosphate dehydrogenase oligomers enhances catalytic activity and stability of clinical variants.
J.Biol.Chem., 298, 2022
1SV4
DownloadVisualize
BU of 1sv4 by Molmil
Crystal Structure of Yan-SAM
Descriptor: Ets DNA-binding protein pokkuri
Authors:Qiao, F, Song, H, Kim, C.A, Sawaya, M.R, Hunter, J.B, Gingery, M, Rebay, I, Courey, A.J, Bowie, J.U.
Deposit date:2004-03-27
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Derepression by depolymerization; structural insights into the regulation of yan by mae.
Cell(Cambridge,Mass.), 118, 2004
3ESP
DownloadVisualize
BU of 3esp by Molmil
Human transthyretin (TTR) complexed with N-(3,5-Dibromo-4-hydroxyphenyl)-3,5-dimethyl-4-hydroxybenzamide
Descriptor: N-(3,5-dibromo-4-hydroxyphenyl)-4-hydroxy-3,5-dimethylbenzamide, Transthyretin
Authors:Connelly, S, Wilson, I.A.
Deposit date:2008-10-06
Release date:2009-04-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Toward optimization of the second aryl substructure common to transthyretin amyloidogenesis inhibitors using biochemical and structural studies.
J.Med.Chem., 52, 2009
1SW8
DownloadVisualize
BU of 1sw8 by Molmil
Solution structure of the N-terminal domain of Human N60D calmodulin refined with paramagnetism based strategy
Descriptor: CALCIUM ION, Calmodulin
Authors:Bertini, I, Del Bianco, C, Gelis, I, Katsaros, N, Luchinat, C, Parigi, G, Peana, M, Provenzani, A, Zoroddu, M.A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-03-30
Release date:2004-04-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Experimentally exploring the conformational space sampled by domain reorientation in calmodulin
Proc.Natl.Acad.Sci.USA, 101, 2004
6IV0
DownloadVisualize
BU of 6iv0 by Molmil
Crystal structure of a bacterial Bestrophin homolog from Klebsiella pneumoniae with a mutation I180A
Descriptor: Bestrophin homolog, ZINC ION
Authors:Kittredge, A, Chen, S, Yang, T.
Deposit date:2018-12-02
Release date:2019-11-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Dual Ca2+-dependent gates in human Bestrophin1 underlie disease-causing mechanisms of gain-of-function mutations.
Commun Biol, 2, 2019
6IVW
DownloadVisualize
BU of 6ivw by Molmil
Crystal structure of a bacterial Bestrophin homolog from Klebsiella pneumoniae with a mutation D269A
Descriptor: Bestrophin homolog, ZINC ION
Authors:Kittredge, A, Chen, S, Yang, T.
Deposit date:2018-12-04
Release date:2019-11-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:Dual Ca2+-dependent gates in human Bestrophin1 underlie disease-causing mechanisms of gain-of-function mutations.
Commun Biol, 2, 2019
6I5S
DownloadVisualize
BU of 6i5s by Molmil
AH, Bottromycin amidohydrolase
Descriptor: CHLORIDE ION, GLYCEROL, ZINC ION, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2018-11-14
Release date:2019-09-25
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Thiazoline-Specific Amidohydrolase PurAH Is the Gatekeeper of Bottromycin Biosynthesis.
J.Am.Chem.Soc., 141, 2019
1T0R
DownloadVisualize
BU of 1t0r by Molmil
Crystal Structure of the Toluene/o-xylene Monooxygenase Hydroxuylase from Pseudomonas stutzeri-azide bound
Descriptor: AZIDE ION, FE (III) ION, HYDROXIDE ION, ...
Authors:Sazinsky, M.H, Bard, J, Di Donato, A, Lippard, S.J.
Deposit date:2004-04-12
Release date:2004-07-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase from Pseudomonas stutzeri OX1: INSIGHT INTO THE SUBSTRATE SPECIFICITY, SUBSTRATE CHANNELING, AND ACTIVE SITE TUNING OF MULTICOMPONENT MONOOXYGENASES.
J.Biol.Chem., 279, 2004
1TKE
DownloadVisualize
BU of 1tke by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with serine
Descriptor: SERINE, Threonyl-tRNA synthetase
Authors:Dock-Bregeon, A.C, Rees, B, Torres-Larios, A, Bey, G, Caillet, J, Moras, D.
Deposit date:2004-06-08
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Achieving Error-Free Translation; The Mechanism of Proofreading of Threonyl-tRNA Synthetase at Atomic Resolution.
Mol.Cell, 16, 2004
3E5P
DownloadVisualize
BU of 3e5p by Molmil
Crystal structure of alanine racemase from E.faecalis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Alanine racemase, NONAETHYLENE GLYCOL, ...
Authors:Hwang, K.Y, Priyadarshi, A, Lee, E.H, Sung, M.W.
Deposit date:2008-08-14
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the alanine racemase from Enterococcus faecalis.
Biochim.Biophys.Acta, 1794, 2009
5KEP
DownloadVisualize
BU of 5kep by Molmil
High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes
Descriptor: Major capsid protein L1
Authors:Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
Deposit date:2016-06-10
Release date:2017-01-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
1TLL
DownloadVisualize
BU of 1tll by Molmil
CRYSTAL STRUCTURE OF RAT NEURONAL NITRIC-OXIDE SYNTHASE REDUCTASE MODULE AT 2.3 A RESOLUTION.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Garcin, E.D, Bruns, C.M, Lloyd, S.J, Hosfield, D.J, Tiso, M, Gachhui, R, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2004-06-09
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for isozyme-specific regulation of electron transfer in nitric-oxide synthase
J.Biol.Chem., 279, 2004
5DEW
DownloadVisualize
BU of 5dew by Molmil
Crystal structure of PAK1 in complex with an inhibitor compound 5
Descriptor: 8-[(trans-4-aminocyclohexyl)methyl]-6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-2-(ethylamino)pyrido[2,3-d]pyrimidin-7(8H)-one, Serine/threonine-protein kinase PAK 1
Authors:Oh, A, Tam, C, Wang, W.
Deposit date:2015-08-26
Release date:2016-09-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of Selective PAK1 Inhibitor G-5555: Improving Proper-ties by Employing an Unorthodox Low-pKa Polar Moiety
To Be Published
2HZ2
DownloadVisualize
BU of 2hz2 by Molmil
The x-ray crystal structure of ferric Synechocystis hemoglobin H117A mutant with a covalent linkage
Descriptor: CADMIUM ION, Cyanoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Hoy, J.A.
Deposit date:2006-08-08
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Covalent heme attachment in Synechocystis hemoglobin is required to prevent ferrous heme dissociation
Protein Sci., 16, 2007
1SS3
DownloadVisualize
BU of 1ss3 by Molmil
Solution structure of Ole e 6, an allergen from olive tree pollen
Descriptor: Pollen allergen Ole e 6
Authors:Trevino, M.A, Garcia-Mayoral, M.F, Barral, P, Villalba, M, Santoro, J, Rico, M, Rodriguez, R, Bruix, M.
Deposit date:2004-03-23
Release date:2004-08-03
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR Solution Structure of Ole e 6, a Major Allergen from Olive Tree Pollen.
J.Biol.Chem., 279, 2004
2I9S
DownloadVisualize
BU of 2i9s by Molmil
The solution structure of the core of mesoderm development (MESD).
Descriptor: Mesoderm development candidate 2
Authors:Koehler, C, Andersen, O, Diehl, A, Schmieder, P, Krause, G, Oschkinat, H.
Deposit date:2006-09-06
Release date:2007-05-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the core of mesoderm development (MESD), a chaperone for members of the LDLR-family
J.STRUCT.FUNCT.GENOM., 7, 2006
1SU9
DownloadVisualize
BU of 1su9 by Molmil
Reduced structure of the soluble domain of ResA
Descriptor: Thiol-disulfide oxidoreductase resA
Authors:Crow, A, Acheson, R.M, Le Brun, N.E, Oubrie, A.
Deposit date:2004-03-26
Release date:2004-05-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis of Redox-coupled Protein Substrate Selection by the Cytochrome c Biosynthesis Protein ResA.
J.Biol.Chem., 279, 2004
3EDG
DownloadVisualize
BU of 3edg by Molmil
Crystal structure of bone morphogenetic protein 1 protease domain
Descriptor: ACETYL GROUP, Bone morphogenetic protein 1, ZINC ION
Authors:Mac Sweeney, A.
Deposit date:2008-09-03
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural basis for the substrate specificity of bone morphogenetic protein 1/tolloid-like metalloproteases
To be Published
4R25
DownloadVisualize
BU of 4r25 by Molmil
Structure of B. subtilis GlnK
Descriptor: Nitrogen regulatory PII-like protein, ZINC ION
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5193 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
3EDY
DownloadVisualize
BU of 3edy by Molmil
Crystal Structure of the Precursor Form of Human Tripeptidyl-Peptidase 1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Guhaniyogi, J, Sohar, I, Das, K, Lobel, P, Stock, A.M.
Deposit date:2008-09-03
Release date:2008-11-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure and Autoactivation Pathway of the Precursor Form of Human Tripeptidyl-peptidase 1, the Enzyme Deficient in Late Infantile Ceroid Lipofuscinosis
J.Biol.Chem., 284, 2009
3EFB
DownloadVisualize
BU of 3efb by Molmil
Crystal Structure of Probable sor Operon Regulator from Shigella flexneri
Descriptor: ACETIC ACID, Probable sor-operon regulator
Authors:Kim, Y, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-09-08
Release date:2008-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Crystal Structure of Probable sor Operon Regulator from Shigella flexneri
To be Published
6W2P
DownloadVisualize
BU of 6w2p by Molmil
APE1 endonuclease product complex L104R
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Freudenthal, B.D, Whitaker, A.M.
Deposit date:2020-03-06
Release date:2020-06-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular and structural characterization of disease-associated APE1 polymorphisms.
DNA Repair (Amst.), 91-92, 2020
7S3E
DownloadVisualize
BU of 7s3e by Molmil
Solution NMR structure of uperin 3.5 in SDS micelles
Descriptor: Uperin-3.5
Authors:Rosengren, K.J, Armstrong, D.A.
Deposit date:2021-09-05
Release date:2022-06-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insight into the mechanisms underlying the membrane activity of a family of antimicrobial Uperin 3 peptides
To be published
4RCM
DownloadVisualize
BU of 4rcm by Molmil
Crystal structure of the Pho92 YTH domain in complex with m6A
Descriptor: Methylated RNA-binding protein 1, RNA (5'-R(*UP*G)-D(*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION
Authors:Tempel, W, Xu, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-09-16
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.
J.Biol.Chem., 290, 2015

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon