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PDB: 89111 results

4Z88
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BU of 4z88 by Molmil
SH3-II of Drosophila Rim-binding protein with Aplip1 peptide
Descriptor: JNK-interacting protein 1, PHOSPHATE ION, RIM-binding protein, ...
Authors:Driller, J.H, Holton, N, Siebert, M, Boehme, M.A, Wahl, M.C, Sigrist, S.J, Loll, B.
Deposit date:2015-04-08
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A high affinity RIM-binding protein/Aplip1 interaction prevents the formation of ectopic axonal active zones.
Elife, 4, 2015
7JR2
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BU of 7jr2 by Molmil
Crystal structure of the R64M mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Bovine Trypsin
Descriptor: Cationic trypsin, Kunitz-type inihibitor, SULFATE ION
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-11
Release date:2021-07-21
Last modified:2021-08-11
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI.
Acta Crystallogr D Struct Biol, 77, 2021
5V88
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Structure of DCN1 bound to NAcM-COV
Descriptor: Lysozyme,DCN1-like protein 1, N-{2-[({1-[(2R)-pentan-2-yl]piperidin-4-yl}{[3-(trifluoromethyl)phenyl]carbamoyl}amino)methyl]phenyl}propanamide
Authors:Guy, R.K, Schulman, B.A, Scott, D.C, Hammill, J.T.
Deposit date:2017-03-21
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase.
Nat. Chem. Biol., 13, 2017
7JOS
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BU of 7jos by Molmil
Crystal structure of BbKI complexed with Human Kallikrein 4
Descriptor: Kallikrein 4 (Prostase, enamel matrix, prostate), ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-07
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021
4TZ2
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BU of 4tz2 by Molmil
Fragment-Based Screening of the Bromodomain of ATAD2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-(5-phenyl-4H-1,2,4-triazol-3-yl)aniline, ATPase family AAA domain-containing protein 2, ...
Authors:Harner, M.J, Chauder, B.A, Phan, J, Fesik, S.W.
Deposit date:2014-07-09
Release date:2014-10-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fragment-Based Screening of the Bromodomain of ATAD2.
J.Med.Chem., 57, 2014
5L8T
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BU of 5l8t by Molmil
Crystal Structure of BAZ2B bromodomain in complex with 3-amino-2-methylpyridine derivative 2
Descriptor: Bromodomain adjacent to zinc finger domain protein 2B, ~{N}-[(3~{R})-1,1-bis(oxidanylidene)thian-3-yl]-2-methyl-pyridin-3-amine
Authors:Lolli, G, Marchand, J.-R, Caflisch, A.
Deposit date:2016-06-08
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Derivatives of 3-Amino-2-methylpyridine as BAZ2B Bromodomain Ligands: In Silico Discovery and in Crystallo Validation.
J. Med. Chem., 59, 2016
8H4X
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BU of 8h4x by Molmil
Structure of cleaved Serpin B9
Descriptor: 1,2-ETHANEDIOL, Serpin B9, ZINC ION
Authors:Zhou, A, Yan, T.
Deposit date:2022-10-11
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Expression, purification and crystallization of cleaved Serpin B9
To Be Published
6BS4
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BU of 6bs4 by Molmil
Crystal structure of ATPgammaS-bound bacterial Get3-like A and B in Mycobacterium tuberculosis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Anion transporter, MAGNESIUM ION, ...
Authors:Li, H, Hu, K, Kovach, A.
Deposit date:2017-12-01
Release date:2019-05-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of Guided Entry of Tail-Anchored Proteins 3 Homologues in Mycobacterium tuberculosis.
J.Bacteriol., 201, 2019
4TVR
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BU of 4tvr by Molmil
Tandem Tudor and PHD domains of UHRF2
Descriptor: E3 ubiquitin-protein ligase UHRF2, UNKNOWN ATOM OR ION, ZINC ION
Authors:Walker, J.R, Dong, A, Zhang, Q, Ong, M, Duan, S, Li, Y, Bountra, C, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2014-06-27
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of the Tandem Tudor and PHD domains of UHRF2
To be published
6E51
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BU of 6e51 by Molmil
Crystal structure of the apo domain-swapped dimer Q108K:K40L:T51W mutant of human cellular retinol binding protein II
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2018-07-19
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.256 Å)
Cite:Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019
3JZU
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BU of 3jzu by Molmil
Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583 complexed with Mg and dipeptide L-Leu-L-Tyr
Descriptor: Dipeptide Epimerase, LEUCINE, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Imker, H.J, Sakai, A, Gerlt, J.A, Almo, S.C.
Deposit date:2009-09-24
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
5KPG
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BU of 5kpg by Molmil
Pavine N-methyltransferase in complex with S-adenosylhomocysteine pH 7
Descriptor: Pavine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Torres, M.A, Hoffarth, E, Eugenio, L, Savtchouk, J, Chen, X, Morris, J, Facchini, P.J, Ng, K.K.S.
Deposit date:2016-07-04
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Functional Studies of Pavine N-Methyltransferase from Thalictrum flavum Reveal Novel Insights into Substrate Recognition and Catalytic Mechanism.
J.Biol.Chem., 291, 2016
5VCM
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BU of 5vcm by Molmil
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound UDP and Manganese
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, ...
Authors:Sanders, J.H, Kadirvelraj, R, Wood, Z.A.
Deposit date:2017-03-31
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:HumanN-acetylglucosaminyltransferase II substrate recognition uses a modular architecture that includes a convergent exosite.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6E2A
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BU of 6e2a by Molmil
Crystal structure of NADH:quinone reductase PA1024 from Pseudomonas aeruginosa PAO1 in complex with NAD+
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Reis, R.A.G, Ball, J, Agniswamy, J, Weber, I, Gadda, G.
Deposit date:2018-07-10
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Steric hindrance controls pyridine nucleotide specificity of a flavin-dependent NADH:quinone oxidoreductase.
Protein Sci., 28, 2019
6R60
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BU of 6r60 by Molmil
asymmetric antiparallel assembly of two 5-bladed beta-propeller fragments
Descriptor: WD-40 repeat protein
Authors:Afanasieva, E, Lupas, A.N, Hartmann, M.D.
Deposit date:2019-03-26
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural diversity of oligomeric beta-propellers with different numbers of identical blades.
Elife, 8, 2019
3JDW
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BU of 3jdw by Molmil
CRYSTAL STRUCTURE AND MECHANISM OF L-ARGININE: GLYCINE AMIDINOTRANSFERASE: A MITOCHONDRIAL ENZYME INVOLVED IN CREATINE BIOSYNTHESIS
Descriptor: L-ARGININE:GLYCINE AMIDINOTRANSFERASE, L-ornithine
Authors:Humm, A, Fritsche, E, Steinbacher, S, Huber, R.
Deposit date:1997-01-24
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and mechanism of human L-arginine:glycine amidinotransferase: a mitochondrial enzyme involved in creatine biosynthesis.
EMBO J., 16, 1997
4TZT
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BU of 4tzt by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYL REDUCTASE (INHA) COMPLEXED WITH N-(3-CHLORO-2-METHYLPHENYL)-1-CYCLOHEXYL- 5-OXOPYRROLIDINE-3-CARBOXAMIDE
Descriptor: (3S)-N-(3-CHLORO-2-METHYLPHENYL)-1-CYCLOHEXYL-5-OXOPYRROLIDINE-3-CARBOXAMIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, X, Alian, A, Stroud, R.M, Ortiz de Montellano, P.R.
Deposit date:2014-07-10
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis
J. Med. Chem., 2006
8EZG
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BU of 8ezg by Molmil
Monobody 12D1 bound to KRAS(G12D)
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S.
Deposit date:2022-10-31
Release date:2023-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors.
Proc.Natl.Acad.Sci.USA, 120, 2023
6R7F
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BU of 6r7f by Molmil
Structural basis of Cullin-2 RING E3 ligase regulation by the COP9 signalosome
Descriptor: COP9 signalosome complex subunit 1, COP9 signalosome complex subunit 2, COP9 signalosome complex subunit 3, ...
Authors:Faull, S.V, Lau, A.M.C, Martens, C, Ahdash, Z, Yebenes, H, Schmidt, C, Beuron, F, Cronin, N.B, Morris, E.P, Politis, A.
Deposit date:2019-03-28
Release date:2019-08-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Structural basis of Cullin 2 RING E3 ligase regulation by the COP9 signalosome.
Nat Commun, 10, 2019
6E5C
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BU of 6e5c by Molmil
Solution NMR structure of a de novo designed double-stranded beta-helix
Descriptor: De novo beta protein
Authors:Marcos, E, Chidyausiku, T.M, McShan, A, Evangelidis, T, Nerli, S, Sgourakis, N, Tripsianes, K, Baker, D.
Deposit date:2018-07-19
Release date:2018-11-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:De novo design of a non-local beta-sheet protein with high stability and accuracy.
Nat. Struct. Mol. Biol., 25, 2018
5KRA
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BU of 5kra by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with DDT and DDE
Descriptor: 1-[2,2-bis(chloranyl)-1-(4-chlorophenyl)ethenyl]-4-chloranyl-benzene, 1-chloranyl-4-[2,2,2-tris(chloranyl)-1-(4-chlorophenyl)ethyl]benzene, Estrogen receptor, ...
Authors:Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-07-07
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
5UVD
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BU of 5uvd by Molmil
Crystal structure of an antigenic nucleotidyltransferase-like protein from Paracoccidioides brasiliensis
Descriptor: MAGNESIUM ION, Nucleotidyltransferase-like protein
Authors:Nagem, R.A.P, Costa, M.A.F, Rodrigues, F.T.G, Coitinho, J.B.C.
Deposit date:2017-02-20
Release date:2018-01-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural and immunological characterization of a new nucleotidyltransferase-like antigen from Paracoccidioides brasiliensis.
Mol.Immunol., 112, 2019
5AQJ
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BU of 5aqj by Molmil
Fragment-based screening of HSP70 sheds light on the functional role of ATP-binding site residues
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 9H-purine-6,8-diamine, BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1, ...
Authors:Jones, A.M, Westwood, I.M, Osborne, J.D, Matthews, T.P, Cheeseman, M.D, Rowlands, M.G, Jeganathan, F, Burke, R, Lee, D, Kadi, N, Liu, M, Richards, M, McAndrew, C, Yahya, N, Dobson, S.E, Jones, K, Workman, P, Collins, I, van Montfort, R.L.M.
Deposit date:2015-09-22
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:A fragment-based approach applied to a highly flexible target: Insights and challenges towards the inhibition of HSP70 isoforms.
Sci Rep, 6, 2016
5AQE
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BU of 5aqe by Molmil
Cooperative bio-metallic selectivity in a tailored protease enables creation of a C-C cross-coupling Heckase
Descriptor: (4-VINYLPHENYL)METHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Sharma, M, Diaz-Rodriguez, A, Offen, W.A, Palm-Espling, M.E, Pordea, A, Wormald, M.R, Mcdonough, M, Davies, G.J, Davis, B.G.
Deposit date:2015-09-22
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Bisubstrate Localisation by a Tailored Serine Protease Allows Creation of a Heck-Ase
To be Published
8UMC
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BU of 8umc by Molmil
Deinococcus aerius TR0125 C-glucosyl deglycosidase (CGD), cryo-EM
Descriptor: DUF6379 domain-containing protein, MANGANESE (II) ION, Xylose isomerase-like TIM barrel domain-containing protein
Authors:Furlanetto, V, Kalyani, D.C, Kostelac, A, Haltrich, D, Hallberg, B.M, Divne, C.
Deposit date:2023-10-17
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural and Functional Characterization of a Gene Cluster Responsible for Deglycosylation of C-glucosyl Flavonoids and Xanthonoids by Deinococcus aerius.
J.Mol.Biol., 436, 2024

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PDB entries from 2024-09-11

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