Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7ZND
DownloadVisualize
BU of 7znd by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the M state at pH 7.6 in the absence of sodium at 100K
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.985 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZN8
DownloadVisualize
BU of 7zn8 by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 7.0 in the presence of sodium at 100K
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZNC
DownloadVisualize
BU of 7znc by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 7.6 in the absence of sodium at 100K
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZNE
DownloadVisualize
BU of 7zne by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 8.2 at room temperature, 7.5-ms-long snapshots
Descriptor: EICOSANE, OLEIC ACID, PHOSPHATE ION, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZNG
DownloadVisualize
BU of 7zng by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 8.2 at room temperature, 500-mks-long snapshots
Descriptor: EICOSANE, OLEIC ACID, PHOSPHATE ION, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZNH
DownloadVisualize
BU of 7znh by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the activated state at pH 8.2 at room temperature, 250-750-mks-snapshot
Descriptor: EICOSANE, OLEIC ACID, PHOSPHATE ION, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZNI
DownloadVisualize
BU of 7zni by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the activated state at pH 8.2 at room temperature, 7.5-15-ms-snapshot
Descriptor: EICOSANE, OLEIC ACID, PHOSPHATE ION, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7B83
DownloadVisualize
BU of 7b83 by Molmil
Structure of SARS-CoV-2 Main Protease bound to pyrithione zinc
Descriptor: 3C-like proteinase, 9-oxa-7-thia-1-azonia-8$l^{2}-zincabicyclo[4.3.0]nona-1,3,5-triene, CHLORIDE ION, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-12-12
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
4D17
DownloadVisualize
BU of 4d17 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with its 5-peroxoisourate intermediate (X-ray dose, 106 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(HYDRO)PEROXOISOURATE, OXYGEN MOLECULE, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-11-05
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4CW3
DownloadVisualize
BU of 4cw3 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with the 5-peroxo derivative of 9-metyl uric acid (X-ray dose, 665 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione, 9-METHYL URIC ACID, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-04-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4D12
DownloadVisualize
BU of 4d12 by Molmil
Crystal Structure of Cofactor-free Urate Oxidase Anaerobically Complexed with Uric Acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, URIC ACID, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4CW6
DownloadVisualize
BU of 4cw6 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with the 5-peroxo derivative of 9-metyl uric acid (X-ray dose, 92 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione, 9-METHYL URIC ACID, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-04-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
7AQE
DownloadVisualize
BU of 7aqe by Molmil
Structure of SARS-CoV-2 Main Protease bound to UNC-2327
Descriptor: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Guenther, S, Reinke, P, Meents, A.
Deposit date:2020-10-21
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
4D13
DownloadVisualize
BU of 4d13 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with its 5-peroxoisourate intermediate (X-ray dose, 2.2 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(HYDRO)PEROXOISOURATE, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4CW0
DownloadVisualize
BU of 4cw0 by Molmil
Crystal structure of cofactor-free urate oxidase anaerobically complexed with 9-methyl uric acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 9-METHYL URIC ACID, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-03-31
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4D19
DownloadVisualize
BU of 4d19 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with its 5-peroxoisourate intermediate (X-ray dose, 1.75 MGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(HYDRO)PEROXOISOURATE, OXYGEN MOLECULE, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4CW2
DownloadVisualize
BU of 4cw2 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with the 5-peroxo derivative of 9-metyl uric acid (X-ray dose, 2.5 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-04-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
6QQ8
DownloadVisualize
BU of 6qq8 by Molmil
Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 290 kGy
Descriptor: Green fluorescent protein
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQD
DownloadVisualize
BU of 6qqd by Molmil
Cryogenic temperature structure of Hen Egg White Lysozyme recorded after an accumulated dose of 10 MGy
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQA
DownloadVisualize
BU of 6qqa by Molmil
Room temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 21 kGy
Descriptor: Green fluorescent protein
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQF
DownloadVisualize
BU of 6qqf by Molmil
Room temperature structure of Hen Egg White Lysozyme recorded after an accumulated dose of 100 kGy
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQB
DownloadVisualize
BU of 6qqb by Molmil
Room temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 147 kGy
Descriptor: Green fluorescent protein
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQH
DownloadVisualize
BU of 6qqh by Molmil
Cryogenic temperature structure of the ground state of AtPhot2LOV2 recorded after an accumulated dose of 2.68 MGy
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Aumonier, S, Gotthard, G, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQ9
DownloadVisualize
BU of 6qq9 by Molmil
Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 5.8 MGy
Descriptor: CARBON DIOXIDE, Green fluorescent protein
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QQE
DownloadVisualize
BU of 6qqe by Molmil
Room temperature structure of Hen Egg White Lysozyme recorded after an accumulated dose of 20 kGy
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon