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2GVR
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BU of 2gvr by Molmil
Crystal structure of the berenil-D(CGCGAATTCGCG)2 complex at 1.65 A resolution.
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BERENIL, MAGNESIUM ION
著者Lee, M.P.H, Parkinson, G.N, Neidle, S.
登録日2006-05-03
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the berenil-D(CGCGAATTCGCG)2 complex at 1.65 A resolution.
To be Published
2GWQ
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BU of 2gwq by Molmil
Crystal structure of D(G4T4G4) with four quadruplexes in the asymmetric unit.
分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
著者Lee, M.P.H, Parkinson, G.N, Neidle, S.
登録日2006-05-05
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of D(G4T4G4) with four and six quadruplexes in the asymmetric unit.
To be Published
2I08
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BU of 2i08 by Molmil
Solvation effect in conformational changes of EF-hand proteins: X-ray structure of Ca2+-saturated double mutant Q41L-K75I of N-domain of calmodulin
分子名称: CALCIUM ION, Calmodulin, GLYCEROL
著者Ababou, A, Parkinson, G.N, Desjarlais, J.R, Djordjevic, S.
登録日2006-08-10
公開日2007-08-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Solvation effect in conformational changes of EF-hand proteins: X-ray structure of double mutant Q41L-K75I of N-domain of calmodulin
To be Published
3CE5
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BU of 3ce5 by Molmil
A bimolecular parallel-stranded human telomeric quadruplex in complex with a 3,6,9-trisubstituted acridine molecule BRACO19
分子名称: 9-[4-(n,n-dimethylamino)phenylamino]-3,6-bis(3-pyrrolidinopropionamido) acridine, DNA (5'-D(*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3'), POTASSIUM ION
著者Campbell, N.H, Parkinson, G.N, Reszka, A.P, Neidle, S.
登録日2008-02-28
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of DNA quadruplex recognition by an acridine drug.
J.Am.Chem.Soc., 130, 2008
1RUN
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BU of 1run by Molmil
CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*G )-3'), DNA (5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3'), ...
著者Parkinson, G.N, Gunasekera, A, Vojtechovsky, J, Zhang, X, Kunkel, T.A, Berman, H.M, Ebright, R.H.
登録日1996-05-26
公開日1997-01-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Aromatic hydrogen bond in sequence-specific protein DNA recognition.
Nat.Struct.Biol., 3, 1996
1RUO
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BU of 1ruo by Molmil
CATABOLITE GENE ACTIVATOR PROTEIN (CAP) MUTANT/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*G )-3'), DNA (5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3'), ...
著者Parkinson, G.N, Ebright, R.H, Berman, H.M.
登録日1996-05-26
公開日1997-01-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Aromatic hydrogen bond in sequence-specific protein DNA recognition.
Nat.Struct.Biol., 3, 1996
1DS7
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BU of 1ds7 by Molmil
A MINOR FMN-DEPENDENT NITROREDUCTASE FROM ESCHERICHIA COLI B
分子名称: FLAVIN MONONUCLEOTIDE, FMN-DEPENDENT NITROREDUCTASE
著者Parkinson, G, Skelly, J, Neidle, S.
登録日2000-01-07
公開日2000-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structure of FMN-dependent nitroreductase from Escherichia coli B: a prodrug-activating enzyme.
J.Med.Chem., 43, 2000
4L0A
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BU of 4l0a by Molmil
X-ray structure of an all LNA quadruplex
分子名称: DNA/RNA (5'-R(*(TLN)P*(LCG)P*(LCG)P*(LCG)P*(TLN))-3'), GLYCEROL, POTASSIUM ION
著者Russo Krauss, I, Parkinson, G, Merlino, A, Mazzarella, L, Sica, F.
登録日2013-05-31
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A regular thymine tetrad and a peculiar supramolecular assembly in the first crystal structure of an all-LNA G-quadruplex.
Acta Crystallogr.,Sect.D, 70, 2014
6JJE
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BU of 6jje by Molmil
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex (BrU)
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*(BRU)P*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), POTASSIUM ION, ...
著者Zhang, Y.S, Wei, D.G.
登録日2019-02-25
公開日2020-02-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.378 Å)
主引用文献Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex (BrU)
To Be Published
6JJG
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BU of 6jjg by Molmil
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
分子名称: DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), POTASSIUM ION, SODIUM ION
著者Zhang, Y.S, Wei, D.G.
登録日2019-02-25
公開日2020-02-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
To Be Published
4H29
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BU of 4h29 by Molmil
B-raf dimer DNA quadruplex
分子名称: DNA (5'-D(*GP*GP*GP*CP*GP*GP*GP*GP*AP*GP*GP*GP*GP*GP*AP*AP*GP*GP*GP*A)-3'), POTASSIUM ION
著者Wei, D, Parkinson, G, Neidle, S.
登録日2012-09-12
公開日2013-07-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Crystal Structure of a Promoter Sequence in the B-raf Gene Reveals an Intertwined Dimer Quadruplex.
J.Am.Chem.Soc., 135, 2013
3EM2
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BU of 3em2 by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6038
分子名称: 3,6-Bis[(3-morpholinopropionamido)] acridine, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-09-23
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3EQW
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BU of 3eqw by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6042 in small unit cell
分子名称: 3,6-Bis{3-[(2R)-(2-ethylpiperidino)]propionamido}acridine, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-10-01
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3ET8
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BU of 3et8 by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6054
分子名称: 3,6-Bis{3-(3-[(3R)-methylpiperidino)]propionamido}acridine, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-10-07
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3EUM
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BU of 3eum by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6066
分子名称: 3,6-Bis[3-(azepan-1-yl)propionamido]acridine, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-10-10
公開日2008-10-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3ERU
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BU of 3eru by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6045
分子名称: 3,6-Bis{3-[(2R)-2-methylpiperidino)]propionamido}acridine, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-10-03
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3EUI
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BU of 3eui by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6042 in a large unit cell
分子名称: 3,6-Bis{3-[(2R)-(2-ethylpiperidino)]propionamido}acridine, 3-[(2R)-2-ethylpiperidin-1-yl]-N-[6-({3-[(2S)-2-ethylpiperidin-1-yl]propanoyl}amino)acridin-3-yl]propanamide, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', ...
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-10-10
公開日2008-12-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3ES0
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BU of 3es0 by Molmil
A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6048
分子名称: 3,6-Bis[3-(4-methylpiperidino)propionamido]acridine, 5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION
著者Campbell, N.H, Parkinson, G, Neidle, S.
登録日2008-10-03
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
1JRN
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BU of 1jrn by Molmil
Orthorhombic form of Oxytricha telomeric DNA at 2.0A
分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
著者Haider, S.M, Parkinson, G, Neidle, S.
登録日2001-08-14
公開日2002-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the potassium form of an Oxytricha nova G-quadruplex.
J.Mol.Biol., 320, 2002
1JPQ
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BU of 1jpq by Molmil
Crystal Structure of the Oxytricha Telomeric DNA at 1.6A
分子名称: 5'-D(*GP*GP*GP*GP*(BRU)P*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
著者Haider, S.M, Parkinson, G, Neidle, S.
登録日2001-08-03
公開日2002-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the potassium form of an Oxytricha nova G-quadruplex.
J.Mol.Biol., 320, 2002
1O3S
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BU of 1o3s by Molmil
PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
分子名称: 5'-D(*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
著者Chen, S, Ebright, R.H, Berman, H.M.
登録日2003-03-18
公開日2003-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: Alteration of DNA Binding Specificity Through Alteration of DNA Kinking
J.Mol.Biol., 314, 2001
<123

 

220113

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