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PDB: 89472 results

4JHP
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BU of 4jhp by Molmil
The crystal structure of the RPGR RCC1-like domain in complex with PDE6D
Descriptor: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, X-linked retinitis pigmentosa GTPase regulator
Authors:Waetzlich, D, Vetter, I, Wittinghofer, A, Ismail, S.
Deposit date:2013-03-05
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The interplay between RPGR, PDE-delta and Arl2/3 regulate the ciliary targeting of farnesylated cargo.
Embo Rep., 14, 2013
6DY4
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BU of 6dy4 by Molmil
Fe(II)-bound structure of the engineered cyt cb562 variant, CH2E
Descriptor: FE (III) ION, HEME C, Soluble cytochrome b562
Authors:Rittle, J, Tezcan, F.A.
Deposit date:2018-07-01
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An efficient, step-economical strategy for the design of functional metalloproteins.
Nat.Chem., 11, 2019
6DEZ
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BU of 6dez by Molmil
Anti-phosphotyrosine antibody PY20-4D5 Fab complexed with sulfate
Descriptor: Anti-phosphotyrosine antibody PY20-4D5 heavy chain, Anti-phosphotyrosine antibody PY20-4D5 light chain, SULFATE ION
Authors:Mou, K, Leung, K, Wells, J.A.
Deposit date:2018-05-13
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Engineering Improved Antiphosphotyrosine Antibodies Based on an Immunoconvergent Binding Motif.
J. Am. Chem. Soc., 140, 2018
4RG9
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BU of 4rg9 by Molmil
Crystal structure of APC3-APC16 complex (Selenomethionine Derivative)
Descriptor: Anaphase-promoting complex subunit 16, Cell division cycle protein 27 homolog
Authors:Yamaguchi, M, Yu, S, Miller, D.J, Schulman, B.A.
Deposit date:2014-09-29
Release date:2014-12-24
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure of an APC3-APC16 Complex: Insights into Assembly of the Anaphase-Promoting Complex/Cyclosome.
J.Mol.Biol., 427, 2015
4YSM
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BU of 4ysm by Molmil
Calcium-Dependent Protein Kinase from Eimeria tenella
Descriptor: CALCIUM ION, Calmodulin-like domain protein kinase
Authors:Merritt, E.A.
Deposit date:2015-03-17
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:CDPK is a druggable target in the apicomplexan parasite Eimeria
to be published
2Q43
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BU of 2q43 by Molmil
Ensemble refinement of the protein crystal structure of IAA-aminoacid hydrolase from Arabidopsis thaliana gene At5g56660
Descriptor: IAA-amino acid hydrolase ILR1-like 2
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
1YJU
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BU of 1yju by Molmil
Solution structure of the apo form of the sixth soluble domain of Menkes protein
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, Migliardi, M, Rosato, A, Wang, S, Structural Proteomics in Europe (SPINE)
Deposit date:2005-01-15
Release date:2006-01-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An atomic-level investigation of the disease-causing A629P mutant of the Menkes protein, ATP7A
J.Mol.Biol., 352, 2005
6JQV
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BU of 6jqv by Molmil
Crystal structure of Arabidopsis thaliana NRP2
Descriptor: NAP1-related protein 2
Authors:Kumar, A, Vasudevan, D.
Deposit date:2019-04-01
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structural Characterization ofArabidopsis thalianaNAP1-Related Protein 2 (AtNRP2) and Comparison with its Homolog AtNRP1.
Molecules, 24, 2019
4YTU
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BU of 4ytu by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with L-erythrulose
Descriptor: D-tagatose 3-epimerase, L-Erythrulose, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
Deposit date:2015-03-18
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
1YJR
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BU of 1yjr by Molmil
Solution structure of the apo form of the sixth soluble domain A69P mutant of Menkes protein
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, Migliardi, M, Rosato, A, Wang, S, Structural Proteomics in Europe (SPINE)
Deposit date:2005-01-15
Release date:2006-01-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An atomic-level investigation of the disease-causing A629P mutant of the Menkes protein, ATP7A
J.Mol.Biol., 352, 2005
4RTX
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BU of 4rtx by Molmil
Crystal structure of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Camara-Artigas, A.
Deposit date:2014-11-16
Release date:2015-10-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystal structure of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
To be Published
3EEB
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BU of 3eeb by Molmil
Structure of the V. cholerae RTX cysteine protease domain
Descriptor: INOSITOL HEXAKISPHOSPHATE, RTX toxin RtxA, SODIUM ION
Authors:Lupardus, P.J, Shen, A, Bogyo, M, Garcia, K.C.
Deposit date:2008-09-04
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small molecule-induced allosteric activation of the Vibrio cholerae RTX cysteine protease domain
Science, 322, 2008
6DDK
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BU of 6ddk by Molmil
Crystal structure of the double mutant (D52N/R367Q) of the full-length NT5C2 in the basal state
Descriptor: Cytosolic purine 5'-nucleotidase, PHOSPHATE ION
Authors:Forouhar, F, Dieck, C.L, Tzoneva, G, Carpenter, Z, Ambesi-Impiombato, A, Sanchez-Martin, M, Kirschner-Schwabe, R, Lew, S, Seetharaman, J, Ferrando, A.A, Tong, L.
Deposit date:2018-05-10
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Mechanisms of NT5C2 Mutations Driving Thiopurine Resistance in Relapsed Lymphoblastic Leukemia.
Cancer Cell, 34, 2018
3IUG
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BU of 3iug by Molmil
Crystal structure of the RhoGAP domain of RICS
Descriptor: Rho/Cdc42/Rac GTPase-activating protein RICS, UNKNOWN ATOM OR ION
Authors:Nedyalkova, L, Tempel, W, Tong, Y, Li, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-08-31
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of the RhoGAP domain of RICS
to be published
1TKJ
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BU of 1tkj by Molmil
Streptomyces griseus aminopeptidase complexed with D-Methionine
Descriptor: Aminopeptidase, CALCIUM ION, D-METHIONINE, ...
Authors:Reiland, V, Gilboa, R, Spungin-Bialik, A, Schomburg, D, Shoham, Y, Blumberg, S, Shoham, G.
Deposit date:2004-06-08
Release date:2005-06-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Interactions of D Amino Acids with Streptomyces griseus Aminopeptidase
To be Published
2LS9
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BU of 2ls9 by Molmil
Pleurocidin-NH2
Descriptor: Pleurocidin
Authors:Vermeer, L.S, Kozlowska, J, Mason, J.A.
Deposit date:2012-04-24
Release date:2013-04-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:All Atom Simulations of the Initial Binding of Magainin and Pleurocidin to Membranes Comprising of a Mixture of Anionic and Zwitterionic Lipids
To be Published
6DDH
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BU of 6ddh by Molmil
Crystal structure of the double mutant (D52N/R367Q) of NT5C2-537X in the active state, Northeast Structural Genomics Target
Descriptor: Cytosolic purine 5'-nucleotidase, INOSINIC ACID
Authors:Forouhar, F, Dieck, C.L, Tzoneva, G, Carpenter, Z, Ambesi-Impiombato, A, Sanchez-Martin, M, Kirschner-Schwabe, R, Lew, S, Seetharaman, J, Ferrando, A.A, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2018-05-10
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure and Mechanisms of NT5C2 Mutations Driving Thiopurine Resistance in Relapsed Lymphoblastic Leukemia.
Cancer Cell, 34, 2018
6DF0
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BU of 6df0 by Molmil
anti-phosphotyrosine antibody 4G10-4D5 Fab complexed with sulfate
Descriptor: 4G10-4D5 Antibody Light chain, 4G10-4D5 Antibody heavy chain, SULFATE ION
Authors:Mou, K, Leung, K, Wells, J.A.
Deposit date:2018-05-13
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Engineering Improved Antiphosphotyrosine Antibodies Based on an Immunoconvergent Binding Motif.
J. Am. Chem. Soc., 140, 2018
2L1U
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BU of 2l1u by Molmil
Structure-Functional Analysis of Mammalian MsrB2 protein
Descriptor: Methionine-R-sulfoxide reductase B2, mitochondrial, ZINC ION
Authors:Aachmann, F.L, Del Conte, R, Kwak, G, Kim, H, Gladyshev, V.N, Dikiy, A.
Deposit date:2010-08-06
Release date:2010-08-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure-Functional Analysis of Mammalian MsrB2 protein
To be Published
5U65
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BU of 5u65 by Molmil
Camel Nanobody VHH-5
Descriptor: SULFATE ION, VHH-5
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2016-12-07
Release date:2017-09-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Selection of nanobodies with broad neutralizing potential against primary HIV-1 strains using soluble subtype C gp140 envelope trimers.
Sci Rep, 7, 2017
3EOQ
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BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
Descriptor: Putative zinc protease
Authors:Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2008-09-29
Release date:2009-03-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
6DHS
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BU of 6dhs by Molmil
Structure of hnRNP H qRRM1,2
Descriptor: Heterogeneous nuclear ribonucleoprotein H
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2018-05-21
Release date:2018-09-12
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Differential Conformational Dynamics Encoded by the Inter-qRRM linker of hnRNP H.
J. Am. Chem. Soc., 2018
5B47
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BU of 5b47 by Molmil
2-Oxoacid:Ferredoxin Oxidoreductase 2 from Sulfolobus tokodai - pyruvate complex
Descriptor: 2-oxoacid--ferredoxin oxidoreductase alpha subunit, 2-oxoacid--ferredoxin oxidoreductase beta subunit, IRON/SULFUR CLUSTER, ...
Authors:Yan, Z, Maruyama, A, Arakawa, T, Fushinobu, S, Wakagi, T.
Deposit date:2016-04-01
Release date:2016-09-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii
Sci Rep, 6, 2016
6D51
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BU of 6d51 by Molmil
Crystal structure of L,D-transpeptidase 3 from Mycobacterium tuberculosis in complex with a faropenem-derived adduct
Descriptor: ACETYL GROUP, CALCIUM ION, Probable L,D-transpeptidase 3
Authors:Libreros, G.A, Dias, M.V.B.
Deposit date:2018-04-19
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis for the Interaction and Processing of beta-Lactam Antibiotics by l,d-Transpeptidase 3 (LdtMt3) from Mycobacterium tuberculosis.
ACS Infect Dis, 5, 2019
4TRQ
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BU of 4trq by Molmil
Crystal structure of Sac3/Thp1/Sem1
Descriptor: 26S proteasome complex subunit SEM1, Nuclear mRNA export protein SAC3, Nuclear mRNA export protein THP1, ...
Authors:Hellerschmied, D, Schneider, S, Kohler, A, Clausen, T.
Deposit date:2014-06-17
Release date:2015-08-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Nuclear Pore-Associated TREX-2 Complex Employs Mediator to Regulate Gene Expression.
Cell, 162, 2015

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PDB entries from 2024-10-16

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